Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20828
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 170 3e-41
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 157 3e-37
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 144 2e-33
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 109 4e-23
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 105 1e-21
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 94 3e-18
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 93 5e-18
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 91 3e-17
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 91 3e-17
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 90 4e-17
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 87 3e-16
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 83 7e-15
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 79 9e-14
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 74 3e-12
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 71 2e-11
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 41 0.023
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 40 0.069
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.28
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 37 0.37
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.37
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.49
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 36 0.64
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.64
UniRef50_UPI00006A1336 Cluster: Syntaxin-4 (Renal carcinoma anti... 36 0.85
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 0.85
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 1.1
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 34 2.6
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 34 2.6
UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor; ... 33 4.5
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q72ST4 Cluster: Cytoplasmic membrane protein; n=4; Lept... 33 7.9
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 170 bits (413), Expect = 3e-41
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +3
Query: 252 FRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSG 431
FR QCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSG
Sbjct: 61 FRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSG 120
Query: 432 PREDSTRIGRAGTVRRQAVDVSPLRR 509
PREDSTRIGRAGTVRRQAVDVSPLRR
Sbjct: 121 PREDSTRIGRAGTVRRQAVDVSPLRR 146
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +2
Query: 500 LAPVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
L VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYA K++
Sbjct: 144 LRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 92.7 bits (220), Expect = 7e-18
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = +1
Query: 97 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 255
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRF
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRF 61
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 157 bits (380), Expect = 3e-37
Identities = 71/86 (82%), Positives = 79/86 (91%)
Frame = +3
Query: 252 FRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSG 431
FR QCPIVERLTNSLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSG
Sbjct: 54 FRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSG 113
Query: 432 PREDSTRIGRAGTVRRQAVDVSPLRR 509
PRED+TRIG AG VRRQAVD+SPLRR
Sbjct: 114 PREDATRIGSAGVVRRQAVDISPLRR 139
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/50 (82%), Positives = 46/50 (92%)
Frame = +2
Query: 500 LAPVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
L VNQAI+LL TGAREAAFRNIK+IAEC+ADELINAAKGSSNSYA K++
Sbjct: 137 LRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKK 186
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = +1
Query: 118 EIKLFGRWSCYDVQVSDMSLQDYIS-VKEKYAKYLPHSAGRYAHKRF 255
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRF
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRF 54
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 144 bits (349), Expect = 2e-33
Identities = 71/89 (79%), Positives = 77/89 (86%)
Frame = +3
Query: 243 TQAFRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAII 422
T+ FR +C IVERLTNSLMM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVA 116
Query: 423 NSGPREDSTRIGRAGTVRRQAVDVSPLRR 509
GPREDSTRIG AGTVRRQAVDVSPLRR
Sbjct: 117 ACGPREDSTRIGSAGTVRRQAVDVSPLRR 145
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/50 (68%), Positives = 44/50 (88%)
Frame = +2
Query: 500 LAPVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
L VNQA+ L+ GAREAAFRN+K+I+EC+A+E+INAAKGSSNSYA K++
Sbjct: 143 LRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKK 192
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 64 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 243
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 244 HKRF 255
KRF
Sbjct: 57 TKRF 60
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 109 bits (263), Expect = 4e-23
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +3
Query: 270 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 449
PI ER SLM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+
Sbjct: 71 PIAERFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTA 130
Query: 450 RIGRAGTVRRQAVDVSPLRR 509
RIGRAG++RR +VDVSPL+R
Sbjct: 131 RIGRAGSMRRTSVDVSPLKR 150
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2
Query: 500 LAPVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
L ++ AI L G R A+FRN T+AE +A+ELI A+ S NSYA ++
Sbjct: 148 LKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKK 197
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 105 bits (251), Expect = 1e-21
Identities = 48/95 (50%), Positives = 66/95 (69%)
Frame = +3
Query: 252 FRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSG 431
F+ T CPI+ERL SLM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N
Sbjct: 64 FKKTYCPILERLVCSLMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCA 123
Query: 432 PREDSTRIGRAGTVRRQAVDVSPLRRSTKQSGFCA 536
P EDS + +G +R+AVDVSP R+ ++ F A
Sbjct: 124 PHEDSLMLSNSGQKKREAVDVSPYRKISQAIYFIA 158
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/47 (42%), Positives = 36/47 (76%)
Frame = +2
Query: 509 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
++QAI+ + G ++AAF+N K+I+ + DE++NAA+ S+ SYA K++
Sbjct: 150 ISQAIYFIAVGTKKAAFKNPKSISIALHDEILNAARNSNTSYAIKKK 196
Score = 48.4 bits (110), Expect = 1e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +1
Query: 118 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 255
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPF 64
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +2
Query: 500 LAPVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
L VNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYA K++
Sbjct: 220 LRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 269
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = +3
Query: 363 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 509
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRR
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRR 222
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 93.1 bits (221), Expect = 5e-18
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = +3
Query: 252 FRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSG 431
F + PIVERL N +M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+
Sbjct: 80 FGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTA 139
Query: 432 PREDSTRIGRAGTVRRQAVDVSPLRR 509
PRE+ TRI G +VDVSP RR
Sbjct: 140 PREEITRIIMGGIAYSVSVDVSPQRR 165
Score = 41.9 bits (94), Expect = 0.013
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +2
Query: 518 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
A+ + GAR +F N K I EC+ADE+I AA SYA ++R
Sbjct: 169 ALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKR 212
Score = 41.5 bits (93), Expect = 0.017
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +1
Query: 121 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 255
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLK---PVILPHTEGRYQNTRF 80
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 90.6 bits (215), Expect = 3e-17
Identities = 44/51 (86%), Positives = 45/51 (88%)
Frame = +3
Query: 264 QCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 416
QCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 2 QCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 90.6 bits (215), Expect = 3e-17
Identities = 46/86 (53%), Positives = 57/86 (66%)
Frame = +3
Query: 252 FRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSG 431
F + PIVERL N +M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+
Sbjct: 54 FAKAEVPIVERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAA 113
Query: 432 PREDSTRIGRAGTVRRQAVDVSPLRR 509
PRE++T I G +AVD SP RR
Sbjct: 114 PREETTTIIYGGISYHEAVDSSPQRR 139
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +1
Query: 118 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 255
E+K+FG+W +V+V D L+DYI +K YLPH+ GR+A KRF
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLK---PMYLPHTGGRHAKKRF 54
Score = 40.7 bits (91), Expect = 0.030
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +2
Query: 518 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
A+ L+ GA++ AFRN K I EC+A+E+I AA+ + ++ +R+
Sbjct: 143 ALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRRK 186
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 90.2 bits (214), Expect = 4e-17
Identities = 45/95 (47%), Positives = 62/95 (65%)
Frame = +3
Query: 252 FRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSG 431
F+ ++ IVERL N LM G N GKK A++IV+ AF+I+H T ENP+QVLV+A+ N+
Sbjct: 67 FKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAA 126
Query: 432 PREDSTRIGRAGTVRRQAVDVSPLRRSTKQSGFCA 536
PRE++ R+ G QAVD +P RR + F A
Sbjct: 127 PREETVRLKYGGISVPQAVDTAPQRRVDQALKFLA 161
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +1
Query: 34 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 213
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 214 YLPHSAGRYAHKRF 255
+ H+ GR+A K+F
Sbjct: 55 -VAHTMGRHAQKQF 67
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/115 (40%), Positives = 67/115 (58%)
Frame = +3
Query: 246 QAFRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 425
Q F IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N
Sbjct: 59 QEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGN 118
Query: 426 SGPREDSTRIGRAGTVRRQAVDVSPLRRSTKQSGFCAQVHVRLHSEILKQSQSVL 590
+GPRE++ R+ G ++VD +PLRR GF A+ + + K + ++L
Sbjct: 119 TGPREETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAIL 173
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 82.6 bits (195), Expect = 7e-15
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +3
Query: 246 QAFRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 425
Q F ++ IVERL N+LM N GKK + +R V+ AF+I++ T +NP+QVLV AI N
Sbjct: 44 QQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIAN 103
Query: 426 SGPREDSTRIGRAGTVRRQAVDVSPLRR 509
+GPRE+ R+ G +AVD +P RR
Sbjct: 104 AGPREEVVRLKYGGISVPKAVDTAPQRR 131
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/44 (34%), Positives = 30/44 (68%)
Frame = +1
Query: 124 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 255
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLT---PVIVPHSSGKHARQQF 46
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 509 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
V+ A+ + G AAF++ +++AEC+A ELI AA + S++ R+
Sbjct: 132 VDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRK 178
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 79.0 bits (186), Expect = 9e-14
Identities = 41/86 (47%), Positives = 53/86 (61%)
Frame = +3
Query: 252 FRNTQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSG 431
F + +VERL N LM N GKK + I++ A I+ T ENP+QV+V A+ NSG
Sbjct: 50 FDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSG 109
Query: 432 PREDSTRIGRAGTVRRQAVDVSPLRR 509
PRE++TRI G Q+VDVSP RR
Sbjct: 110 PREETTRISYGGIAFLQSVDVSPSRR 135
Score = 41.5 bits (93), Expect = 0.017
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +1
Query: 118 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 255
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLN---PVLIPHTAGRNSKKMF 50
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 539 GAREAAFRNIKTIAECVADELINAAKGS-SNSYASKRR 649
GA + A ++ K+IA+C+ADEL+ A+K S+A K++
Sbjct: 146 GASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKK 183
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 74.1 bits (174), Expect = 3e-12
Identities = 37/78 (47%), Positives = 52/78 (66%)
Frame = +3
Query: 276 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 455
+ERL N+LM + GKK A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+
Sbjct: 47 IERLLNNLMRTEKWTGKKYSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRL 106
Query: 456 GRAGTVRRQAVDVSPLRR 509
G ++VDVSP RR
Sbjct: 107 KYGGIAVPKSVDVSPSRR 124
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/47 (29%), Positives = 33/47 (70%)
Frame = +2
Query: 509 VNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYASKRR 649
+++A+ + GA +A+F++ I +C+A+E++ AA+ +NS+A ++
Sbjct: 125 LDEALRNIARGATKASFKHKIHIQDCLANEILLAARNDANSFAISKK 171
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = +3
Query: 306 HGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQA 485
H N KK+ A +VK AF+II TG+NP+QVLV AI N+ PRED+T + G A
Sbjct: 93 HRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVA 152
Query: 486 VDVSPLRR 509
VD+SPLRR
Sbjct: 153 VDISPLRR 160
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +1
Query: 118 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 255
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLE---PRLLPHTHGRHAKKHF 59
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +1
Query: 28 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 192
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 41.1 bits (92), Expect = 0.023
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 285 LTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP--REDSTRIG 458
L + L+ +GKK +A IV AFEII + T E+PL V AI N+ P + RIG
Sbjct: 22 LVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRNASPVVEVKARRIG 81
Query: 459 RAGTVRRQAVDVSPLR 506
G+ + V+VS R
Sbjct: 82 --GSTYQVPVEVSGFR 95
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 39.5 bits (88), Expect = 0.069
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +3
Query: 270 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 449
P V+ LTN +M H GKK A ++V A I+ L ++P++VL + GP +T
Sbjct: 117 PTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRETLDKLGPLV-NT 171
Query: 450 RIGRAGTVRRQAVDVSPLRRSTK 518
+ G +++ V + PL +
Sbjct: 172 KTMSTGVAKKRVVPI-PLNEKQR 193
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.28
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +3
Query: 276 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 434
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 37.1 bits (82), Expect = 0.37
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 273 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTR 452
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P + R
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMPVLE-VR 76
Query: 453 IGRAGTVRRQA-VDVSPLRRST 515
R G Q V V P RR+T
Sbjct: 77 ARRVGGSNYQVPVKVRPERRTT 98
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 282 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 419
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 36.7 bits (81), Expect = 0.49
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 270 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 446
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 447 TRIGRAGTVRR 479
RAG++++
Sbjct: 76 KPRRRAGSIQQ 86
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 36.3 bits (80), Expect = 0.64
Identities = 22/80 (27%), Positives = 42/80 (52%)
Frame = +3
Query: 270 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 449
P ++ TN +M +GKK A +I+ A I++L T ++PL +L + P +T
Sbjct: 129 PTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEETLDKMAPLM-AT 183
Query: 450 RIGRAGTVRRQAVDVSPLRR 509
++ + G + + V PL++
Sbjct: 184 KVQKTGAAKNRTVPY-PLKK 202
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.64
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +3
Query: 270 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 434
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_UPI00006A1336 Cluster: Syntaxin-4 (Renal carcinoma antigen
NY-REN-31).; n=1; Xenopus tropicalis|Rep: Syntaxin-4
(Renal carcinoma antigen NY-REN-31). - Xenopus
tropicalis
Length = 194
Score = 35.9 bits (79), Expect = 0.85
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 318 NGKKLMAVRIVKHAFEIIHLLTGE---NPLQVLVTAIINSGPREDSTRIGRAGTVRRQAV 488
N + L R ++ A +++ E + ++VL T I ++D I ++R A
Sbjct: 38 NEQFLQTTRQIRDALQLLREKVKELDTSQMKVLTTPIPEENMKKDLQAIRE--DIKRMAK 95
Query: 489 DV-SPLRRSTKQSGFCAQVHVRLHSEILKQSQSVL 590
D+ S L+ + GFCA + + HS I++ + VL
Sbjct: 96 DIRSKLQSESVTEGFCAHIKAQYHSCIIRDNHGVL 130
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 0.85
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +1
Query: 16 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 195
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 196 KEKYAKYLPH 225
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 270 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 434
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +1
Query: 7 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 177
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 178 QDYISVKEKYAKYLPHSAG 234
+ Y S + K+ + P G
Sbjct: 259 KQYPSSEFKFKTFTPPKTG 277
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -2
Query: 367 ISNACLTIRTAISFLPLFRPCIIREFVRRSTIGHWVL 257
+S A LT+ A FLP+F P I F+ ST+G WVL
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVL 37
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 34.3 bits (75), Expect = 2.6
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 282 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPRED-STRIG 458
RL N ++ +GKK +A +I+ A + I T NPL VL AI P TR
Sbjct: 21 RLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAIRRVTPNIGVKTRRN 80
Query: 459 RAGTVRRQAVDV 494
+ G+ R+ +++
Sbjct: 81 KKGSTRKVPIEI 92
>UniRef50_Q1JY60 Cluster: Multicopper oxidase, type 3 precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Multicopper
oxidase, type 3 precursor - Desulfuromonas acetoxidans
DSM 684
Length = 782
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 415 PLSTLDPVKIRLGSVVRVQFVVKPLMFHP 501
PLS D ++IR G VVR V + +M+HP
Sbjct: 507 PLSAGDDIRIRQGEVVRFMMVNRTMMYHP 535
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 279 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 452
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 453 IG 458
IG
Sbjct: 535 IG 536
>UniRef50_Q72ST4 Cluster: Cytoplasmic membrane protein; n=4;
Leptospira|Rep: Cytoplasmic membrane protein -
Leptospira interrogans serogroup Icterohaemorrhagiae
serovarcopenhageni
Length = 381
Score = 32.7 bits (71), Expect = 7.9
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +3
Query: 279 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEI--IHLLTGENPLQVLVTAIINSGPREDSTR 452
E+ SLM ++ +L+A I H EI + L +PL+ ++ + S
Sbjct: 268 EKAVRSLMGFLKDQSSRLLAALIQTHLKEIGEVKTLQEYSPLRAVLEFVEKRIDENVSGY 327
Query: 453 IGRAGTVRRQAVDVSPLRRSTKQSGFCAQVHVRLHSEIL 569
IGR TVR Q+++ LR++ + +R++ IL
Sbjct: 328 IGRQITVRLQSLEPKDLRKNLEWKTRNVLETIRINGSIL 366
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,742,732
Number of Sequences: 1657284
Number of extensions: 13237117
Number of successful extensions: 35477
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35308
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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