Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20831
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 150 1e-36
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 44 1e-04
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 38 0.005
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 34 0.087
Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical pr... 34 0.11
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 32 0.46
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 32 0.46
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 32 0.46
Z73426-7|CAB60290.1| 338|Caenorhabditis elegans Hypothetical pr... 31 0.81
AL110480-3|CAB60328.1| 338|Caenorhabditis elegans Hypothetical ... 31 0.81
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 31 1.1
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 29 3.3
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 29 3.3
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 29 4.3
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 29 4.3
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 28 7.5
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas... 27 9.9
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 150 bits (363), Expect = 1e-36
Identities = 62/86 (72%), Positives = 77/86 (89%)
Frame = +3
Query: 255 LWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSPE 434
LWDCGGQE+FMEN+ SQ+D IF+NV+VLIYVFDVESRE EKD+ YYQSCLEA+LQNSP
Sbjct: 57 LWDCGGQESFMENFLVSQKDQIFKNVQVLIYVFDVESREFEKDLRYYQSCLEALLQNSPN 116
Query: 435 ARIFCLVHKMDLVAEEQREEIFRARK 512
A++FCL+HKMDL+ E++REE F+ R+
Sbjct: 117 AQVFCLIHKMDLIEEDKREETFKRRE 142
Score = 95.1 bits (226), Expect = 4e-20
Identities = 44/53 (83%), Positives = 50/53 (94%)
Frame = +1
Query: 97 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLN 255
K+KVLLMGKSGSGKTSMRSIIFANYIARD RLG TI+VEH+HV+FLGN+VL+
Sbjct: 4 KRKVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVLH 56
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +2
Query: 545 CTCFRTSIWDETLYKAWSSIVYKLIPNVKALESSLKQFAAIVDADEVLLFERAT 706
C CF++SIWDETLYKAWS+IVY L+PNV +E LK+F AI+DADEV+LFERAT
Sbjct: 165 CQCFKSSIWDETLYKAWSAIVYHLVPNVGTMEDKLKKFGAILDADEVILFERAT 218
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSP 431
++ D GG + +EN + F NV+ +++ FD +M D +YQ L+ +L++SP
Sbjct: 311 KMQDYGGTKEEIENQLRDETTT-FSNVDAMLFFFDASVDDMSADFDHYQKALKLLLKHSP 369
Query: 432 EARIFCLVHKMDLVAEEQREEI 497
EA+IF + K DL++ ++ + I
Sbjct: 370 EAKIFIFLTKTDLLSVDEDKVI 391
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 100 KKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLG 240
+K++L+G++G+GK+S+R F + R L T D+ HS +R+ G
Sbjct: 263 RKIILLGRTGAGKSSLRGAQF--HDRRQFDNLAPTGDITHSSLRYAG 307
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 216 TFTCPFPR*FGSQLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYY 395
T P R QLWD GQE F S FR + ++ +FDV S E+
Sbjct: 243 TMKIPPNRAIAMQLWDTAGQER-----FRSITKQYFRKADGVVLMFDVTS---EQSFLNV 294
Query: 396 QSCLEAILQNSPEARIFCLV-HKMDLVAEE-QREEIFRARKKI 518
++ ++++ +A + CLV +KMDL + R ++RA +K+
Sbjct: 295 RNWIDSVRAGVDDATVMCLVGNKMDLFGSDIARSAVYRAAEKL 337
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMH-YYQSCLEAILQNS 428
QLWD GQE + ++ A + +RNV +++V+DV RE D+ + + C + L
Sbjct: 152 QLWDTAGQERYRQSIVA----HYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGD 207
Query: 429 PEARIFCLVHKMDL 470
E + +K D+
Sbjct: 208 SEVPRILIGNKCDV 221
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 34.3 bits (75), Expect = 0.087
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 258 WDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDM 386
WD GQE + ++ A + +RNV +++V+DV RE D+
Sbjct: 1 WDTAGQERYRQSIVA----HYYRNVNAVVFVYDVTCRESFNDL 39
>Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical
protein F10G8.6 protein.
Length = 313
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +1
Query: 67 PDLEHFFSKMKKKVLLM-GKSGSGKTSMRSIIFANYIARDTRRLGATIDVE 216
P ++ FS++K K+L++ GK G GK+++ S + A +A D + A +DV+
Sbjct: 48 PKIQDRFSRIKHKILILSGKGGVGKSTLTSNL-ARALASDPSKQVAILDVD 97
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSP 431
Q+WD GQE F RN + + V+DV R +D+ + L+ +
Sbjct: 108 QVWDTAGQER-----FRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDR-SSGTE 161
Query: 432 EARIFCLVHKMDLVAEEQRE 491
+A ++ + +K DLV E+RE
Sbjct: 162 DANVYLIGNKTDLV--EKRE 179
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/86 (27%), Positives = 46/86 (53%)
Frame = +1
Query: 82 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNYG 261
F K +KV ++G++GSGK+S+ ++IF Y + TI ++ +R +G + L G
Sbjct: 1139 FEIKGGEKVGIIGRTGSGKSSLANLIFRLYPVTN-----GTIYIDGVDIRTVGLVKLRRG 1193
Query: 262 IVVVRKLSWKTILHHKETIYSGTLKF 339
I + + +++SGT++F
Sbjct: 1194 ISAIAQ---------DPSLFSGTVRF 1210
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/86 (27%), Positives = 46/86 (53%)
Frame = +1
Query: 82 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNYG 261
F K +KV ++G++GSGK+S+ ++IF Y + TI ++ +R +G + L G
Sbjct: 1112 FEIKGGEKVGIIGRTGSGKSSLANLIFRLYPVTN-----GTIYIDGVDIRTVGLVKLRRG 1166
Query: 262 IVVVRKLSWKTILHHKETIYSGTLKF 339
I + + +++SGT++F
Sbjct: 1167 ISAIAQ---------DPSLFSGTVRF 1183
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/86 (27%), Positives = 46/86 (53%)
Frame = +1
Query: 82 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNYG 261
F K +KV ++G++GSGK+S+ ++IF Y + TI ++ +R +G + L G
Sbjct: 1139 FEIKGGEKVGIIGRTGSGKSSLANLIFRLYPVTN-----GTIYIDGVDIRTVGLVKLRRG 1193
Query: 262 IVVVRKLSWKTILHHKETIYSGTLKF 339
I + + +++SGT++F
Sbjct: 1194 ISAIAQ---------DPSLFSGTVRF 1210
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/86 (27%), Positives = 46/86 (53%)
Frame = +1
Query: 82 FFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNYG 261
F K +KV ++G++GSGK+S+ ++IF Y + TI ++ +R +G + L G
Sbjct: 1112 FEIKGGEKVGIIGRTGSGKSSLANLIFRLYPVTN-----GTIYIDGVDIRTVGLVKLRRG 1166
Query: 262 IVVVRKLSWKTILHHKETIYSGTLKF 339
I + + +++SGT++F
Sbjct: 1167 ISAIAQ---------DPSLFSGTVRF 1183
>Z73426-7|CAB60290.1| 338|Caenorhabditis elegans Hypothetical
protein Y24F12A.2 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 70 DLEHFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGAT 204
D E + + V+LMG SGKTS+R ++F +T + +T
Sbjct: 17 DEEDDYPDSRPTVILMGHKRSGKTSIRKVVFQKMSPNETMFVEST 61
>AL110480-3|CAB60328.1| 338|Caenorhabditis elegans Hypothetical
protein Y24F12A.2 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 70 DLEHFFSKMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGAT 204
D E + + V+LMG SGKTS+R ++F +T + +T
Sbjct: 17 DEEDDYPDSRPTVILMGHKRSGKTSIRKVVFQKMSPNETMFVEST 61
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSP 431
Q+WD GQE+ F S + +R + V+D+ R+ ++ S LE Q+S
Sbjct: 58 QIWDTAGQES-----FRSITRSYYRGAAGALLVYDITRRD---TFNHLTSWLEDARQHSN 109
Query: 432 EARIFCLV-HKMDLVA--EEQREE 494
+ L+ +K DL A E +REE
Sbjct: 110 SNMVIMLIGNKSDLEARREVKREE 133
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/87 (28%), Positives = 38/87 (43%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSP 431
Q+WD GQE F A R + +R + V+D+ R H +A +P
Sbjct: 63 QIWDTAGQERFR----AVTR-SYYRGAAGALMVYDITRRSTYN--HLSSWLADAKSLTNP 115
Query: 432 EARIFCLVHKMDLVAEEQREEIFRARK 512
IF + +K DL E+QR+ + K
Sbjct: 116 NTAIFLIGNKADL--EDQRDVPYEEAK 140
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 243 FGSQLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE 371
F LWD GGQ++ + +Y+ N F + + LI+V D RE
Sbjct: 60 FQLNLWDVGGQKS-LRSYW----KNYFESTDALIWVVDSSDRE 97
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 142 WFYQNHFFPLIVPFSSFWKKNVLGQGFKSLFFIFA 38
WF F L++ F W+ VLG G L IF+
Sbjct: 837 WFIAGTIFSLLLAFPFVWELGVLGLGITILLTIFS 871
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/88 (29%), Positives = 38/88 (43%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSP 431
QLWD GQE F S FR+ I +FD+ + + ++ + S L+
Sbjct: 68 QLWDTAGQER-----FRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQ 122
Query: 432 EARIFCLVHKMDLVAEEQREEIFRARKK 515
I C +K DL E R ++ AR K
Sbjct: 123 PDIIIC-GNKADL---ENRRQVSTARAK 146
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/88 (29%), Positives = 38/88 (43%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESREMEKDMHYYQSCLEAILQNSP 431
QLWD GQE F S FR+ I +FD+ + + ++ + S L+
Sbjct: 68 QLWDTAGQER-----FRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQ 122
Query: 432 EARIFCLVHKMDLVAEEQREEIFRARKK 515
I C +K DL E R ++ AR K
Sbjct: 123 PDIIIC-GNKADL---ENRRQVSTARAK 146
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESR 368
Q+WD GQE F S + +R+ + L+ V+D+ +R
Sbjct: 55 QIWDTAGQER-----FRSVTTSYYRDADALLLVYDIANR 88
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESR 368
Q+WD GQE F S + +R+ + L+ V+D+ +R
Sbjct: 55 QIWDTAGQER-----FRSVTTSYYRDADALLLVYDIANR 88
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 252 QLWDCGGQEAFMENYFASQRDNIFRNVEVLIYVFDVESRE-MEKDMHYYQSCLEAILQNS 428
QLWD GQE F S + +RN ++ ++D +RE E ++ + + S
Sbjct: 70 QLWDTAGQEK-----FRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPS 124
Query: 429 PEARIFCLV-HKMDLVAEEQ 485
P +F LV K D+ ++ Q
Sbjct: 125 PSKCVFQLVGTKSDMDSQRQ 144
>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
protein 12 protein.
Length = 1280
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 187 RRLGATIDVEHSHVR-FLGNLVLNYGIVVVRKLSWKTILHHKETIYSGTLKF*YMFL 354
+ L A + H +V FLG +V Y + VVR+ K LH + + + LK +M++
Sbjct: 713 KELRAMRQLAHPNVNNFLGIIVCQYSVTVVREYCSKGSLH--DILRNENLKLDHMYV 767
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,622,076
Number of Sequences: 27780
Number of extensions: 365424
Number of successful extensions: 1026
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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