Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20829
         (780 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AL591545-1|CAI40663.1|  724|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AL162578-2|CAI40012.1|  331|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AL162578-1|CAI40011.1|  724|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AL049820-3|CAI42306.1|  331|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AL049820-1|CAI42304.1|  724|Homo sapiens RP11-419L10.1 protein.        31   3.5  
AK074180-1|BAB85006.1|  349|Homo sapiens FLJ00253 protein protein.     31   3.5  
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod...    31   3.5  
AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein EL...    31   3.5  
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.      31   3.5  
BC126396-1|AAI26397.1|  574|Homo sapiens forkhead box J2 protein.      30   8.1  
AF155133-1|AAK49016.1|  526|Homo sapiens FOXJ2 forkhead factor i...    30   8.1  
AF155132-1|AAF65927.1|  574|Homo sapiens FOXJ2 forkhead factor p...    30   8.1  

>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
          Length = 1736

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 204 SNPAQSPFSPHASPHLSSIPGGPSPSPV 231


>AL591545-1|CAI40663.1|  724|Homo sapiens RP11-419L10.1 protein.
          Length = 724

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 122 SNPAQSPFSPHASPHLSSIPGGPSPSPV 149


>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
          Length = 1736

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 204 SNPAQSPFSPHASPHLSSIPGGPSPSPV 231


>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
          Length = 1736

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 204 SNPAQSPFSPHASPHLSSIPGGPSPSPV 231


>AL162578-2|CAI40012.1|  331|Homo sapiens RP11-419L10.1 protein.
          Length = 331

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 69  SNPAQSPFSPHASPHLSSIPGGPSPSPV 96


>AL162578-1|CAI40011.1|  724|Homo sapiens RP11-419L10.1 protein.
          Length = 724

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 122 SNPAQSPFSPHASPHLSSIPGGPSPSPV 149


>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
          Length = 1736

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 204 SNPAQSPFSPHASPHLSSIPGGPSPSPV 231


>AL049820-3|CAI42306.1|  331|Homo sapiens RP11-419L10.1 protein.
          Length = 331

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 69  SNPAQSPFSPHASPHLSSIPGGPSPSPV 96


>AL049820-1|CAI42304.1|  724|Homo sapiens RP11-419L10.1 protein.
          Length = 724

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 122 SNPAQSPFSPHASPHLSSIPGGPSPSPV 149


>AK074180-1|BAB85006.1|  349|Homo sapiens FLJ00253 protein protein.
          Length = 349

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 83  SNPAQSPFSPHASPHLSSIPGGPSPSPV 110


>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin
           remodeling complex subunit OSA2 protein.
          Length = 2165

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 629 SNPAQSPFSPHASPHLSSIPGGPSPSPV 656


>AF468300-1|AAL76077.1| 1740|Homo sapiens BRG1-binding protein
           ELD/OSA1 protein.
          Length = 1740

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 204 SNPAQSPFSPHASPHLSSIPGGPSPSPV 231


>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
          Length = 1957

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 309 SIPSQRPFDSYGAPPLDSLSGGPYPPSV 392
           S P+Q PF  + +P L S+ GGP P  V
Sbjct: 421 SNPAQSPFSPHASPHLSSIPGGPSPSPV 448


>BC126396-1|AAI26397.1|  574|Homo sapiens forkhead box J2 protein.
          Length = 574

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 303 QSSIPSQRPFDSYGAPPLDSLS-GGPYPPSVRQQGAKG 413
           Q   P+Q P    GAPPL + S  G  PP  +Q GA+G
Sbjct: 319 QQQAPAQGPSAVGGAPPLHTPSTDGCTPPGGKQAGAEG 356


>AF155133-1|AAK49016.1|  526|Homo sapiens FOXJ2 forkhead factor
           isoform FOXJ2.S protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 303 QSSIPSQRPFDSYGAPPLDSLS-GGPYPPSVRQQGAKG 413
           Q   P+Q P    GAPPL + S  G  PP  +Q GA+G
Sbjct: 319 QQQAPAQGPSAVGGAPPLHTPSTDGCTPPGGKQAGAEG 356


>AF155132-1|AAF65927.1|  574|Homo sapiens FOXJ2 forkhead factor
           protein.
          Length = 574

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 303 QSSIPSQRPFDSYGAPPLDSLS-GGPYPPSVRQQGAKG 413
           Q   P+Q P    GAPPL + S  G  PP  +Q GA+G
Sbjct: 319 QQQAPAQGPSAVGGAPPLHTPSTDGCTPPGGKQAGAEG 356


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,257,460
Number of Sequences: 237096
Number of extensions: 2939604
Number of successful extensions: 7858
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7858
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)