Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20821
(713 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 138 3e-33
SB_23214| Best HMM Match : zf-CW (HMM E-Value=9.6) 72 4e-13
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 63 2e-10
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 62 4e-10
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 51 8e-07
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 43 3e-04
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 43 3e-04
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 43 3e-04
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 41 0.001
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 36 0.025
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 36 0.025
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 33 0.23
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 33 0.30
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 33 0.30
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 32 0.53
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 32 0.53
SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_5867| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_19511| Best HMM Match : Glycos_transf_1 (HMM E-Value=6.2e-23) 28 6.5
SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01) 28 6.5
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_11166| Best HMM Match : CARD (HMM E-Value=0.001) 28 8.6
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 138 bits (335), Expect = 3e-33
Identities = 60/79 (75%), Positives = 71/79 (89%)
Frame = +2
Query: 41 ELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKIS 220
EL+++R+SG K+FRD++VDESNIL WQGLIVP+ PPYNKGAFRIEI FPAEYPFKPPKI+
Sbjct: 1 ELDELRKSGTKTFRDVKVDESNILYWQGLIVPEMPPYNKGAFRIEICFPAEYPFKPPKIT 60
Query: 221 FKTKIYHPNIDERVRCACP 277
FKTKIYHPNIDE+ + P
Sbjct: 61 FKTKIYHPNIDEKGQVCLP 79
Score = 134 bits (325), Expect = 5e-32
Identities = 67/105 (63%), Positives = 79/105 (75%)
Frame = +1
Query: 160 CFPH*D*LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALV 339
CFP + P + P+ F+ K P KGQVCLPIIS ENWKPATKT+QVIQAL+
Sbjct: 47 CFP------AEYPFKPPKITFKTKIYHPNIDEKGQVCLPIISPENWKPATKTEQVIQALL 100
Query: 340 ALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEKRPTD 474
ALV+DPEPEHPLRA+LAEE+ KD+KKF KNAE+ TKK+ EKRP D
Sbjct: 101 ALVHDPEPEHPLRADLAEEYSKDKKKFMKNAEDCTKKYGEKRPAD 145
>SB_23214| Best HMM Match : zf-CW (HMM E-Value=9.6)
Length = 69
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = +2
Query: 8 CTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVP 136
C MAAT+RL KEL+++R+SG K+FRD++VDESNIL WQGLIVP
Sbjct: 27 CVMAATKRLGKELDELRKSGTKTFRDVKVDESNILYWQGLIVP 69
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 63.3 bits (147), Expect = 2e-10
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +2
Query: 125 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCACPSL 283
LI + PY+KG F+++I P YPF+PPK+ F T IYHPNID R +L
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTL 54
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 181 LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAEN---WKPATKTDQVIQALVALVN 351
+ R P + P+ F P G++CL + WKPA V+ ++ L+
Sbjct: 21 IPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILILMA 80
Query: 352 DPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 450
+P P+ PL AE++ EF ++ +F + A+E+T K
Sbjct: 81 EPNPDDPLMAEISNEFKYNKAQFLEKAKEWTLK 113
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 17 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 193
+A R LQ EL + + ++ F DESN W I P Y G F+ ++FP +
Sbjct: 1124 SAVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHD 1183
Query: 194 YPFKPPKISFKTKIYHPNIDE 256
YP+ PP F TK++HPNI E
Sbjct: 1184 YPYSPPTFRFLTKMWHPNIYE 1204
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/52 (23%), Positives = 27/52 (51%)
Frame = +1
Query: 280 ISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 435
+ +E W P ++ ++++L+N+P P + + F K R+ K++E
Sbjct: 1225 LPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRETKGKDSE 1276
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 52.0 bits (119), Expect = 5e-07
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 50 DIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFK 226
++++ ++ F D+ ++ W+ ++V P Y +G F+ + FP EYP +PP ++F
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFI 402
Query: 227 TKIYHPNIDERVRCACPSLVQKIG 298
+ I+HPN+ + C S++ + G
Sbjct: 403 SDIWHPNVHKNGE-VCISILHEPG 425
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 51.2 bits (117), Expect = 8e-07
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +1
Query: 175 D*LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAEN---WKPATKTDQVIQALVAL 345
D L + P + P+ F P G++CL + WKPA V+ ++ L
Sbjct: 33 DKLEASTPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISSVLSTILIL 92
Query: 346 VNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 450
+ +P P+ PL AE++ EF ++ +F + A+E+T K
Sbjct: 93 MAEPNPDDPLMAEISNEFKYNKAQFLEKAKEWTLK 127
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 98 ESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNID 253
E N+ ++ I P + Y G F+ + +YP P I+ KTKIYHPN+D
Sbjct: 33 EDNMEEFELQITPTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMD 83
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +R+Q+EL +I + ++ W I+ P Y G F ++I+FP++Y
Sbjct: 136 AAKRIQRELTEITLDPPPNC-SAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDY 194
Query: 197 PFKPPK 214
PFKPPK
Sbjct: 195 PFKPPK 200
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +R+Q+EL +I + ++ W I+ P Y G F ++I+FP++Y
Sbjct: 96 AAKRIQRELTEITLDPPPNC-SAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDY 154
Query: 197 PFKPPK 214
PFKPPK
Sbjct: 155 PFKPPK 160
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 116 WQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKI 217
W I+ P Y G F ++I+FP +YPFKPPK+
Sbjct: 54 WYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G++C+ + ++WKP QV+ + L+ P PE L E + L+ ++K A+
Sbjct: 160 GEICVNTLK-KDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKM 218
Query: 439 FTKKHSE 459
FT+ H++
Sbjct: 219 FTEIHAK 225
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 98 ESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCACP 277
E N+ ++ I P + Y G F+ + +YP PP IYHPN+D C
Sbjct: 33 EDNMEEFELQITPTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCL 91
Query: 278 SLV 286
SL+
Sbjct: 92 SLL 94
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = +1
Query: 331 ALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 456
++ +L+ DP P+ PL ++A + D+ K+ + A+E+TKK++
Sbjct: 4 SICSLLCDPNPDDPLVPDIARIYKTDKPKYNELAKEWTKKYA 45
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 35.9 bits (79), Expect = 0.033
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +RL +E ++R + Q E N+ W + P + + G + I P EY
Sbjct: 11 AVKRLMREAKELRNA--TELYHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEY 68
Query: 197 PFKPPKISFKT 229
P KPP I T
Sbjct: 69 PMKPPSIMLLT 79
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 33.9 bits (74), Expect = 0.13
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKIS 220
P PY G +++ ++ P +YPFK P I+
Sbjct: 57 PVGTPYEGGVWKVRVDLPEKYPFKSPSIA 85
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 95 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKT 229
DE+ + + L+ P + PY++G F +I FP YP PP + T
Sbjct: 1 DENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 95 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKT 229
D+ +I LI P + PY G F I P +YP +PP++ T
Sbjct: 6 DKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMT 51
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI---YHPNIDERVR-CACPSLVQ 289
P PY+ G F +I PA YP PP + + +PN+ E + C P L++
Sbjct: 643 PAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCITPFLLR 698
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPK 214
P P+ G + ++I P YPF PPK
Sbjct: 696 PPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 295 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEF 399
W PA + V+ ++ AL++ P P+ PL ++AE++
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQW 37
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 104 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTK-IYHPNIDERVRCACP 277
N+ W + P + + G + I P EYP KPP I T +Y+ + R+ P
Sbjct: 2 NLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTVWLYYTSTVSRI----P 57
Query: 278 SLVQKIGSLLPRLIKLS 328
V++I L+ +I+ S
Sbjct: 58 YAVERIYCLVSIIIQKS 74
>SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 14 MAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINF 184
MAA R ++K LN + D++ ESN L L P Y KGA + +N+
Sbjct: 253 MAARRAVKKALNTAHNEYVMGLLDVKEKESNELPDDWLTANICPIYKKGAKKDPVNY 309
>SB_5867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 397 FLKDRKKFTKNAEEFTKKHSEKRPTD*IHYKNFKF 501
FL+D KKF +N E K EK D + YK KF
Sbjct: 303 FLEDFKKFPRNDAEVLVKVIEKIHPDFVEYKGAKF 337
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 256 KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELA-EEFLKDRKKFTKNA 432
KG PII K TK + ++ L + PEH R+ A E+ + R++ + +A
Sbjct: 858 KGAKTRPIIKGLRHKRRTKELKGLRVLHRMRRRYGPEHRKRSIKANEQTITARQELSGSA 917
Query: 433 EEFTKKHSEKRPTD*IHYKNFK 498
TK+ RP+D +++++F+
Sbjct: 918 ---TKEWGHFRPSDTMYFRHFR 936
>SB_19511| Best HMM Match : Glycos_transf_1 (HMM E-Value=6.2e-23)
Length = 496
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 316 DQVIQALVALVN-DPEPEHPLRAELAEEFLKDRKKFTKN 429
D VI+ ++++ PE +HPL+ + EFLK + K +++
Sbjct: 299 DGVIKTIISIGQFRPEKDHPLQLKAFAEFLKGQPKSSRS 337
>SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01)
Length = 701
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +1
Query: 367 HPLRAELAEEFLKDR------KKFTKNAEEFTKKHSEKRPTD*IHYKNFK 498
+P ++A L+++ K +N E +K EK P D HY+ F+
Sbjct: 77 YPTNKDIANAILREKTRQCHSKADQENLEHLVRKWKEKSPDDFFHYRRFQ 126
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Frame = +2
Query: 23 TRRLQKELNDIRQSGLKSFRDIQVDESNILTWQ---------GLIVPDNPPYNKGAFRIE 175
++RL KE D+ + + F VD+ N+ W L+ D +
Sbjct: 736 SKRLMKEFQDVSRKTERIFSAELVDD-NLFEWNVKLHTIDGDSLLYRDMVETGSKFILLN 794
Query: 176 INFPAEYPFKPP 211
I FP +PF PP
Sbjct: 795 ITFPENFPFAPP 806
>SB_11166| Best HMM Match : CARD (HMM E-Value=0.001)
Length = 720
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 89 QVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKI 217
Q+ E N+L GL+ +NPPY + + IN +EY PKI
Sbjct: 528 QMGEDNVL---GLVDHENPPYTDVSTQWLINLMSEY-ISGPKI 566
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,205,216
Number of Sequences: 59808
Number of extensions: 398484
Number of successful extensions: 1020
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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