Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20831
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.80 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.3  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.3  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   7.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.4  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   9.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 521 LNLLPCSEYFFSLFFCH*VHFVY 453
           L  LPC  YF+S F    +H ++
Sbjct: 206 LLFLPCIYYFYSAFIIFTIHLLF 228


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 411 PQDMTGSNAYLFPFHDFLHQKHISELQ 331
           P +    N+Y+ P  DF    HI + Q
Sbjct: 33  PSEEYNQNSYIPPGGDFFGNHHIQQQQ 59


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 411 PQDMTGSNAYLFPFHDFLHQKHISELQ 331
           P +    N+Y+ P  DF    HI + Q
Sbjct: 33  PSEEYNQNSYIPPGGDFFGNHHIQQQQ 59


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 155 SYSPII*QGIQDASEQQLTLN 217
           SY+ +I   I+++ E++LTLN
Sbjct: 87  SYNALIMMAIRNSPEKRLTLN 107


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 411 PQDMTGSNAYLFPFHDFLHQKHISELQ 331
           P +    N+Y+ P  DF    HI + Q
Sbjct: 33  PSEEYNQNSYIPPGGDFFGNHHIQQQQ 59


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 411 PQDMTGSNAYLFPFHDFLHQKHISELQ 331
           P +    N+Y+ P  DF    HI + Q
Sbjct: 33  PSEEYNQNSYIPPGGDFFGNHHIQQQQ 59


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -3

Query: 447 RISWLLESSVKSPQDMTGSNAYLFPFHDFLHQK 349
           ++  L +S     +++   + + FP HDFL ++
Sbjct: 110 KLQHLHQSKFNPHEEVKLQHLHQFPHHDFLERE 142


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 60  NLCFLFLLTLNVMLTCMR 7
           +L FLF  TL +M  C+R
Sbjct: 244 SLIFLFNCTLIIMCDCVR 261


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
          protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 64 FKSLFFIFANSQCYV 20
          FK LF +FA  Q YV
Sbjct: 2  FKVLFVVFACVQAYV 16


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,364
Number of Sequences: 336
Number of extensions: 4091
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)