Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20829
         (780 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VY31 Cluster: CG9411-PA; n=2; Sophophora|Rep: CG9411-...    47   6e-04
UniRef50_Q170E2 Cluster: Putative uncharacterized protein; n=1; ...    44   0.004
UniRef50_Q7Q4K3 Cluster: ENSANGP00000019937; n=1; Anopheles gamb...    39   0.12 
UniRef50_UPI0000E485D4 Cluster: PREDICTED: hypothetical protein;...    36   1.1  
UniRef50_A7RL36 Cluster: Predicted protein; n=1; Nematostella ve...    36   1.1  
UniRef50_A1UUW0 Cluster: Peptide chain release factor 1; n=3; Bu...    34   3.5  
UniRef50_Q2PIR2 Cluster: Predicted flavoprotein involved in K+ t...    33   8.0  

>UniRef50_Q9VY31 Cluster: CG9411-PA; n=2; Sophophora|Rep: CG9411-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 993

 Score = 46.8 bits (106), Expect = 6e-04
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = +2

Query: 413 PDPAFRSVRRATGQSIWCSTETATIQFAHPVRSYSGGGHSI-HTGLNTPKKPIKFRDSVP 589
           P P F ++  ++  +   S     IQ+  P    SG        G   P KP+ +R  VP
Sbjct: 499 PPPQFAALTSSSSHAHSQSQSNVNIQYGAP----SGNPQPFPQHGAGQPNKPVAYRPPVP 554

Query: 590 AGLLEHVGQTTHGKDTLTIDNLTQGPAYLPP 682
           AGLLE +G T    D   +    Q   Y+PP
Sbjct: 555 AGLLESIGATVQHLDQFGVKPQQQPQTYIPP 585


>UniRef50_Q170E2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 690

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +2

Query: 554 PKKPIKFRDSVPAGLLEHVGQTTHGKDTLTIDNLTQGPAYLPPPIRD 694
           P++PI +R  VP+GL+E +G T    D         G  YLPPP  D
Sbjct: 407 PRQPIAYRPPVPSGLIESIGHTVEQLDNFGSKPHYSGDVYLPPPTSD 453


>UniRef50_Q7Q4K3 Cluster: ENSANGP00000019937; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000019937 - Anopheles gambiae
           str. PEST
          Length = 1407

 Score = 39.1 bits (87), Expect = 0.12
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +2

Query: 503 VRSYSGGGHSIHTGLNTPKKP 565
           +RSYSGGGH   TG NTP+KP
Sbjct: 140 IRSYSGGGHDSSTGSNTPRKP 160


>UniRef50_UPI0000E485D4 Cluster: PREDICTED: hypothetical protein; n=1;
            Strongylocentrotus purpuratus|Rep: PREDICTED:
            hypothetical protein - Strongylocentrotus purpuratus
          Length = 1005

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +3

Query: 234  PVEDSVRAHYTENHDPQADLAFIQSSIPSQRPFDSYGAPPLDSLSGGPYPPSVRQQG 404
            P  +SV A  T+NH PQ    F    +PS +P      PP  + +    PP ++QQG
Sbjct: 949  PSFNSVVAGITQNHIPQQQSGFAPG-LPSPQPTSGIPTPPYTAPNIKNIPPIIKQQG 1004


>UniRef50_A7RL36 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 2279

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +1

Query: 610  GSDHTRQGHPDD---RQSYPGTGVPTAAHQRRQRGQSSHIIRHKSIYRTNGFVQ 762
            G DH R+GH      R S P T   ++     Q+G S+    H+  Y+TNG VQ
Sbjct: 2110 GDDHPRKGHACGVMGRPSMPSTTKRSSYATATQKGNSTGRENHRESYQTNGMVQ 2163


>UniRef50_A1UUW0 Cluster: Peptide chain release factor 1; n=3;
           Burkholderia|Rep: Peptide chain release factor 1 -
           Burkholderia mallei (strain SAVP1)
          Length = 167

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +1

Query: 586 SCRLTGA--RGSDHTRQGHPDDRQSYPGTGVPTAAHQRRQRG 705
           +CRL  A  R S   R+G P  R+S+PG G  T AH+ R+ G
Sbjct: 96  ACRLPPAAYRLSPAVRRGTPAARRSHPGAGRRTIAHRARRAG 137


>UniRef50_Q2PIR2 Cluster: Predicted flavoprotein involved in K+
           transport; n=1; Aspergillus oryzae|Rep: Predicted
           flavoprotein involved in K+ transport - Aspergillus
           oryzae
          Length = 572

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 644 IDNLTQGPAYLPPPIRDAKEVNHHTSFGINLSIEPTDL 757
           +DN  +G  ++ PP+ +A EV  HT  G N    P +L
Sbjct: 226 LDNYVRGQTWIAPPVAEA-EVRKHTPTGSNFQYSPEEL 262


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,774,137
Number of Sequences: 1657284
Number of extensions: 18485856
Number of successful extensions: 58650
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 55060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58612
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)