Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20822
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    31   0.035
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    31   0.035
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    30   0.061
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.0  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.3  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   5.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   7.0  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    23   9.2  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    23   9.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   9.2  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 0.035
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = +2

Query: 8   TVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTAS----YPLDI 175
           +V G+I Y    F  ++T K         P    +S+    A   +  TAS    YP D 
Sbjct: 182 SVQGIIIYRAAYFGCFDTAKGML------PDPKNTSIFVSWAIAQVVTTASGIISYPFDT 235

Query: 176 VRRRMQTRSYP 208
           VRRRM  +S+P
Sbjct: 236 VRRRMMMQSWP 246



 Score = 30.3 bits (65), Expect = 0.061
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 98  QYALSSVLCGGAAGALAQTASYPLDIVRRRM 190
           +Y L ++  GGAAGA +    YPLD  R R+
Sbjct: 113 RYFLGNLGSGGAAGATSLCFVYPLDFARTRL 143


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 31.1 bits (67), Expect = 0.035
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = +2

Query: 8   TVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTAS----YPLDI 175
           +V G+I Y    F  ++T K         P    +S+    A   +  TAS    YP D 
Sbjct: 182 SVQGIIIYRAAYFGCFDTAKGML------PDPKNTSIFVSWAIAQVVTTASGIISYPFDT 235

Query: 176 VRRRMQTRSYP 208
           VRRRM  +S+P
Sbjct: 236 VRRRMMMQSWP 246



 Score = 30.3 bits (65), Expect = 0.061
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 98  QYALSSVLCGGAAGALAQTASYPLDIVRRRM 190
           +Y L ++  GGAAGA +    YPLD  R R+
Sbjct: 113 RYFLGNLGSGGAAGATSLCFVYPLDFARTRL 143


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 0.061
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 98  QYALSSVLCGGAAGALAQTASYPLDIVRRRM 190
           +Y L ++  GGAAGA +    YPLD  R R+
Sbjct: 113 RYFLGNLGSGGAAGATSLCFVYPLDFARTRL 143



 Score = 27.5 bits (58), Expect = 0.43
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +2

Query: 8   TVLGVIPYAGVSFFTYETLKHKYTEHFGPPQYALSSVLCGGAAGALAQTAS----YPLDI 175
           +V G+I Y    F  ++T K         P    +S+    A   +  TAS    YP D 
Sbjct: 182 SVQGIIIYRAAYFGCFDTAKGML------PDPKNTSIFVSWAIAQVVTTASGIISYPFDT 235

Query: 176 VRRRMQTRS 202
           VRRRM  +S
Sbjct: 236 VRRRMMMQS 244


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 244 GRVDGAEGGQHGG 206
           GRV   EGG+HGG
Sbjct: 215 GRVGEGEGGEHGG 227


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -1

Query: 445 ASS*TTPSVERESELHSADV 386
           +SS + PS +++ +LHSADV
Sbjct: 16  SSSSSKPSPQQQQQLHSADV 35


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -1

Query: 445 ASS*TTPSVERESELHSADV 386
           +SS + PS +++ +LHSADV
Sbjct: 16  SSSSSKPSPQQQQQLHSADV 35


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 103 VLRGTEVLCVLVLEGFVREEGDAGVRDDPEHG 8
           +L G +    L   G   + G+AGV DD +HG
Sbjct: 572 LLSGPDPRSALGGNGSGGDRGNAGVPDDTKHG 603


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
 Frame = -2

Query: 441 HRKQRHLW------KGSRNYTLQMWSALALQRHRQVPERPLDGVVRGEGYADRXS 295
           HR    LW         R+    ++++L + ++R   ERP D +VRG     R S
Sbjct: 138 HRGGHRLWFDTAEIDAERDNNQLLYASLRMYKNRTT-ERPWDAIVRGRQIVVRAS 191


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 147 ASAPAAPPHSTLLSAYCGGPKC 82
           AS P  PP     S  C  PKC
Sbjct: 77  ASGPQGPPGKNCTSGGCCLPKC 98


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 256 PAIFGRVDGAEGGQHGGVAAGL 191
           P   G VD  +GG H G  AG+
Sbjct: 4   PMRSGFVDSVQGGHHLGSEAGM 25


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -1

Query: 256 PAIFGRVDGAEGGQHGGVAAGL 191
           P   G VD  +GG H G  AG+
Sbjct: 4   PMRSGFVDSVQGGHHLGSEAGM 25


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 207 PPCWPPSAPSTRPK 248
           P  WP S P+++PK
Sbjct: 285 PTSWPRSRPTSKPK 298


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,975
Number of Sequences: 2352
Number of extensions: 14465
Number of successful extensions: 38
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)