Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20823
(671 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 33 0.003
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 33 0.003
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 31 0.008
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 29 0.053
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 29 0.053
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.50
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.6
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 21 8.1
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 21 8.1
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 21 8.1
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 21 8.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 8.1
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 27.5 bits (58), Expect = 0.12
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVV 450
+ + +ID+PGH DF + D A+++V
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 116
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCG 32
Score = 28.7 bits (61), Expect = 0.053
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSG 465
+ + +ID+PGH DF + D A+++V +G
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 121
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 31.5 bits (68), Expect = 0.008
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 346 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQT 480
E G + +D+PGH F S +TD ++VV GV QT
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQT 234
Score = 29.5 bits (63), Expect = 0.030
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 116 MSVIAHVDHGKSTLTDSL 169
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 28.7 bits (61), Expect = 0.053
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSG 465
+ + +ID+PGH DF + D A+++V +G
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 48
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 28.7 bits (61), Expect = 0.053
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSG 465
+ + +ID+PGH DF + D A+++V +G
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 64
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.50
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSL 169
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 274 ISMFFELEEKDLVFITNPDQCEKSEKGFLI 363
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 274 ISMFFELEEKDLVFITNPDQCEKSEKGFLI 363
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.6
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -2
Query: 94 VHHPTDLVYREIHH 53
+HHP + R++HH
Sbjct: 400 LHHPNCKINRKVHH 413
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 382 GHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADASS 519
GHV +E T D + ++ R V Q ET+L ++A S
Sbjct: 88 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSEADS 133
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 382 GHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADASS 519
GHV +E T D + ++ R V Q ET+L ++A S
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSEADS 181
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 382 GHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADASS 519
GHV +E T D + ++ R V Q ET+L ++A S
Sbjct: 136 GHVVTINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSEADS 181
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 21.4 bits (43), Expect = 8.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 382 GHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADASS 519
GHV +E T D + ++ R V Q ET+L ++A S
Sbjct: 136 GHVVAINETTYTDGSDDYSTLIRVRVIDVRPQNETILTTVSSEADS 181
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 606 QYAGTSGIVLQLQVG 562
+Y SG+V+QLQ G
Sbjct: 1549 EYGAVSGLVVQLQRG 1563
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,274
Number of Sequences: 438
Number of extensions: 3993
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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