Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20830
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 591 RKPSSDRADVTIICNHSV 644
           ++PSSD ADV +   H+V
Sbjct: 84  KQPSSDMADVLLSLKHAV 101


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 507 KFQNILLMRFY*LILNLFKKNVFSLQNARKPSSDRADVTIICN 635
           K +N+L  +    IL   K N+F L+ +    +D     I+CN
Sbjct: 81  KAKNLLYSKQIVTILKKTKSNIFILKESVDTFNDIFGWIILCN 123


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 151 ESYSKAFEKR*WIIEIYCNRSRF 219
           E  S+ F+ R W++ I    SRF
Sbjct: 320 EELSEIFKPRGWVLTIAVPASRF 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,151
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)