Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20822
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 56 2e-08
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 56 3e-08
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 55 5e-08
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 46 2e-05
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 43 3e-04
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 42 6e-04
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.024
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.042
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.055
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 33 0.29
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.2
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 29 2.7
SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_7461| Best HMM Match : Gastrin (HMM E-Value=2.2) 28 6.3
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 28 6.3
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 28 8.4
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 28 8.4
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 18/100 (18%)
Frame = +2
Query: 8 TVLGVIPYAGVSFFTYETLKHKYTEHFGP-----PQY------ALSSVLCGGAAGALAQT 154
T L +IP G+ F+ +E+ K + G P+ A +LCG AGA +QT
Sbjct: 63 TSLSMIPAVGIGFYAFESFKDFFVAMKGVLTRIHPETGETVLTAPGGLLCGALAGATSQT 122
Query: 155 ASYPLDIVRRRMQT-------RSYPTMLATFRAVYTTEDG 253
+YPLD+VRRRMQ Y T + TF +VY TEDG
Sbjct: 123 LAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVY-TEDG 161
Score = 34.7 bits (76), Expect = 0.073
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 116 VLCGGAAGALAQTASYPLDIVRRRM-----QTRSYPTMLATFRAVYTTEDG 253
++ GG AG A + +YPLDIVR R+ +Y + T + ++ TE G
Sbjct: 2 IVAGGLAGLTACSCTYPLDIVRSRLAFQVADEHTYCGICQTVKQIFMTEGG 52
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 11/73 (15%)
Frame = +2
Query: 8 TVLGVIPYAGVSFFTYETLKHKYTE------HFGP----PQYAL-SSVLCGGAAGALAQT 154
T+L ++P G+ F+ +ET+K + E + P P+ ++ +CGG AGA++QT
Sbjct: 129 TLLTIVPAMGIGFYMFETMKAYFLETRIAFTNTNPDTLCPELSIIGGFVCGGVAGAVSQT 188
Query: 155 ASYPLDIVRRRMQ 193
+YPLD+VRRRMQ
Sbjct: 189 IAYPLDVVRRRMQ 201
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = +2
Query: 5 ATVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRR 184
A +L PY V F +YE Y++ A++ ++ G AG A +YPLD+VR
Sbjct: 35 AMMLRTFPYGAVQFLSYE----HYSKVLQTSSPAINKLVAGSLAGMTACACTYPLDMVRS 90
Query: 185 RM-----QTRSYPTMLATFRAVYTTEDG 253
R+ Q + Y T+ T R + E G
Sbjct: 91 RLAFQVAQDQGYTTITQTIRCISVKEGG 118
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Frame = +2
Query: 17 GVIPYAGVSFFTYETLK-------------HKY-TEHFGPPQYALSSVLCGGAAGALAQT 154
G+ PY G++F YET+K HK T H ++ + CG AGA+AQ+
Sbjct: 638 GIAPYIGLNFMVYETMKGLCMDFYTARAAGHKLRTIHHDLELPVVAKLFCGAVAGAVAQS 697
Query: 155 ASYPLDIVRRRMQTRSYPTMLATFRAVYTTEDGGILQRSEHELG 286
+YPLD+VRRRMQ M F+ T + ++ RSE +G
Sbjct: 698 GTYPLDVVRRRMQMERGEGM---FKYSSTWDGFKVIVRSEGFIG 738
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Frame = +2
Query: 8 TVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVL----CGGAAGALAQTASYPLDI 175
++LG+IPYAG+ YETLK+ Y ++ Q A VL CG A+ Q ASYPL +
Sbjct: 292 SLLGIIPYAGIDLAVYETLKNFYL-NYHKNQSADPGVLVLLACGTASSTCGQLASYPLSL 350
Query: 176 VRRRMQTRS 202
VR R+Q ++
Sbjct: 351 VRTRLQAQA 359
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 5 ATVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRR 184
A V+ + P +G+ FF YE K K +L G AG +QT+ YPL++++
Sbjct: 198 ANVIKIAPESGIKFFAYEKAK-KLVGSDTKALGVTDRLLAGSMAGVASQTSIYPLEVLKT 256
Query: 185 RM---QTRSYPTMLATFRAVYTTE 247
R+ +T Y +L +Y E
Sbjct: 257 RLAIRKTGQYRGLLHAASVIYQKE 280
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 14/75 (18%)
Frame = +2
Query: 17 GVIPYAGVSFFTYETLK-HKYTEHFGPPQYA-LSSV------------LCGGAAGALAQT 154
G+ PY G++F YETLK ++ Q A L+++ +CG AGA++QT
Sbjct: 118 GIAPYVGLNFAVYETLKGFLFSTVMASSQGASLTNIRKDRELPVNFKLMCGSLAGAVSQT 177
Query: 155 ASYPLDIVRRRMQTR 199
A+YPLD+VRRRMQ +
Sbjct: 178 ATYPLDVVRRRMQMK 192
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +2
Query: 14 LGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRRMQ 193
LG+ P+AG SF Y+ L + P + + G AGA A T S+P D +R++MQ
Sbjct: 220 LGLFPFAGGSFLAYQILDKVDSTRTEPSATPICMFVNGCVAGAFAHTLSHPFDTIRKKMQ 279
Query: 194 TRSYPTMLAT 223
++T
Sbjct: 280 LTGKEVSIST 289
Score = 35.5 bits (78), Expect = 0.042
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 29 YAGVSFFTY-ETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRRMQT--- 196
+ GV +Y +TL F S LCGG + LA++ + PL++V+ Q
Sbjct: 32 HTGVCLASYVKTLPDMVNTAFDARITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQVGTQ 91
Query: 197 RSYPTMLATFRAVYTTE 247
+ P ++ TF +VY E
Sbjct: 92 EAKPGLIRTFASVYKRE 108
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +2
Query: 8 TVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRR 187
+++ + P+ GV Y+ +K + + + ++CG AG +AQT +PLD+VRR+
Sbjct: 95 SLVSIAPFLGVQQSVYDIMKLRALDSAFAANSG-TFLVCGAIAGMIAQTVVHPLDVVRRQ 153
Query: 188 MQ 193
MQ
Sbjct: 154 MQ 155
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 26 PYAGVSFFTYE-TLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRRMQTRS 202
P +S Y +L++ ++ P L + G AG +A +++PLD+VR R+ +
Sbjct: 1 PLHDISNLGYSLSLQYTPVDNDKNPHQPLWRFVSGATAGVVATASTHPLDVVRARLTVQD 60
Query: 203 YPT 211
T
Sbjct: 61 MST 63
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 8 TVLGVIPYAGVSFFTYETLKHKYTEHF 88
T++G++PYAG+SFFTYET K + E +
Sbjct: 51 TLIGIMPYAGISFFTYETCKKAFGEFY 77
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +2
Query: 14 LGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRRMQ 193
+G+I Y G F Y+TLK G + S + G A ASYP+D +RRRM
Sbjct: 184 VGIIVYRGFYFGLYDTLKPIL---LGEDAGVVISFVLGYGVTVSAGLASYPIDTIRRRMM 240
Query: 194 TRS 202
S
Sbjct: 241 MTS 243
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 36.3 bits (80), Expect = 0.024
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +2
Query: 5 ATVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALS-SVLCGGAAGALAQTASYPLDIVR 181
ATV P++G+ Y +K + + +CG AGA+A + P D+V+
Sbjct: 489 ATVARDAPFSGLYLMFYTQIKRRAKGLLQVGDLTSGQNFICGIMAGAMASVVTQPADVVK 548
Query: 182 RRMQTRSYPTMLATFRAVYTTEDGGI 259
R+Q Y V E GGI
Sbjct: 549 TRLQMNPYMYPSNRAAVVAIIEAGGI 574
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 35.5 bits (78), Expect = 0.042
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 8 TVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRR 187
T + IP V F YE L ++ FG A + ++ GG AG ++ +++P D+++ R
Sbjct: 101 TAVRDIPGFAVYFGVYELLCDWFSNLFGSRGVA-TYLMAGGFAGVVSWASTFPFDVIKSR 159
Query: 188 MQ 193
+Q
Sbjct: 160 IQ 161
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 20 VIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRRMQTR 199
VI A S E + K + P L + + G AAGA A +PLD ++ R+Q
Sbjct: 10 VITSATYSEVNMEVSQEKEIDFTRPKFSVLKNSIAGSAAGAAANLVGFPLDTIKVRLQAM 69
Query: 200 SYP 208
P
Sbjct: 70 PLP 72
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 29 YAGVSFFT-YETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRRM 190
+AG + T YE ++ K ++ Y + L GG A + QT + P+DI+ +++
Sbjct: 83 FAGQCYITTYELVRSKTAQY----NYTIRGFLAGGCASIVGQTITVPVDIISQKL 133
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 95 PQYALSSVLCGGAAGALAQTASYPLDIVRRRMQTRSYPTMLATFRAV 235
P + S+ CG +G +++ P DI+++R+Q + + +F V
Sbjct: 26 PADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRV 72
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 38 VSFFTYETLKHKYTEHFGPPQY-ALSSVLCGGAAGALAQTASYPLDIVRRRMQ 193
+ FF Y LK A+ + L GG AGA + + P+D+V+ RMQ
Sbjct: 212 IRFFVYSNLKSWLQGGDSSKDIGAVKTFLIGGVAGAASVFGNTPVDVVKTRMQ 264
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 38 VSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRRM 190
V+ TY+T+KH +H + + +G +A T S P D+++ R+
Sbjct: 278 VNLTTYDTVKHNLLKHTRLEDNWIVHSMSSVCSGLVAATISTPADVIKTRI 328
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 113 SVLCGGAAGALAQTASYPLDIVRRRMQ 193
SV+ G +AGAL Q S P D+V+ +MQ
Sbjct: 134 SVISGMSAGALGQFISSPTDLVKVQMQ 160
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 23 IPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTASYPLDIVRRRMQTRS 202
IP++ + F + L K + G + + G AG A A PLD+++ R+Q +
Sbjct: 178 IPFSCIYFPLFAYLNLKSIDMHGGKPPLIYCLGAGCLAGMTASVAVNPLDVIKTRLQLLN 237
Query: 203 YP 208
P
Sbjct: 238 RP 239
>SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Frame = +2
Query: 5 ATVLGVIPYAGVSFFTYETLKHKYTEHFGPP---QYALSS-VLCGGAAGALAQTASYPLD 172
A+ LG I G+ F YE LK + Q+ L+ L G+A ++ YP +
Sbjct: 907 ASYLGSIE-VGLHFAIYENLKQQLLRSQNKTNDHQFTLAECTLAAGSAKVVSTGPCYPYE 965
Query: 173 IVRRRMQTRS--------YPTMLATFRAVYTTEDGGIL 262
+VR R++ + Y T L T + G +L
Sbjct: 966 VVRTRLRQQESDVLRKTRYRTCLQTLGLCFVERGGSVL 1003
>SB_7461| Best HMM Match : Gastrin (HMM E-Value=2.2)
Length = 312
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 147 ASAPAAPPHSTLLSAYCGG-PKCSVYLCLRVSYVKKETPAYG 25
++ PA H T L YCGG P+ SV + L V E P YG
Sbjct: 252 STPPAMRYHRT-LEGYCGGIPRGSVRVELWVGSCPGEKPGYG 292
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 128 GAAGALAQTASYPLDIVRRRMQTRSYPTMLATF-RAVYTTED 250
G A ++A+ A+ P+D + R+Q + ++A+ + V TT D
Sbjct: 22 GIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHD 63
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 23 IPYAGVSFFTYETLKHKYTEHFG-PPQYALSSVLCGGAAGALAQTASYPLDIVRRRMQTR 199
IP+ + F YE + G P+ + V+ G AGA+A + PLD+ + + T+
Sbjct: 63 IPFQTLHFTVYEYARKALNPLGGYDPK---THVIAGATAGAVASAITTPLDVAKTLLNTQ 119
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 27.9 bits (59), Expect = 8.4
Identities = 8/30 (26%), Positives = 21/30 (70%)
Frame = +2
Query: 116 VLCGGAAGALAQTASYPLDIVRRRMQTRSY 205
++ GG G++ A+ PL++++ R+Q+ ++
Sbjct: 709 LVAGGLGGSMGALATIPLEVIQTRLQSSAF 738
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,831,607
Number of Sequences: 59808
Number of extensions: 426115
Number of successful extensions: 1459
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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