Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20834
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 40 0.002
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 38 0.007
At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 33 0.14
At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 33 0.14
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 33 0.19
At2g27090.1 68415.m03255 expressed protein contains Pfam domains... 32 0.43
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 32 0.43
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 31 0.76
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 31 0.76
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 1.0
At5g10730.1 68418.m01243 expressed protein 31 1.0
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 31 1.0
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 31 1.0
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 29 2.3
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 3.1
At3g21215.1 68416.m02681 RNA-binding protein, putative contains ... 29 3.1
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 29 4.0
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 28 7.1
At2g21140.1 68415.m02508 hydroxyproline-rich glycoprotein family... 28 7.1
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik... 28 7.1
At5g63530.1 68418.m07974 copper chaperone (CCH)-related low simi... 27 9.3
At4g34440.1 68417.m04894 protein kinase family protein contains ... 27 9.3
At4g28030.1 68417.m04021 GCN5-related N-acetyltransferase (GNAT)... 27 9.3
At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family... 27 9.3
At3g20850.1 68416.m02636 proline-rich family protein contains pr... 27 9.3
At3g05545.1 68416.m00609 transcription factor, putative / zinc f... 27 9.3
At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar... 27 9.3
At2g39850.1 68415.m04894 subtilase family protein contains simil... 27 9.3
At1g67140.1 68414.m07638 expressed protein 27 9.3
At1g07310.1 68414.m00778 C2 domain-containing protein contains s... 27 9.3
At1g01510.1 68414.m00067 C-terminal binding protein (ANGUSTIFOLI... 27 9.3
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 178 VRTFEPEPAYPVETSKYVERSTQADPPINTYPQ-NNYAPPQNSYYPQNTYAPPQNTY 345
++ + P YP KY + Q PPI YP Y PP Y P Y PP Y
Sbjct: 150 IKKYPPPEHYPPPIKKYPPQE-QYPPPIKKYPPPEKYPPPIKKYPPPEQYPPPIKKY 205
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 187 FEPEPAYPVETSKYVERSTQADPPINTYPQ-NNYAPPQNSYYPQNTYAPPQNTY 345
+ P YP KY Q PPI YP Y+PP Y P Y PP Y
Sbjct: 101 YPPPEQYPPPIKKYPPPE-QYPPPIKKYPPPEQYSPPFKKYPPPEQYPPPIKKY 153
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 178 VRTFEPEPAYPVETSKYVERSTQADPPINTYPQ-NNYAPPQNSYYPQNTYAPPQNTY 345
++ + P Y KY Q PPI YP +Y PP Y PQ Y PP Y
Sbjct: 124 IKKYPPPEQYSPPFKKYPPPE-QYPPPIKKYPPPEHYPPPIKKYPPQEQYPPPIKKY 179
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +1
Query: 181 RTFEPEPAYPVETSKYVERSTQADPPINTYP-QNNYAPPQNSYYPQNTYAPPQNTY 345
+ + P YP KY PPI YP Q Y PP Y P Y PP Y
Sbjct: 138 KKYPPPEQYPPPIKKYPPPE-HYPPPIKKYPPQEQYPPPIKKYPPPEKYPPPIKKY 192
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +1
Query: 178 VRTFEPEPAYPVETSKYVERSTQADPPINTYPQ-NNYAPPQNSYYPQNTYAPPQNTY 345
++ + P YP KY Q PP YP Y PP Y P Y PP Y
Sbjct: 111 IKKYPPPEQYPPPIKKYPPPE-QYSPPFKKYPPPEQYPPPIKKYPPPEHYPPPIKKY 166
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/56 (35%), Positives = 23/56 (41%)
Frame = +1
Query: 178 VRTFEPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 345
++ + P YP KY Q PPI YP PP Y P Y PP TY
Sbjct: 176 IKKYPPPEKYPPPIKKYPPPE-QYPPPIKKYP-----PPIKKYPPPEEYPPPIKTY 225
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +1
Query: 193 PEPAYPVETSKYVERSTQADPPINTYPQ-NNYAPPQNSYYPQNTYAPPQNTY 345
P YP KY Q PPI YP Y PP Y P Y+PP Y
Sbjct: 90 PIKTYPHPPVKYPPPE-QYPPPIKKYPPPEQYPPPIKKYPPPEQYSPPFKKY 140
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +1
Query: 193 PEPAYPVETSKYVER-STQADPPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 345
P P Y KY T PP+ P Y PP Y P Y PP Y
Sbjct: 76 PPPPYEHPPVKYPPPIKTYPHPPVKYPPPEQYPPPIKKYPPPEQYPPPIKKY 127
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 178 VRTFEPEPAYPVETSKYVERSTQADPPINTYPQ-NNYAPPQNSYYPQNTYAPPQNTY 345
++ + P+ YP KY + PPI YP Y PP Y P PP Y
Sbjct: 163 IKKYPPQEQYPPPIKKYPPPE-KYPPPIKKYPPPEQYPPPIKKYPPPIKKYPPPEEY 218
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Frame = +1
Query: 193 PEPAYPVETSKYVER--STQADPPINTYPQNNYAPPQNSYY---PQNTYAPP 333
P YP KY T PPI TYP PP +Y P+ Y PP
Sbjct: 221 PIKTYPHPPVKYPPPPYKTYPHPPIKTYPPPKECPPPPEHYPWPPKKKYPPP 272
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Frame = +1
Query: 178 VRTFEPEPAYPVETSKY---VER---STQADPPINTYPQN--NYAPPQNSYYPQ---NTY 324
++ + P YP KY +++ + PPI TYP Y PP YP TY
Sbjct: 189 IKKYPPPEQYPPPIKKYPPPIKKYPPPEEYPPPIKTYPHPPVKYPPPPYKTYPHPPIKTY 248
Query: 325 APPQ 336
PP+
Sbjct: 249 PPPK 252
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +1
Query: 178 VRTFEPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 345
+ + P YP KY + P P Y P Y P Y PP Y
Sbjct: 59 IEKYPPPVQYPPPIKKYPPPPYEHPPVKYPPPIKTYPHPPVKYPPPEQYPPPIKKY 114
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 187 FEPEPAYPVETSKYVERSTQADPPI-NTYPQNNYAPPQNSYYPQNTYAPPQNTY 345
+ P YP + S Y ST PPI + YP PP +S YP Y PPQ +Y
Sbjct: 184 YPPASGYPPQPSAYPPPSTSGYPPIPSAYP----PPPPSSAYPPQPY-PPQPSY 232
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 187 FEPEP-AYPV-ETSKY--VERSTQADPPINTYPQNNYAPPQNSYYPQNTY 324
+ P+P AYP TS Y + + PP + YP Y PPQ SYYPQ Y
Sbjct: 190 YPPQPSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPY-PPQPSYYPQGPY 238
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 253 PPINTYPQNNYAPPQNSYYPQNTYAPPQNT 342
P + YPQ + PP + Y PQ + PP +T
Sbjct: 173 PQVQQYPQPSGYPPASGYPPQPSAYPPPST 202
>At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 199
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 187 FEPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSY--YPQNTYAPP 333
+ P+ YP S Y + Q PP + YPQN PP ++Y YP Y PP
Sbjct: 150 YPPQQGYP--PSGYPQHPPQGYPP-SGYPQN---PPPSAYSQYPPGAYPPP 194
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 187 FEPEPAYPVETSKYVERSTQADPPINTY-PQNNYAPPQNSYYPQNTYAP---PQN 339
F P+P V ++ + R QA PP Y PQ Y P +P Y P PQN
Sbjct: 124 FGPQPM-AVPPAQQMSRFDQATPPAVGYPPQQGYPPSGYPQHPPQGYPPSGYPQN 177
>At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 255
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 187 FEPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSY--YPQNTYAPP 333
+ P+ YP S Y + Q PP + YPQN PP ++Y YP Y PP
Sbjct: 206 YPPQQGYP--PSGYPQHPPQGYPP-SGYPQN---PPPSAYSQYPPGAYPPP 250
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +1
Query: 187 FEPEPAYPVETSKYVERSTQADPPINTY-PQNNYAPPQNSYYPQNTYAP---PQN 339
F P+P V ++ + R QA PP Y PQ Y P +P Y P PQN
Sbjct: 180 FGPQPM-AVPPAQQMSRFDQATPPAVGYPPQQGYPPSGYPQHPPQGYPPSGYPQN 233
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 184 TFEPEPAYPVETSKYVERSTQADPPINT--YPQ--NNYAPPQNSYYPQNTYAPP 333
T P P PV Y TQ+ PP + YP N+ PP YYP TY+PP
Sbjct: 549 TQSPPPPSPV----YYPPVTQSPPPPSPVYYPPVTNSPPPPSPVYYPPVTYSPP 598
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +1
Query: 184 TFEPEPAYPVETSKYVERSTQADPPINT--YPQNNYAPPQNS--YYPQNTYAPP 333
T P P PV Y T + PP + YP Y+PP S YYPQ T +PP
Sbjct: 564 TQSPPPPSPV----YYPPVTNSPPPPSPVYYPPVTYSPPPPSPVYYPQVTPSPP 613
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 199 PAYPVETSKYVERSTQADPPINT--YPQNNYAPPQNS--YYPQNTYAPPQNT 342
P+ P + Y T + PP + YP +PP S YYP T +PP T
Sbjct: 625 PSPPPPSPVYYPPVTPSPPPPSPVYYPPVTPSPPPPSPVYYPSETQSPPPPT 676
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 172 QLVRTFEPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYY 309
Q ++EP P Y +S T PP+ + + PP SYY
Sbjct: 699 QATPSYEPPPEYSYSSSPPPPSPTSYFPPMPSVSYDASPPPPPSYY 744
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = +1
Query: 184 TFEPEPAYPVETSKYVERSTQADPPINT--YPQNNYAPPQNS--YYPQNTYAPP 333
T P P PV Y T + PP + YPQ +PP S YYP T +PP
Sbjct: 579 TNSPPPPSPV----YYPPVTYSPPPPSPVYYPQVTPSPPPPSPLYYPPVTPSPP 628
>At2g27090.1 68415.m03255 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 743
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +1
Query: 196 EPAYPVETSKYVERSTQADPPINTYPQN----NYAPPQNSYYPQNTYAPP 333
E PVE+S Y S + P+ ++ +Y+PP S+ +TY+PP
Sbjct: 57 ETEVPVESSLYTSTSATPEQPLALIEKSVSHLSYSPPPASHSHHDTYSPP 106
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 247 ADPPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 345
A PP YP Y PP + YP Y PP Y
Sbjct: 36 AYPPPGGYPPQGYPPPPHG-YPPAAYPPPPGAY 67
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 193 PEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPP 333
P P Y + + PP YP Y+PP YP Y+PP
Sbjct: 56 PPPVYSRPVAFPPPPPIYSPPPPPIYPPPIYSPPPPPIYPPPIYSPP 102
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PPIQ P +++ P KP T +PP+K + + P PI PP
Sbjct: 136 PPIQKPPTPSYSPPVKPPPVQMPPTPTYSPPIKPPPVHKPPTPTYSPPIKPP 187
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+Q P ++ P KP T +PP+K+ + + P PI PP
Sbjct: 271 PPVQTPPTPIYSPPVKPPPVHKPPTPTYSPPVKSPPVQKPPTPTYSPPIKPP 322
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 PPIQWKPQNTWNAP--PKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+Q P T++ P P P++ T I +PP+K + + P + P+ PP
Sbjct: 322 PPVQKPPTPTYSPPIKPPPVKPPTPI---YSPPVKPPPVHKPPTPIYSPPVKPP 372
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPPGARL 367
PP+ P T++ P KP T +PP+K + + P P+ PP +L
Sbjct: 624 PPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVQKPPTPTYSPPVKPPPVQL 679
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 PPIQWKPQNTWNAP--PKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PPIQ P T++ P P PI++ T +PP+ I + P PI PP
Sbjct: 85 PPIQKPPTPTYSPPIYPPPIQKPPT--PTYSPPIYPPPIQKPPTPTYSPPIYPP 136
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PPI P T++ P KP T +PP+K + + P PI PP
Sbjct: 556 PPIHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPP 607
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+ P T++ P KP T +PP+K + + P PI PP
Sbjct: 539 PPVHKPPTPTYSPPIKPPPIHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPP 590
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+ P T++ P KP T +PP+K + + P PI PP
Sbjct: 573 PPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPP 624
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+ P T++ P KP T +PP+K + + P PI PP
Sbjct: 590 PPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPVHKPPTPTYSPPIKPP 641
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+ P T++ P KP P +PP+K + + P + PI PP
Sbjct: 170 PPVHKPPTPTYSPPIKPPVHKPPTP-IYSPPIKPPPVHKPPTPIYSPPIKPP 220
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPK--PIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+Q P T++ P K P++ T I +PP+K + + P + P+ PP
Sbjct: 406 PPLQKPPTPTYSPPIKLPPVKPPTPI---YSPPVKPPPVHKPPTPIYSPPVKPP 456
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+ P T++ P KP +PP+K + + P + P+ PP
Sbjct: 220 PPVHKPPTPTYSPPVKPPPVHKPPTPIYSPPIKPPPVHKPPTPIYSPPVKPP 271
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+ P ++ P KP T +PP+K + + P + PI PP
Sbjct: 203 PPVHKPPTPIYSPPIKPPPVHKPPTPTYSPPVKPPPVHKPPTPIYSPPIKPP 254
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPK--PIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP+ P T++ P K P+++ T +PP+K + + P PI PP
Sbjct: 288 PPVHKPPTPTYSPPVKSPPVQKPPT--PTYSPPIKPPPVQKPPTPTYSPPIKPP 339
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 200 PPIQWKPQNTWNAPPKPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
PP++ P T++ P KP T +PP+K I + P PI PP
Sbjct: 523 PPVK-PPTPTYSPPIKPPPVHKPPTPTYSPPIKPPPIHKPPTPTYSPPIKPP 573
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 199 PAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPP 333
P P+ + ST A PP+ T P APP + P +PP
Sbjct: 5 PPLPILSPPSSNSSTTAPPPLQTQPTTPSAPPPVTPPPSPPQSPP 49
>At5g10730.1 68418.m01243 expressed protein
Length = 287
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +2
Query: 245 KPIRR*TLIPKTITPPLKTHTILRIPMHLLKTPIVPPG 358
KP+ + L+ TPP+ ++ ++ + P+ PPG
Sbjct: 234 KPLNQLPLVGPLFTPPVNVESVAKVAVRAATDPVFPPG 271
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 193 PEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPP 333
P PA PV T R Q P ++ P + PP ++ +P Y PP
Sbjct: 63 PPPAPPVGTM----RPGQPSPFVSQIPGSRPPPPSSNSFPSPAYGPP 105
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +1
Query: 181 RTFEPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPPQNTY 345
+T P YP + Y + ++ PP Q+ PP +YY + PP Y
Sbjct: 585 QTPSPREYYPSPSPPYYQYTSSPPPPTYYATQSPPPPPPPTYYAVQSPPPPPPVY 639
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 199 PAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPP 333
P PV S V +S PP+ P PP YYP T +PP
Sbjct: 662 PPPPVYYSP-VTQSPPPPPPVYYPPVTQSPPPSPVYYPPVTQSPP 705
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 208 PVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPP 333
P + Y +S PP Y + PP YYP T +PP
Sbjct: 607 PPPPTYYATQSPPPPPPPTYYAVQSPPPPPPVYYPPVTASPP 648
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 250 DPPINTYPQNNYAPPQNSYYPQNTYAPP 333
D P N YP + PP S YP N + PP
Sbjct: 221 DNPTNDYPA-DVPPPPPSSYPSNDHLPP 247
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 193 PEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPP 333
P+P P + S +R + P+N+ P Y+PP P ++PP
Sbjct: 501 PQPDDPYDQSPVTKRRSPPPAPVNSPPPPVYSPPPP---PPPVHSPP 544
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 193 PEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTYAPP 333
P P PV + S PP+ + P ++PP S P Y+PP
Sbjct: 596 PPPPAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPP-SQSPPVVYSPP 641
>At3g21215.1 68416.m02681 RNA-binding protein, putative contains RNA
recognition motif, Pfam:PF00076; contains AT-AC splice
sites at intron 8
Length = 339
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 603 GYHAYGDHLPTPPPVPAAIQAALDQNAKE 689
GYHA +PTPPP+ A QN K+
Sbjct: 200 GYHAPPVPMPTPPPIAAPSSYVPVQNIKD 228
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +1
Query: 247 ADPPINTYPQNNYAPPQNSY----YPQNTYAPPQNTY 345
A PP YPQ Y PP +Y YP Y P Y
Sbjct: 26 AYPPAG-YPQQGYPPPPGAYPPAGYPPGAYPPAPGGY 61
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 29 LILIVAAFLAVTFADNVE-SDKEIEDSEAAESV 124
L++ + ++VTFADNVE K++E S+ + V
Sbjct: 12 LLVTLGVVISVTFADNVELKSKDLESSKKDKKV 44
>At2g21140.1 68415.m02508 hydroxyproline-rich glycoprotein family
protein identical to proline-rich protein 2 [Arabidopsis
thaliana] gi|7620011|gb|AAF64549
Length = 321
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 212 WKPQNTWNAPPKPIRR*-TLIPKTITPPLKTHTILRIPMHLLKTPIVPP 355
+KP PP PI + +IPK PP I + P+ + K P+V P
Sbjct: 209 YKPPVPIYKPPVPIYKPPVVIPKKPCPPKIHKPIYKPPVPIYKPPVVIP 257
>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
protein, putative similar to cold-regulated gene SRC2
[Glycine max] GI:2055230; contains Pfam profile PF00168:
C2 domain; identical to cDNA src2-like protein
GI:3426059
Length = 324
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +1
Query: 187 FEPEPAYPVETSKYVERSTQADPPINTYP-QNNYAPPQNSYYPQNTYAPPQ 336
+ P AYP + Y Q YP Q Y PQ Y PQ Y PQ
Sbjct: 215 YPPPGAYP-QQGGYPGYPPQQQGGYPGYPPQGPYGYPQQGYPPQGPYGYPQ 264
>At5g63530.1 68418.m07974 copper chaperone (CCH)-related low
similarity to copper homeostasis factor [GI:3168840];
nearly identical to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 355
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 579 VHYWADKTGYHAYGDHL-PTPPPVPAAIQAALDQNAKEE 692
V Y +TG HA + P PPP P AA + KEE
Sbjct: 222 VEYVYKRTGKHAAIMKIDPPPPPPPEEAAAAAEGEKKEE 260
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +1
Query: 208 PVETSKYVERSTQADPPINTYPQNNYAP--PQNSYYPQNTYAPP 333
PV++S E S P T P N +P P +S P + APP
Sbjct: 5 PVDSSPAPETSNGTPPSNGTSPSNESSPPTPPSSPPPSSISAPP 48
>At4g28030.1 68417.m04021 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 274
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 620 PVSMVASLVGPVVDGVNFAISSSVRVPALFHQACL 516
PV+ + + P +D F IS SV L+ ACL
Sbjct: 41 PVAASSHICAPAIDKSTFVISESVSEDELWAAACL 75
>At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 300
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +1
Query: 190 EPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSYYPQNTY 324
+P P P + Q PP+ YP + PP YP Y
Sbjct: 27 QPPPPPPQSQPPPPQTQQQTYPPVMGYPGYHQPPPPYPNYPNAPY 71
>At3g20850.1 68416.m02636 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +1
Query: 187 FEPEPA-YPVETSKYVERSTQADPPINTYPQN-NYAPPQ--NSYYPQNTYAPPQNTY 345
+ P PA P + Y PP YP + PPQ +YY + + PP + Y
Sbjct: 62 YSPPPADLPPPPTPYYSPPADLPPPTPIYPPPVAFPPPQAYQAYYYRKSPPPPPSKY 118
>At3g05545.1 68416.m00609 transcription factor, putative / zinc
finger (C3HC4 type RING finger) family protein similar
to VIP2 protein [Avena fatua] gi|6996144|emb|CAB75506;
contains Pfam domain PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 425
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 516 EASLVKKGWYSYTGADGKVYTVHYWADKTGYHAYGDHLPTPPP 644
++S W + + G+V T + + YH + H P PPP
Sbjct: 195 DSSSFSSHWNTGSSVSGEVPTPYGFPVDPHYHGWDYHPPPPPP 237
>At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar to
SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
{Homo sapiens}, DEAD box RNA helicase DDX3 [Homo
sapiens] GI:3523150; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 633
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 190 EPEPAYPVETSKYVERSTQADPPINTYPQNNYAPPQNSY 306
EPEPA+ + + + D PI T +N PP N++
Sbjct: 124 EPEPAFTEQDNTVINFDAYEDIPIET-SGDNVPPPVNTF 161
>At2g39850.1 68415.m04894 subtilase family protein contains
similarity to subtilisin-like protease C1 GI:13325079
from [Glycine max]
Length = 774
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 250 DPPINTYPQNNYAPPQNSYYP-QNTYAPPQNT 342
D PI Y N Q+S+YP N APP++T
Sbjct: 346 DKPIIVYDTINTFETQDSFYPLLNEKAPPEST 377
>At1g67140.1 68414.m07638 expressed protein
Length = 2158
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 605 ASLVGPVVDGVNFAISSSVRVPALFHQACLFCMG 504
AS P DG NFA S + A+F ACL +G
Sbjct: 1627 ASSQKPYTDGTNFAADSGFHLRAIF-GACLHMVG 1659
>At1g07310.1 68414.m00778 C2 domain-containing protein contains
similarity to shock protein SRC2 [Glycine max]
gi|2055230|dbj|BAA19769 ; contains Pfam profile
PF00168:C2 domain
Length = 352
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 585 YWADKTGYHAYGDHLPTPPPVPAAIQAALDQNAKEEAAQ 701
Y++ G H Y P PPP A I A Q E +Q
Sbjct: 157 YYSAPQGNHYYSPSPPPPPPPQAPITAPSPQRDYREFSQ 195
>At1g01510.1 68414.m00067 C-terminal binding protein (ANGUSTIFOLIA)
nearly identical to C-terminal binding protein
ANGUSTIFOLIA [Arabidopsis thaliana] GI:15408535;
contains Pfam profile PF02826: D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain
Length = 636
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 DIKMKLILIVAAF-LAVTFADNVESDKEIEDSEAAE 118
+I+ K I I+ +F L N SD+E+E+SEA+E
Sbjct: 318 EIREKAISILHSFFLDGVIPSNTVSDEEVEESEASE 353
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,198,175
Number of Sequences: 28952
Number of extensions: 350584
Number of successful extensions: 1410
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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