BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20834 (713 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AK172839-1|BAD18804.1| 473|Homo sapiens protein ( Homo sapiens ... 31 4.1 AJ295977-1|CAC14125.1| 80|Homo sapiens immunoglobulin heavy ch... 30 9.5 AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 30 9.5 >AK172839-1|BAD18804.1| 473|Homo sapiens protein ( Homo sapiens cDNA FLJ24000 fis, clone KAIA1329, highly similar to Homo sapiens cAMP responsive element binding protein 3-like 3 ). Length = 473 Score = 31.1 bits (67), Expect = 4.1 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -3 Query: 651 QVREEEWVNGPRKHGSQSCRPSSGRCKLCHQLQCKSTSPFSPGLP 517 QV +WV +H ++CR G + C Q + P PG+P Sbjct: 392 QVAPLDWVAPGPEHWLRTCRAGGGGRRACEPRQDYAPRPLCPGVP 436 >AJ295977-1|CAC14125.1| 80|Homo sapiens immunoglobulin heavy chain variable region protein. Length = 80 Score = 29.9 bits (64), Expect = 9.5 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = -3 Query: 219 GFHWIGGLWFEGAYELYALAAVLRSKLLLSR 127 G W+ +W++G+Y+ Y AA ++ + +SR Sbjct: 14 GLEWVAVIWYDGSYKYY--AASVKGRFTISR 42 >AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4 protein. Length = 1362 Score = 29.9 bits (64), Expect = 9.5 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Frame = +2 Query: 215 KPQNTWNA-PPKPIRR*TLIPK-TITPPLKTHTILRIPMHLL--KTPIVPPGARLHIRLR 382 +P N A PPKP R + P T TP L + + P LL + P PP + ++L Sbjct: 872 RPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLY 931 Query: 383 LQQL 394 LQQL Sbjct: 932 LQQL 935 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 105,323,044 Number of Sequences: 237096 Number of extensions: 2467243 Number of successful extensions: 9188 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 8309 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9137 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8343197486 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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