Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20831
(707 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 140 2e-34
SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces p... 37 0.002
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 31 0.16
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 30 0.28
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 30 0.37
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 29 0.49
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 27 2.6
SPAC3C7.14c |obr1|apt1, uhp1|ubiquitinated histone-like protein ... 27 2.6
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 2.6
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo... 26 6.1
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 6.1
SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr... 25 8.0
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 25 8.0
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 25 8.0
SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces pom... 25 8.0
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 25 8.0
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 25 8.0
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 140 bits (339), Expect = 2e-34
Identities = 60/88 (68%), Positives = 76/88 (86%)
Frame = +3
Query: 255 LWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPE 434
LWDCGGQEAFMENY ++QRD+IFRNV+VLIYVFDVESRE E+D+ +++CLEA + NSP+
Sbjct: 55 LWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQ 114
Query: 435 ARIFCLVHKMDLVAEEQREEIFRARKKI 518
AR+FCL+HKMDLV E+ R+ +F RK I
Sbjct: 115 ARVFCLIHKMDLVQEDLRDLVFEERKAI 142
Score = 104 bits (249), Expect = 1e-23
Identities = 46/54 (85%), Positives = 54/54 (100%)
Frame = +1
Query: 94 MKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLN 255
M+KKVLLMG+SGSGK+SMRSI+F+NY+A+DTRRLGATID+EHSHVRFLGNLVLN
Sbjct: 1 MRKKVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLN 54
Score = 85.8 bits (203), Expect = 5e-18
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = +2
Query: 530 SKPLECTCFRTSIWDETLYKAWSSIVYKLIPNVKALESSLKQFAAIVDADEVLLFERAT 706
SK LE TC TSIWDETL+KAWS+IVY LIPN LES L++FA +A EV+LFER T
Sbjct: 147 SKDLETTCLATSIWDETLFKAWSAIVYTLIPNTPTLESHLREFAKAAEAAEVILFERTT 205
>SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 314
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 488 RRNIQSKEED-LKGLS-KPLECTCFRTSIWDETLYKAWSSIVYKLIPNVKALESSLKQFA 661
+R+IQ + +D L + + + + TSI+D ++++A+S ++ KLIP + LE+ L F
Sbjct: 132 QRDIQQRTQDELADIGLENVPISFHLTSIFDHSIFEAFSRVIQKLIPQLPTLENLLNIFC 191
Query: 662 AIVDADEVLLFE 697
+ ++ LF+
Sbjct: 192 SNSLVEKAYLFD 203
Score = 31.1 bits (67), Expect = 0.16
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 100 KKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHV 228
+K++LMG SGK+S++ ++F +T L +T + H+
Sbjct: 4 RKIILMGLRRSGKSSIQKVVFYKMPPNETLFLESTSKLTQDHI 46
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 31.1 bits (67), Expect = 0.16
Identities = 21/93 (22%), Positives = 43/93 (46%)
Frame = +2
Query: 425 LSRSQDILFSTQNGLSGRRTKRRNIQSKEEDLKGLSKPLECTCFRTSIWDETLYKAWSSI 604
L R+Q+ L + ++ S + + N+Q + LK ++ LE + ETL + +
Sbjct: 882 LRRTQERLANIEDSFSETKQQNENLQRESASLKQINNELESELLEKTSKVETLLSEQNEL 941
Query: 605 VYKLIPNVKALESSLKQFAAIVDADEVLLFERA 703
KL K L + + ++ + + +L E+A
Sbjct: 942 KEKLSLEEKDLLDTKGELESLRENNATVLSEKA 974
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 30.3 bits (65), Expect = 0.28
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDV-ESREMEKDMHYYQSCLEAILQNS 428
QLWD GQE F A +R + + V+DV S+ E + L ++
Sbjct: 60 QLWDTAGQERFQSLGVA-----FYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSN 114
Query: 429 PEARIFCLV-HKMDLVAEEQREEIFRAR 509
PE F L+ +K+D+ EEQ+ + +++
Sbjct: 115 PETFPFILLGNKVDV--EEQKRMVSKSK 140
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 348 VFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVHKMDLVAE 479
+++++S E+ +DM + L ++ P R+FCLV + L E
Sbjct: 1144 IYNLDSMEIFQDMSLKEGPLSKVVWTRPMIRLFCLVWRCLLAKE 1187
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 97 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHV 228
K+ VLL+G +G GKT++ I+ A + ++ + A D E+ +
Sbjct: 1186 KEPVLLVGDTGCGKTTVCQIL-AECLHKELHIINAHQDTENGDI 1228
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 29.5 bits (63), Expect = 0.49
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 384 MHYYQSCLEAILQNSPEARIFCLVHKMDLVAEEQREEI 497
+ Y+ SC E IL NS + R+F + K++ + + E I
Sbjct: 491 LKYWLSCYERILPNSADERVFLVRSKLESLLTRRAEII 528
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAI 416
Q+WD GQE F S N +R + V+DV +++ +++ + S + A+
Sbjct: 65 QIWDTAGQEK-----FRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAM 114
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 521 KGLSKPLECT-CFRTSIWDETLYKAWSSI 604
K LS P +C+ CF+ WD TL + +S+
Sbjct: 593 KKLSTPTQCSSCFQEYCWDGTLATSTASV 621
>SPAC3C7.14c |obr1|apt1, uhp1|ubiquitinated histone-like protein
Uhp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 202
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 245 WFSIMGLWWSGSFHGKLF 298
W S GLW G+ HGK F
Sbjct: 94 WDSTGGLWVQGALHGKYF 111
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 521 KGLSKPLECT-CFRTSIWDETLYKAWSSI 604
K LS P +C+ CF+ WD TL + +S+
Sbjct: 593 KKLSTPTQCSSCFQEYCWDGTLATSTASV 621
>SPCC126.09 |||vacuolar membrane zinc transporter
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 418
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 105 LFLHFGKKMF*VRGSNLCFLFLLTLNVMLTC 13
LFLH K+ + + C LFLLT ++ TC
Sbjct: 8 LFLHLSKEFY-----DCCGLFLLTFFLLTTC 33
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 97 KKKVLLMGKSGSGKTSMRSIIFANYIARD 183
++KV ++G SGSGK+++ ++ Y + D
Sbjct: 1128 REKVAIVGISGSGKSTLVELLRKTYPSED 1156
>SPAPJ691.02 |||yippee-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 345 YVFDVESREMEKDMHYYQSCLEAILQNSPEARIFCLVH 458
YV E + KD HY +A+LQ C +H
Sbjct: 83 YVSSYEPSQKFKDGHYILEMQDAVLQRDDPEPDDCFIH 120
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 67 PDLEHFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLG 240
PDL + + +LL G G+GKT + A +A ++R + +I +FLG
Sbjct: 482 PDLFQGLREPARGMLLFGPPGTGKT-----MLARAVATESRSVFFSISASSLTSKFLG 534
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 294 SFP*KLPDHHNPIIENQITEETDM*MFNVNCCSEASCIPCYIIGEY 157
SFP LP+ NP+I+N + ++ + + E S C + G +
Sbjct: 50 SFPSALPNSENPVIQNISSSSSEPHHTSQSTPGETSSPVCPVSGAH 95
>SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 422 ELSRSQDILFSTQNGLSGRRTKRRNIQSKEEDLKGLSKPLEC--TCFRT 562
+LS D LF + LS K+RN+ +E + + ++C TC T
Sbjct: 4 DLSDINDSLFKLSDKLSNDLAKQRNLCIVKEPSFSIEEHIKCFTTCINT 52
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 25.4 bits (53), Expect = 8.0
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDV-ESREMEKDMHYYQSCLEAILQNS 428
QLWD GQE F A +R + + V++V S+ + ++ Q L Q+
Sbjct: 60 QLWDTAGQERFQSLGMA-----FYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDE 114
Query: 429 PEARIFCLVHKMDLVAEEQREEIFRA 506
+ +++D A ++ + RA
Sbjct: 115 CAFPFIIVGNQIDKDASKRAVSLHRA 140
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 25.4 bits (53), Expect = 8.0
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +1
Query: 106 VLLMGKSGSGKTSMRSIIFANYIARDTRRL 195
V+++G SGSGK+++ + +F+ ++ RL
Sbjct: 35 VMVVGPSGSGKSTLINTLFSAHLMDSKGRL 64
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,041,379
Number of Sequences: 5004
Number of extensions: 67018
Number of successful extensions: 239
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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