Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20821
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 125 3e-29
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 73 3e-13
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 73 3e-13
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 68 8e-12
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 66 2e-11
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 62 3e-10
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 62 3e-10
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 62 3e-10
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 62 4e-10
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 58 5e-09
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 57 1e-08
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 54 1e-07
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 48 5e-06
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 45 5e-05
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 42 4e-04
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 41 8e-04
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 41 0.001
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 40 0.001
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 40 0.001
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 38 0.005
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 38 0.007
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 36 0.038
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 33 0.27
AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical ... 32 0.47
AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical ... 32 0.47
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 30 1.4
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 29 4.4
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 125 bits (302), Expect = 3e-29
Identities = 48/88 (54%), Positives = 70/88 (79%)
Frame = +2
Query: 14 MAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAE 193
M+ATRRLQKEL D++ G+K++ +++ +E+N+L W L++PD PYNKGAF++ I FP +
Sbjct: 1 MSATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLIPDKEPYNKGAFKVGITFPVD 60
Query: 194 YPFKPPKISFKTKIYHPNIDERVRCACP 277
YPFKPPK++F+TKIYHPN+DE + P
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLP 88
Score = 120 bits (289), Expect = 1e-27
Identities = 53/91 (58%), Positives = 71/91 (78%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P +G+ CLPI++AENWKPATKT+QV+ AL++L+N+PEP HP+
Sbjct: 62 PFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHPI 121
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHSEKRP 468
RA++AEEF KD KKF K AEE T+KH+EKRP
Sbjct: 122 RADVAEEFQKDHKKFMKTAEEHTRKHAEKRP 152
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +R+QKEL D+ + V + ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F T+IYHPNI+
Sbjct: 61 PFKPPKVAFTTRIYHPNIN 79
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/87 (29%), Positives = 50/87 (57%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F + P G +CL I+ ++ W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR+++ + A E+T+K++
Sbjct: 120 VPEIARIYKTDRERYNQLAREWTQKYA 146
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +R+QKEL D+ + V + ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F T+IYHPNI+
Sbjct: 61 PFKPPKVAFTTRIYHPNIN 79
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/87 (29%), Positives = 50/87 (57%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F + P G +CL I+ ++ W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR+++ + A E+T+K++
Sbjct: 120 VPEIARIYKTDRERYNQLAREWTQKYA 146
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 67.7 bits (158), Expect = 8e-12
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 208
L+K+L D+R+ + F VD+++I W+ L++ P + Y G F+ ++FP +YP KP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 209 PKISFKTKIYHPNIDERVRCACPSLVQKIG 298
PK+ F ++I+HPNID+ C S++ G
Sbjct: 68 PKMKFISEIWHPNIDKEGN-VCISILHDPG 96
Score = 31.1 bits (67), Expect = 0.82
Identities = 11/58 (18%), Positives = 29/58 (50%)
Frame = +1
Query: 289 ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSEK 462
E W P + ++ ++++++ DP E P + A+ ++ +F K + ++ E+
Sbjct: 107 ERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQEE 164
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQ-GLIVPDNPPYNKGAFRIEINFPAEY 196
A R L EL +++ ++ F I V+E N+ W G+ P Y G F+ I FP+ Y
Sbjct: 11 ALRALTMELKNLQSQPVEGFT-IDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNY 69
Query: 197 PFKPPKISFKTKIYHPNIDE 256
P+ PP + F TK++HPN+ E
Sbjct: 70 PYSPPSMKFTTKVWHPNVYE 89
Score = 27.9 bits (59), Expect = 7.6
Identities = 8/42 (19%), Positives = 21/42 (50%)
Frame = +1
Query: 280 ISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLK 405
++ E W P ++ ++++L+N+P P + + + K
Sbjct: 110 LACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRK 151
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFP 187
T + RRL ++ +++ E NILTW+ +I P P+ G F++ + F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 188 AEYPFKPPKISFKTKIYHPNI 250
EYP KPP + F +K++HPN+
Sbjct: 61 EEYPNKPPTVKFISKMFHPNV 81
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/64 (20%), Positives = 35/64 (54%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ W P ++ ++ +L+++P P P + A+ + ++R+++ K ++
Sbjct: 85 GSICLDILQ-NRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
Query: 439 FTKK 450
++
Sbjct: 144 IVEQ 147
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFP 187
T + RRL ++ +++ E NILTW+ +I P P+ G F++ + F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 188 AEYPFKPPKISFKTKIYHPNI 250
EYP KPP + F +K++HPN+
Sbjct: 61 EEYPNKPPTVKFISKMFHPNV 81
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/64 (20%), Positives = 35/64 (54%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ W P ++ ++ +L+++P P P + A+ + ++R+++ K ++
Sbjct: 85 GSICLDILQ-NRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQ 143
Query: 439 FTKK 450
++
Sbjct: 144 IVEQ 147
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 95 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCA 271
DESN + +I PD+ P+ G F++E+ P EYP PK+ F TKIYHPNID+ R
Sbjct: 29 DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRIC 88
Query: 272 CPSLVQK 292
L K
Sbjct: 89 LDILKDK 95
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/93 (27%), Positives = 50/93 (53%)
Frame = +1
Query: 181 LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPE 360
L P+ P+ F K P G++CL I+ + W PA + V+ ++ AL++ P
Sbjct: 59 LPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPN 117
Query: 361 PEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 459
PE PL ++AE++ + + K A+++T +++
Sbjct: 118 PEDPLATDVAEQWKTNEAEAIKTAKQWTMNYAQ 150
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 62.1 bits (144), Expect = 4e-10
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVD--ESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 190
A RLQ+E ++ + S I ++ N+ +G I P + PY G F ++I P
Sbjct: 5 AFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPD 64
Query: 191 EYPFKPPKISFKTKIYHPNIDERVRCACPSLV--QKIGSLLPRLIKLS 328
+YPF PP + F TKI+HPN+ + C ++ Q SL R + LS
Sbjct: 65 QYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLS 112
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ + W + V+ ++ AL+ PEP+ P A +A+++++ F AE
Sbjct: 89 GVICLDILK-DQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEY 147
Query: 439 FTKKHSE 459
+T K ++
Sbjct: 148 WTTKFAK 154
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +RL E ++ + +DE N W+ LI P+ + G F I FP +Y
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 197 PFKPPKISFKTKIYHPNIDERVRCACPSLVQKIGSLLPRLIKLSKH*W 340
P PPK+ F I+HPNI R C S++ G P +LS W
Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGR-VCISILHAPGD-DPTGYELSNERW 110
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +1
Query: 280 ISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 450
+S E W P ++++ ++V+++ +P E P A+ + +DR +F K A+ +K
Sbjct: 105 LSNERWSPVQSIEKILLSVVSMLAEPNDESPANVSAAKMWREDRAQFEKIADSLVRK 161
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCACPSLVQKIGSLL 307
P + Y G +RI ++ P +YPFK P I F KI+HPNIDE C ++ + + L
Sbjct: 42 PKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTAL 99
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 56.0 bits (129), Expect = 3e-08
Identities = 20/63 (31%), Positives = 39/63 (61%)
Frame = +1
Query: 262 QVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEF 441
++C P++ ENWKP T + V+ L+ L+N+P+ P+ + A +++ ++ +F K + E
Sbjct: 96 ELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTEL 155
Query: 442 TKK 450
KK
Sbjct: 156 AKK 158
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +2
Query: 29 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP 208
R++KE+ D+ ++ + +D + E +Q I+ D Y F + ++ EYPFKP
Sbjct: 17 RIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIGDGVLYKNMIFTLTLDVNVEYPFKP 76
Query: 209 PKISFKTKIYHPNIDERVRC--ACPSLVQK 292
P + F +YHPN+D V C P L+Q+
Sbjct: 77 PYLKFCHNVYHPNVDP-VTCELCSPMLLQE 105
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 20/122 (16%)
Frame = +2
Query: 23 TRRLQKELN--DIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 193
TR+ ++ N DI ++G+ +++ E+N++ +G I P+ PY G F I+++ P
Sbjct: 24 TRKCKEVANASDITEAGIH----VEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEH 79
Query: 194 YPFKPPKIS---------------FKTKIYHPNIDERVRCACPSLVQK--IGSLLPRLIK 322
YPF+PPK++ F T+I+HPNI + C +++ SL R +
Sbjct: 80 YPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVL 139
Query: 323 LS 328
LS
Sbjct: 140 LS 141
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ + W + V+ +L A++ PEP P A +A++F+ + FT A
Sbjct: 118 GTICLDILK-DKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVY 176
Query: 439 FT 444
+T
Sbjct: 177 WT 178
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +2
Query: 23 TRRLQKELNDIRQS-GLKSFRDIQV--DESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 190
T+R+ KEL I + L + I V DE + + LI PD+ PY G F +I FP
Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPT 470
Query: 191 EYPFKPPKISFKT 229
YPF PPK +F T
Sbjct: 471 GYPFSPPKCAFLT 483
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 119 QGLIVP-DNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNI 250
QG+I + PY G F ++I YPFK P + F TKI+HP++
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSV 426
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 128 IVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE 256
+ P Y G FR +I P EY PP + TK++HPNI+E
Sbjct: 65 VTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINE 107
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +RL+K+ + + + + + E+NIL W+ +I+ PY G + ++ FP ++
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDF 67
Query: 197 PFKPPKISFKT 229
PFKPP I T
Sbjct: 68 PFKPPAILMLT 78
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDER 259
P P+ G + + +NF ++P PP FKT ++HPN+D R
Sbjct: 78 PRGSPWEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLR 118
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 17 AATRRLQKELNDIRQSGLKSFRDIQVDESNIL-TWQ-GLIVPDNPPYNKGAFRIEINFPA 190
AATRRL KEL ++ + SN L W+ G++ + Y F ++ F
Sbjct: 4 AATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGP 63
Query: 191 EYPFKPPKISF--KTKIYHPNI 250
+YPF P++ F +T HP+I
Sbjct: 64 QYPFNSPEVMFVGETIPAHPHI 85
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLP--P*H**KGQVCLPIISAENWKPATKTDQVIQALVALV-NDPEPE 366
P +PE F + +P P G +CL I+S ++W PA V ++++++ + E +
Sbjct: 66 PFNSPEVMFVGETIPAHPHIYSNGHICLSILS-DDWTPALSVQSVCLSILSMLSSSKEKK 124
Query: 367 HPL 375
HP+
Sbjct: 125 HPI 127
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 259 GQVCLPIISA-ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 435
G VCL ++ ++WKP+ Q++ + L+N P E P +AE + + ++R ++ K +
Sbjct: 90 GTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
Query: 436 EFTKKHS 456
+ K++
Sbjct: 150 KEAVKYA 156
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 NILTWQGLIVPDNPP-YNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNI 250
N+ W+ I + G +RI + F ++P PPK F+ ++HPN+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNV 86
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 259 GQVCLPIISA-ENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 435
G VCL ++ ++WKP+ Q++ + L+N P E P +AE + + ++R ++ K +
Sbjct: 90 GTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVK 149
Query: 436 EFTKKHS 456
+ K++
Sbjct: 150 KEAVKYA 156
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 NILTWQGLIVPDNPP-YNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNI 250
N+ W+ I + G +RI + F ++P PPK F+ ++HPN+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNV 86
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 17 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPD-NPPYNKGAFRIEINFPAE 193
A RRL KE ++RQ Q E N+ W I + G + I FPA+
Sbjct: 10 AGVRRLMKEAMELRQP--TEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPAD 67
Query: 194 YPFKPPKISFKT 229
YP KPP + T
Sbjct: 68 YPMKPPNLILLT 79
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYH 241
P + PY G F +++ FP YP P+I F+T I++
Sbjct: 38 PADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWN 73
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 86 IQVDESNILT-WQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE 256
++ D LT W I+ P PY + ++I YP +PP + F TK++ +++
Sbjct: 30 LEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQ 88
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 283 SAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTK 447
+A + K TK + ++ L+ L N+ +PE P +A +E ++ AEEFT+
Sbjct: 97 AASDDKNVTKCVRFLKTLINLSNNDDPEMPDKAARVKELIRGVIYLETTAEEFTR 151
>AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical
protein C02E11.1b protein.
Length = 1123
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 143 PPYNKGAFRIEINFPAEYPFKPPKISFK 226
P YNKG + ++++ PA Y F+P I K
Sbjct: 67 PVYNKGHYTLKVSAPAGYYFEPDSIEIK 94
>AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical
protein C02E11.1a protein.
Length = 1121
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 143 PPYNKGAFRIEINFPAEYPFKPPKISFK 226
P YNKG + ++++ PA Y F+P I K
Sbjct: 65 PVYNKGHYTLKVSAPAGYYFEPDSIEIK 92
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 101 SNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP--PKISF-KTKIYHPNIDERVRCA 271
+N W G+I + G FR I+ P E+P P++ F ++ ++HP I + +
Sbjct: 46 NNKFLWFGVIFVRKGIFGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKEL 105
Query: 272 C 274
C
Sbjct: 106 C 106
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 86 IQVDESNILTWQGLIV-PDNPPYNKGAFRIEINF-PAEYPFKPPKISFKTKIYHPNI 250
+++DE+ L + +I P Y G F +IN P + P++ F T I+HPN+
Sbjct: 54 MRIDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNL 110
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 346 VNDPEPEHPLRAELAEEF-LKDRKKFTKNAEEFTKKHSEK 462
+ND EPE P+R+ F L+D F K F KK SEK
Sbjct: 100 INDEEPEFPIRSTRLRSFDLRDGHIFDKG---FQKKPSEK 136
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 143 PPYNKGAFRIEINFPAEYPFKPPKISFKT 229
PPY + + + + P ++PF PP I+ KT
Sbjct: 46 PPYTE--YIVTVAIPPKFPFSPPAITCKT 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,469,423
Number of Sequences: 27780
Number of extensions: 317869
Number of successful extensions: 849
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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