Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20823
(671 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 105 4e-23
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 69 4e-12
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 68 7e-12
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 68 7e-12
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 64 8e-11
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 60 1e-09
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 57 9e-09
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 56 3e-08
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 56 3e-08
At5g13650.2 68418.m01585 elongation factor family protein contai... 55 4e-08
At5g13650.1 68418.m01584 elongation factor family protein contai... 53 2e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 53 2e-07
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 45 5e-05
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 35 0.043
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 34 0.099
At3g06620.1 68416.m00769 protein kinase family protein contains ... 33 0.23
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 32 0.30
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 32 0.30
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 32 0.30
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 32 0.30
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 32 0.30
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 32 0.30
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 32 0.30
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 31 0.53
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.6
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 2.8
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 29 2.8
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 29 3.7
At2g19170.1 68415.m02237 subtilase family protein contains simil... 28 4.9
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 28 4.9
At1g33910.1 68414.m04203 avirulence-responsive family protein / ... 28 4.9
At1g12080.2 68414.m01397 expressed protein 28 4.9
At1g12080.1 68414.m01396 expressed protein 28 4.9
At3g44690.1 68416.m04806 expressed protein 28 6.5
At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical t... 28 6.5
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 27 8.6
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 27 8.6
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 105 bits (251), Expect = 4e-23
Identities = 53/85 (62%), Positives = 65/85 (76%)
Frame = +1
Query: 256 TIKSTAISMFFELEEKDLVFITNPDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 435
TIKST IS+++E+ ++ L T + +LINLIDSPGHVDFSSEVTAALR+TDG
Sbjct: 69 TIKSTGISLYYEMTDESLKSFTGA----RDGNEYLINLIDSPGHVDFSSEVTAALRITDG 124
Query: 436 ALVVVERTSGVCVQTETVLRQAIAD 510
ALVVV+ GVCVQTETVLRQA+ +
Sbjct: 125 ALVVVDCIEGVCVQTETVLRQALGE 149
Score = 99.1 bits (236), Expect = 2e-21
Identities = 48/66 (72%), Positives = 53/66 (80%)
Frame = +2
Query: 53 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 232
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 233 KDEQDR 250
DE +R
Sbjct: 61 ADEAER 66
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +3
Query: 510 RIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYND 644
RI+P+L +NKMDR YQTF R++EN NVI+ATY D
Sbjct: 150 RIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYED 194
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = +1
Query: 349 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQA 501
K + +NLIDSPGH+DF SEV+ A R++DGALV+V+ GV +QT VLRQA
Sbjct: 72 KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +2
Query: 101 RNIRNMSVIAHVDHGKSTLTDSLV--SKAGIIAGARAGETRFTDTRKDEQDRCTPLNLRP 274
R +RN+ ++AHVDHGK+TL D L+ S G++ AG+ RF D +EQ R + ++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRA--ITMKS 64
Query: 275 SLCSSSLKRK 304
S S SLK K
Sbjct: 65 S--SISLKYK 72
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 501 YCRRIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD 647
+ ++ P L +NK+DR Y RIV VN I++ Y +
Sbjct: 123 WIEKLTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVSAYKSE 171
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +1
Query: 337 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIAD 510
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+++V+ GV V TE +R AI D
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQD 260
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 83 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 250
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQER 188
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 67.7 bits (158), Expect = 7e-12
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +1
Query: 337 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIAD 510
+ K +L N++D+PGHV+FS E+TA+LR+ DGA+++V+ GV V TE +R AI D
Sbjct: 203 DSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQD 260
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 83 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 250
G+M +RN++++ H+ HGK+ D LV + ++ A ++TDTR DEQ+R
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQER 188
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 64.1 bits (149), Expect = 8e-11
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +1
Query: 337 EKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIAD 510
+ K +L N++D+PG+V+FS E+TA+LR+ DGA+ +V+ GV V TE +R AI D
Sbjct: 189 DSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAIQD 246
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 83 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA---GETRFTDTRKDEQDR 250
G+M +RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQER 174
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 262 KSTAISMFFELEEKDLVFITNPDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 441
+ TA + E E++ + IT+ +K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189
Query: 442 VVVERTSGVCVQTETVLRQA 501
+ + +GV Q+ETV RQA
Sbjct: 190 CLFDSVAGVEPQSETVWRQA 209
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 101 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDR 250
++ RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQER 145
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 57.2 bits (132), Expect = 9e-09
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +1
Query: 256 TIKSTAISMFFELEEKDLVFITNPDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 435
T+K+ +MF+E + +D + G+L+NLID+PGHVDFS EV+ +L G
Sbjct: 113 TVKAQTATMFYENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQG 161
Query: 436 ALVVVERTSGVCVQT 480
AL+VV+ GV QT
Sbjct: 162 ALLVVDAAQGVQAQT 176
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2
Query: 107 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQ 244
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D + E+
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLDKLQRER 110
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +1
Query: 349 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQ 498
K + +N+ID+PGHVDF+ EV ALRV DGA++V+ GV Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 190
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +1
Query: 349 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQ 498
K + +N+ID+PGHVDF+ EV ALRV DGA++V+ GV Q+ TV RQ
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQ 180
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 190
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +2
Query: 44 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT 223
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A + + + R
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIM 121
Query: 224 DTRKDEQDR-CTPLNLRPSLCSSSLKRKI 307
D+ E++R T L+ S+ + K I
Sbjct: 122 DSNDLERERGITILSKNTSITYKNTKVNI 150
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +1
Query: 349 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAI 504
K +N+ID+PGH DF EV L + DG L+VV+ G QT VL++A+
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 195
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR-CTPLN 265
+D++ N+RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R T L+
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILS 135
Query: 266 LRPSLCSSSLKRKI 307
S+ + K I
Sbjct: 136 KNTSITYKNTKVNI 149
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/52 (44%), Positives = 32/52 (61%)
Frame = +1
Query: 349 KGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAI 504
K +N+ID+PGH DF EV L + DG L+VV+ G QT VL++A+
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKAL 194
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQT 480
F +NLID+PGHVDFS EV+ +L +GAL+VV+ + GV QT
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQT 193
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +2
Query: 104 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCTPLNLR 271
NIRN S+IAH+DHGKSTL D L+ G + R + +F D E++R + L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQ 139
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 59 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKD 238
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A + D +
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPE 122
Query: 239 EQDRCTPLN 265
E+ R +N
Sbjct: 123 ERARGITIN 131
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 370 IDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTE 483
+D PGH D+ + DGA++VV G QT+
Sbjct: 147 VDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTK 184
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 35.1 bits (77), Expect = 0.043
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 370 IDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADA 513
+D+PGH F + RVTD A++VV G+ QT + A A A
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAA 604
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 116 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 217
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 346 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQA 501
+ G I +D+PGH FS VTD ++VV GV QT + A
Sbjct: 265 DSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHA 316
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 116 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 208
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At3g06620.1 68416.m00769 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 773
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = -1
Query: 566 LELKKSTVHFVHEQNRLDASAIA*RSTVSVCTHTPDVRSTTTRAPSVTRSAAVTSEEKST 387
LEL++S H E +RL S + + SV H P R+ APS +S A + S
Sbjct: 14 LELEESQEHLKQEMSRLKVSTELRQRSHSVSPHRPARRNIGEGAPSWRKSGAASFRNASP 73
Query: 386 CPGES 372
ES
Sbjct: 74 LRKES 78
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSG 465
+ +ID+PGH DF + D A+++++ T+G
Sbjct: 85 YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 367 LIDSPGHVDFSSEVTAALRVTDGALVVVERTSG 465
L+DSPGH DF + A D A++V++ + G
Sbjct: 321 LLDSPGHKDFVPNMIAGATQADAAILVIDASVG 353
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIA 193
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 521 RLDASAIA*RSTVSVCTHTPDVRSTTTRAPSVTRSAAVTSEEKS 390
++D+ A T S T PD ST T APSVT+ + + EK+
Sbjct: 372 KVDSEACQNHPTASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 521 RLDASAIA*RSTVSVCTHTPDVRSTTTRAPSVTRSAAVTSEEKS 390
++D+ A T S T PD ST T APSVT+ + + EK+
Sbjct: 633 KVDSEACQNHPTASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSG 465
+ +ID+PGH DF + D A+++++ T+G
Sbjct: 85 YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSG 465
+ +ID+PGH DF + D A+++++ T+G
Sbjct: 85 YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 89 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 184
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLG 32
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 355 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVERTSG 465
+ +ID+PGH DF + D A+++++ T+G
Sbjct: 85 YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 121
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 370 IDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQT-ETVLRQAIADASSLFC 528
+D PGH D+ + DG ++VV G QT E +L SL C
Sbjct: 135 VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQTKEHILLARQVGVPSLVC 188
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 113 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 250
N+ I HVDHGK+TLT ++ A+A D +E+ R
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKR 114
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 126 SPTSITASQPSRTRWFPRPVSLLVRE 203
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 126 SPTSITASQPSRTRWFPRPVSLLVRE 203
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 367 LIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQT 480
+ID+PGH F++ + + D A++VV+ T G+ QT
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVVDITHGLQPQT 150
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 512 ASAIA*RSTVSVCTHTPDVRSTTTRAPSVTRSAAVTSEEKS 390
AS+ ST T T + STT APS T+S AV + +
Sbjct: 80 ASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSIAVPASNST 120
>At2g19170.1 68415.m02237 subtilase family protein contains
similarity to meiotic serine proteinase TMP GI:6468325
from [Lycopersicon esculentum]
Length = 815
Score = 28.3 bits (60), Expect = 4.9
Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Frame = -1
Query: 458 VRSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSHWSGFVMNTKSFSSSSK-N 282
+ T+ AP + AA+ ++ +IK S +G ++ + +S +
Sbjct: 592 ISGTSMAAPHIAGIAALVKQKHPQWSPAAIKSALMTTSTVIDRAGRLLQAQQYSDTEAVT 651
Query: 281 IEMAVDLMVCNGLVRPYACQ*NGSLRLSHQQ*YRPWKPTSP*GLTCRDRRGRSQTCCGYS 102
+ A +G V P A G + + + Y + T+P G++ + R + T C Y
Sbjct: 652 LVKATPFDYGSGHVNPSAALDPGLIFDAGYEDYLGFLCTTP-GISAHEIRNYTNTACNYD 710
Query: 101 ASCPSS 84
PS+
Sbjct: 711 MKHPSN 716
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 361 INLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADASSL 522
++ +D PGH + + + DGAL+++ + C Q +T A D L
Sbjct: 121 VSFVDCPGHDILMATMLNGAAIMDGALLII-AANETCPQPQTAEHLASVDMMHL 173
>At1g33910.1 68414.m04203 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 301
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Frame = +1
Query: 310 VFITNPDQCE----KSEKGFLINLIDSPGHVDFS-------SEVTAALRVTDGALVVV 450
VFI +C+ K+ G +IN+ID+PG D S E+ L +TDG L V
Sbjct: 38 VFILETVECKTCKAKTLDGQIINVIDTPGLFDLSVSTDYMNKEIINCLTLTDGGLHAV 95
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 479 VCTHTPDVRSTTTRAPSVTRSAAVTSEEKST 387
V T TP V +A VT + AV EEK T
Sbjct: 85 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 115
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 479 VCTHTPDVRSTTTRAPSVTRSAAVTSEEKST 387
V T TP V +A VT + AV EEK T
Sbjct: 51 VITETPVVEEEEKKAEEVTETPAVVEEEKKT 81
>At3g44690.1 68416.m04806 expressed protein
Length = 1176
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 286 FELEEKDLVFITNPDQCEKSEKGFLINLIDSPGHVDFS 399
F EE+ +V++ N +C+ K +L + +DS ++DFS
Sbjct: 380 FRNEERKVVYLDN--KCQVLRKDYLYDGVDSKKNLDFS 415
>At1g02280.1 68414.m00169 GTP-binding protein (TOC33) identical to
atToc33 protein (GI:11557973) [Arabidopsis thaliana];
Carboxyl-terminal end highly similar to GTP-binding
protein SP:U43377, location of EST gb|AA394770 and
gb|R30089; identical to cDNA for chloroplast atToc33
protein GI:11557972
Length = 297
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 325 PDQCEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALV 444
P ++ GF IN+ID+PG V+ AL + G LV
Sbjct: 74 PVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLV 113
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 361 INLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADASSL 522
++ +D PGH + + + DGAL+++ C Q +T A D L
Sbjct: 129 VSCVDCPGHDILMATMLNGAAIVDGALLLIAANES-CPQPQTAEHLASVDMMRL 181
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 361 INLIDSPGHVDFSSEVTAALRVTDGALVVVERTSGVCVQTETVLRQAIADASSL 522
++ +D PGH + + + DGAL+++ C Q +T A D L
Sbjct: 129 VSCVDCPGHDILMATMLNGAAIVDGALLLIAANES-CPQPQTAEHLASVDMMRL 181
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,660,791
Number of Sequences: 28952
Number of extensions: 292350
Number of successful extensions: 923
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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