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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20823
         (671 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...   108   8e-25
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...   108   8e-25
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    88   1e-18
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    61   1e-10
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    54   2e-08
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    52   6e-08
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    49   7e-07
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    35   0.009
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...    34   0.021
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...    34   0.021
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...    34   0.021
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb...    29   0.61 
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi...    28   1.4  
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    28   1.4  
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl...    27   2.5  
SPCC4B3.18 |||phosphopantothenate-cysteine ligase|Schizosaccharo...    27   3.3  
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...    26   4.3  
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar...    25   7.5  
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha...    25   7.5  
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c...    25   7.5  
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    25   9.9  
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...    25   9.9  
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    25   9.9  

>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score =  108 bits (259), Expect = 8e-25
 Identities = 56/85 (65%), Positives = 65/85 (76%)
 Frame = +1

Query: 256 TIKSTAISMFFELEEKDLVFITNPDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 435
           TIKSTAIS+F E+ + D+  +  P         FL+NLIDSPGHVDFSSEVTAALRVTDG
Sbjct: 69  TIKSTAISLFAEMTDDDMKDMKEP----ADGTDFLVNLIDSPGHVDFSSEVTAALRVTDG 124

Query: 436 ALVVVERTSGVCVQTETVLRQAIAD 510
           ALVVV+   GVCVQTETVLRQA+ +
Sbjct: 125 ALVVVDTIEGVCVQTETVLRQALGE 149



 Score =  102 bits (244), Expect = 5e-23
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +2

Query: 53  MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 232
           MV FT +E+R +M K  N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1   MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60

Query: 233 KDEQDR 250
            DEQ+R
Sbjct: 61  ADEQER 66



 Score = 46.8 bits (106), Expect = 3e-06
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = +3

Query: 510 RIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYND 644
           RI+P++ +NK+DR            YQ F R+VE+VNV+I+TY D
Sbjct: 150 RIRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTYYD 194


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score =  108 bits (259), Expect = 8e-25
 Identities = 56/85 (65%), Positives = 65/85 (76%)
 Frame = +1

Query: 256 TIKSTAISMFFELEEKDLVFITNPDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 435
           TIKSTAIS+F E+ + D+  +  P         FL+NLIDSPGHVDFSSEVTAALRVTDG
Sbjct: 69  TIKSTAISLFAEMTDDDMKDMKEP----ADGTDFLVNLIDSPGHVDFSSEVTAALRVTDG 124

Query: 436 ALVVVERTSGVCVQTETVLRQAIAD 510
           ALVVV+   GVCVQTETVLRQA+ +
Sbjct: 125 ALVVVDTIEGVCVQTETVLRQALGE 149



 Score =  102 bits (244), Expect = 5e-23
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +2

Query: 53  MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 232
           MV FT +E+R +M K  N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1   MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60

Query: 233 KDEQDR 250
            DEQ+R
Sbjct: 61  ADEQER 66



 Score = 46.8 bits (106), Expect = 3e-06
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = +3

Query: 510 RIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYND 644
           RI+P++ +NK+DR            YQ F R+VE+VNV+I+TY D
Sbjct: 150 RIRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVISTYYD 194


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 87.8 bits (208), Expect = 1e-18
 Identities = 48/85 (56%), Positives = 63/85 (74%)
 Frame = +1

Query: 256 TIKSTAISMFFELEEKDLVFITNPDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 435
           T+KS+AIS+FF++       I+  D+ ++ EK +LINLIDSPGHVDFSSEV++A R+ DG
Sbjct: 69  TMKSSAISLFFKV-------ISQNDE-KRVEKDYLINLIDSPGHVDFSSEVSSASRLCDG 120

Query: 436 ALVVVERTSGVCVQTETVLRQAIAD 510
           A V+V+   GVC QT TVLRQA  D
Sbjct: 121 AFVLVDAVEGVCSQTITVLRQAWID 145



 Score = 63.3 bits (147), Expect = 3e-11
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = +2

Query: 71  DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 250
           +++  +   + NIRN +++AHVDHGK+TL DSL++  GII+   AG  RF D R+DE  R
Sbjct: 7   EKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITR 66



 Score = 33.5 bits (73), Expect = 0.028
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 510 RIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY 638
           RIK IL +NKMDR            +    R+VE VN +I T+
Sbjct: 146 RIKVILVINKMDRLITELKLSPIEAHYHLLRLVEQVNAVIGTF 188


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 61.3 bits (142), Expect = 1e-10
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = +1

Query: 322 NPDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQ 498
           N  Q    EK + IN+ID+PGH+DF+ EV  ALRV DGA++V+   SGV  QT TV RQ
Sbjct: 134 NEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQ 192



 Score = 35.1 bits (77), Expect = 0.009
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +2

Query: 59  NFTVDEIRGMMDKKR--NIRNMSVIAHVDHGKSTLTDSLVSKAGII 190
           N  + E     DKKR   IRN+ + AH+D GK+T T+ ++   G I
Sbjct: 41  NLNIQEQLNDNDKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRI 86


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 53.6 bits (123), Expect = 2e-08
 Identities = 23/47 (48%), Positives = 35/47 (74%)
 Frame = +1

Query: 361 INLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQA 501
           INLID+PGH DF+ EV  ++ V DGA+ +++ ++GV  QT+ V +QA
Sbjct: 95  INLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVWKQA 141



 Score = 34.7 bits (76), Expect = 0.012
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +2

Query: 104 NIRNMSVIAHVDHGKSTLTDSLVSKAG 184
           +IRN+ +IAH+D GK+TLT+ ++   G
Sbjct: 27  SIRNVGIIAHIDAGKTTLTEKMLYYGG 53


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 52.4 bits (120), Expect = 6e-08
 Identities = 22/52 (42%), Positives = 33/52 (63%)
 Frame = +1

Query: 349 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAI 504
           K F    ID+PGHVDF  EV A + ++DG ++VV+   GV + T  +++ AI
Sbjct: 207 KTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHAI 258


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 48.8 bits (111), Expect = 7e-07
 Identities = 19/44 (43%), Positives = 32/44 (72%)
 Frame = +1

Query: 349 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQT 480
           + +L+NLID+PGHVDF +EV  +L   +G +++V+ + G+  QT
Sbjct: 122 QSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGIQAQT 165



 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 25/70 (35%), Positives = 40/70 (57%)
 Frame = +2

Query: 77  IRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCT 256
           +RG+   +  +RN +VIAH+DHGKSTL+D ++   G+I        +F D  K E +R  
Sbjct: 50  VRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLD--KLEVERRR 104

Query: 257 PLNLRPSLCS 286
            + ++   CS
Sbjct: 105 GITVKAQTCS 114


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 35.1 bits (77), Expect = 0.009
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +1

Query: 370 IDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQT 480
           +D PGH D+   +       DGA++VV  T G   QT
Sbjct: 121 VDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQT 157



 Score = 30.3 bits (65), Expect = 0.26
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 95  KKRNIRNMSVIAHVDHGKSTLTDSL 169
           KK ++ N+  I HVDHGK+TLT ++
Sbjct: 50  KKPHV-NIGTIGHVDHGKTTLTAAI 73


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score = 33.9 bits (74), Expect = 0.021
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +2

Query: 89  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32


>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score = 33.9 bits (74), Expect = 0.021
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +2

Query: 89  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 33.9 bits (74), Expect = 0.021
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +2

Query: 89  MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
           M K++   N+ VI HVD GKST T  L+ K G
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32


>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1283

 Score = 29.1 bits (62), Expect = 0.61
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +1

Query: 382 GHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADASSL 522
           G V F S +TA    + GA++VVE T+G    TET++  +I   S++
Sbjct: 780 GSVSFMSTITAH-DTSSGAVIVVEPTAGTV--TETIVSGSIPFTSTI 823


>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 374

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 20/87 (22%), Positives = 40/87 (45%)
 Frame = -1

Query: 527 QNRLDASAIA*RSTVSVCTHTPDVRSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPF 348
           Q  + +S+++  ++ S  +      +TTT +PS + S++ +S   S+    S        
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183

Query: 347 SLFSHWSGFVMNTKSFSSSSKNIEMAV 267
           S  S  S    ++ S SSSS +  + +
Sbjct: 184 SSSSSSSSSSSSSSSSSSSSSSSSVPI 210


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 27.9 bits (59), Expect = 1.4
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 116 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 217
           ++++ HVDHGK+TL D+   K+ I +    G T+
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQ 206



 Score = 27.9 bits (59), Expect = 1.4
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 361 INLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLR 495
           I  +D+PGH+ F +       + D  ++VV    GV  QT   ++
Sbjct: 222 ITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTVEAIK 266


>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
           endonuclease Cce1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 258

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 353 PFSLFSHWSGFVMNTK-SFSSSSKNIEMAVDLM 258
           P S +S+W+  V+NTK SFS     ++M  +L+
Sbjct: 168 PKSTYSYWAS-VLNTKASFSKKKSRVQMVKELI 199


>SPCC4B3.18 |||phosphopantothenate-cysteine
           ligase|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 316

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 27/102 (26%), Positives = 50/102 (49%)
 Frame = +1

Query: 289 ELEEKDLVFITNPDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGV 468
           E+++ +  F  NP  C  S  G + +LI+   ++  +S+   A   + G LV +E+ +  
Sbjct: 3   EMDKSNDFFEENP--CPNS-LGDVSSLIEDFINLQSNSQ-NIAFVTSGGTLVPLEQNTVR 58

Query: 469 CVQTETVLRQAIADASSLFCS*TKWTVLFLSSNLKLKNYTRR 594
            +   +   +  A A   FC  + ++V+FL  N  L  +TRR
Sbjct: 59  FIDNFSAGNRGAASAE-YFCK-SGYSVIFLYRNYSLMPFTRR 98


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 26.2 bits (55), Expect = 4.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGII 190
           N+  I HVD GKSTL  +++   G++
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV 265


>SPBC19F5.03 |||inositol polyphosphate phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 598

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 109 DIPLLVHHPTDLVYREIHHFRWFMIFVLLNQL 14
           D P + +H  D  ++E  H RW  + +LLN++
Sbjct: 318 DNPHIHYHYFDF-HKECSHMRWDRVSLLLNEI 348


>SPCC1235.05c |fft2||fun thirty related protein
           Fft2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1284

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 104 SASCPSSHGSRLP*NSPF*MVYDFCSIK 21
           +ASCP SH   L  + PF  + + C IK
Sbjct: 417 TASCPLSHSKLLLEHRPFQTLAEACIIK 444


>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 566

 Score = 25.4 bits (53), Expect = 7.5
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 138 ITASQPSRTRWFPR-PVSLLVREPERPVSLTRVRTNK 245
           +T    S T + P  P S + REP  P+S  R+R+++
Sbjct: 48  LTPEPSSNTFYAPSSPASAVRREPLSPMSFVRMRSHR 84


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 113 NMSVIAHVDHGKSTLTDSL 169
           N+  I HV HGKST+  ++
Sbjct: 25  NIGTIGHVAHGKSTVVKAI 43


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +2

Query: 32  KNHKPSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 190
           K   P+ +V+  V EI    + K  + ++ V  HVD GKST+   ++ + G I
Sbjct: 155 KKQNPTDLVS--VPEIFEQSNPKPVV-HLVVTGHVDSGKSTMLGRIMFELGEI 204


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 25.0 bits (52), Expect = 9.9
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = +1

Query: 367 LIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLR 495
           +ID+PGH  F++  +    + + A++V++   G+  QT   +R
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIESIR 595


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,772,454
Number of Sequences: 5004
Number of extensions: 54903
Number of successful extensions: 200
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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