Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20830
(685 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 26 1.3
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 25 1.7
DQ370042-1|ABD18603.1| 194|Anopheles gambiae putative TIL domai... 24 3.9
AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical prote... 24 5.1
AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosens... 24 5.1
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 23 6.8
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 9.0
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 23 9.0
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 23 9.0
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 23 9.0
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 23 9.0
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 23 9.0
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 25.8 bits (54), Expect = 1.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 263 FAPLRGRLSFCSWLQNLDRLQYISMIHYLFSNAFE*LSCFGPLNS 129
F+P FC WL N I ++ +FS+A L+ PLN+
Sbjct: 839 FSPTNRFRIFCHWLCNHSTFGNIILVCIMFSSAM--LAAEDPLNA 881
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 25.4 bits (53), Expect = 1.7
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 142 PKQESYSKAFEKR*WIIEIYCNRSRFCSQEQNDKRPRRGANPLSRNKTPT 291
P S KA EK ++++C + + ++ R+G NP NK+ T
Sbjct: 1987 PTCASQCKATEKAPKYVDVHCRDATDSVAQLYKQQIRKGVNPDMSNKSVT 2036
>DQ370042-1|ABD18603.1| 194|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 194
Score = 24.2 bits (50), Expect = 3.9
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -1
Query: 349 DRRERFLRCSPA--LTSVPRLESVFYSATKG 263
D ERFL C P L R E Y+ T+G
Sbjct: 141 DANERFLECGPVYQLACDSRYERDTYNCTEG 171
>AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical protein
protein.
Length = 191
Score = 23.8 bits (49), Expect = 5.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 668 DLQSLISLNRMITNNSDVRTIRRRLPSILEGKHI 567
D+ ++++ NR++TN D R+ P EGK +
Sbjct: 36 DIDTILASNRLVTNYVDCLLSRKPCPP--EGKDL 67
>AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosensory
protein CSP5 protein.
Length = 191
Score = 23.8 bits (49), Expect = 5.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 668 DLQSLISLNRMITNNSDVRTIRRRLPSILEGKHI 567
D+ ++++ NR++TN D R+ P EGK +
Sbjct: 36 DIDTILASNRLVTNYVDCLLSRKPCPP--EGKDL 67
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 23.4 bits (48), Expect = 6.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 71 HERDVEAAAAITLFHVATXHYLEVQNKKVIRKRLKKDSGSLKYIVTDQG 217
++ +V+ A H LE+ NK R+K S +L V D G
Sbjct: 610 YDPEVDQAMQFAFGHSFIVKNLEIANKITFHPRIKTRSVTLDGDVVDPG 658
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.0 bits (47), Expect = 9.0
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 160 SKAFEKR*WIIEIYCNRSRFCSQEQNDKRPRRGANP-LSRNKTPT 291
SK+++ WI EI+ + +Q + D+ R+ NP L +K PT
Sbjct: 3027 SKSYKVTNWINEIFEHFFNTENQGKQDQEDRK-VNPYLKHHKRPT 3070
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 9.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 121 CHMKQCYCSSSFYVPF 74
C+ +C C SF+ PF
Sbjct: 42 CNCGRCSCDESFFGPF 57
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 9.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 121 CHMKQCYCSSSFYVPF 74
C+ +C C SF+ PF
Sbjct: 42 CNCGRCSCDESFFGPF 57
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 9.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 121 CHMKQCYCSSSFYVPF 74
C+ +C C SF+ PF
Sbjct: 42 CNCGRCSCDESFFGPF 57
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.0 bits (47), Expect = 9.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 121 CHMKQCYCSSSFYVPF 74
C+ +C C SF+ PF
Sbjct: 42 CNCGRCSCDESFFGPF 57
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 23.0 bits (47), Expect = 9.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 121 CHMKQCYCSSSFYVPF 74
C+ +C C SF+ PF
Sbjct: 618 CNCGRCSCDESFFGPF 633
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,713
Number of Sequences: 2352
Number of extensions: 13552
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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