Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20821
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 83 2e-16
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 77 9e-15
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 76 3e-14
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 76 3e-14
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 75 4e-14
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 75 6e-14
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 75 6e-14
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 75 6e-14
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 75 6e-14
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 74 8e-14
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 74 8e-14
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 73 1e-13
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 72 3e-13
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 72 3e-13
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 72 4e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 68 5e-12
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 66 3e-11
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 65 4e-11
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 64 1e-10
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 61 8e-10
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 59 3e-09
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 58 4e-09
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 58 4e-09
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 58 4e-09
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 58 4e-09
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 58 4e-09
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 58 4e-09
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 58 6e-09
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 58 6e-09
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 55 4e-08
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 55 5e-08
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 55 5e-08
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 54 7e-08
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 54 7e-08
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 54 9e-08
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 50 2e-06
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 46 2e-05
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 45 4e-05
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 44 1e-04
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 39 0.003
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 39 0.003
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 38 0.007
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 38 0.009
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 36 0.020
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 36 0.027
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 36 0.035
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 36 0.035
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 35 0.047
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 33 0.19
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 33 0.19
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 31 0.57
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 31 0.76
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 31 0.76
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 31 1.0
At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protei... 31 1.0
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 30 1.3
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 29 3.1
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 29 3.1
At5g05920.1 68418.m00654 deoxyhypusine synthase almost identical... 28 5.3
At4g21770.1 68417.m03150 pseudouridine synthase family protein c... 28 5.3
At5g08420.1 68418.m00992 expressed protein 28 7.1
At3g62360.1 68416.m07005 expressed protein 27 9.3
At1g75000.1 68414.m08707 GNS1/SUR4 membrane family protein conta... 27 9.3
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ +EL D+++ + V E +I WQ I+ P + PY+ G F + I+F ++Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 197 PFKPPKISFKTKIYHPNIDER 259
PFKPPK++FKTK+YHPNID +
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSK 82
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/91 (34%), Positives = 52/91 (57%)
Frame = +1
Query: 184 SSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEP 363
SS P + P+ F+ K P KG +CL I+ E W PA T +V+ ++ +L+ DP P
Sbjct: 58 SSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILK-EQWSPAPTTSKVLLSICSLLTDPNP 116
Query: 364 EHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 456
PL E+A + D+ K+ A+++T+K++
Sbjct: 117 NDPLVPEIAHLYKVDKSKYESTAQKWTQKYA 147
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ + V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK+SFKTK+YHPNI+
Sbjct: 61 PFKPPKVSFKTKVYHPNIN 79
Score = 57.6 bits (133), Expect = 8e-09
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRSKYESTARSWTQKYA 146
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPNI+
Sbjct: 91 PFKPPKVAFRTKVFHPNIN 109
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 91 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 149
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + D+ K+ A +T+K++
Sbjct: 150 VPEIAHMYKTDKNKYESTARTWTQKYA 176
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPNI+
Sbjct: 61 PFKPPKVAFRTKVFHPNIN 79
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARTWTQKYA 146
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S V E ++ WQ I+ P + PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPN++
Sbjct: 61 PFKPPKVAFRTKVFHPNVN 79
Score = 57.6 bits (133), Expect = 8e-09
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYESTARSWTQKYA 146
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPNI+
Sbjct: 61 PFKPPKVAFRTKVFHPNIN 79
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPNI+
Sbjct: 61 PFKPPKVAFRTKVFHPNIN 79
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYEATARNWTQKYA 146
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S V E ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPNI+
Sbjct: 61 PFKPPKVAFRTKVFHPNIN 79
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDRAKYEATARNWTQKYA 146
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
ATRR+ KEL ++++ S E ++ WQ I+ P+ PY+ G F + I+FP +Y
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK+ F+TK++HPNI+
Sbjct: 61 PFKPPKVVFRTKVFHPNIN 79
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/87 (29%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ + W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILK-DQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHIYKTDKTKYEAMARSWTQKYA 146
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPNI+
Sbjct: 61 PFKPPKVAFRTKVFHPNIN 79
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARSWTQKYA 146
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S V E ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPNI+
Sbjct: 61 PFKPPKVAFRTKVFHPNIN 79
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + D+ K+ A +T+K++
Sbjct: 120 VPEIAHMYKTDKNKYESTARSWTQKYA 146
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S ++ WQ I+ P PY+ G F + I+FP +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK++HPNI+
Sbjct: 62 PFKPPKVAFRTKVFHPNIN 80
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPL 120
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR K+ A +T+K++
Sbjct: 121 VPEIAHMYKTDRAKYEATARNWTQKYA 147
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S + ++ WQ I+ P + P+ G F + I+FP +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK+YHPNI+
Sbjct: 61 PFKPPKVAFRTKVYHPNIN 79
Score = 57.6 bits (133), Expect = 8e-09
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILK-EQWSPALTVSKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR K+ A+ +T+K++
Sbjct: 120 VPEIAHIYKTDRVKYESTAQSWTQKYA 146
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A++R+ KEL D+++ S + ++ WQ I+ P + P+ G F + I+FP +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 197 PFKPPKISFKTKIYHPNID 253
PFKPPK++F+TK+YHPNI+
Sbjct: 61 PFKPPKVAFRTKVYHPNIN 79
Score = 57.6 bits (133), Expect = 8e-09
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 375
P + P+ F+ K P G +CL I+ E W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILK-EQWSPALTVSKVLLSICSLLTDPNPDDPL 119
Query: 376 RAELAEEFLKDRKKFTKNAEEFTKKHS 456
E+A + DR K+ A+ +T+K++
Sbjct: 120 VPEIAHIYKTDRVKYESTAQSWTQKYA 146
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 71.7 bits (168), Expect = 4e-13
Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 KSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPN 247
+S I + +NI W +I PD PY G F + I FP +YPFKPPK +FKT IYHPN
Sbjct: 24 ESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPN 83
Query: 248 IDE 256
I++
Sbjct: 84 IND 86
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/67 (31%), Positives = 41/67 (61%)
Frame = +1
Query: 256 KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 435
+G +C+ I+ + W PA ++V+ +++ L+ P P+ PL E+ + F +R +F + A
Sbjct: 87 EGSICMNILK-DKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAR 145
Query: 436 EFTKKHS 456
EFT +H+
Sbjct: 146 EFTARHA 152
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +2
Query: 17 AATRRLQKELNDIRQSGLK-SFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 190
+A RL KE + + LK R NI W+ + P PY KG F + ++ P
Sbjct: 29 SAENRLWKEFQE-KDDVLKIHVRSWLPSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPP 87
Query: 191 EYPFKPPKISFKTKIYHPNIDE 256
+YP++PPKI+FKTKI+HPNI E
Sbjct: 88 KYPYEPPKITFKTKIFHPNISE 109
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +2
Query: 29 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFK 205
R+QKEL D ++ S + N+ G I P PY G F+I+I P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 206 PPKISFKTKIYHPNIDERVRCACPSLVQ 289
PPK+ F TK++HPNI + C +++
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILK 93
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/68 (30%), Positives = 40/68 (58%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ + W PA + ++ AL++ PEP+ P A +AE+++K+ + F A
Sbjct: 85 GAICLDILK-DQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARY 143
Query: 439 FTKKHSEK 462
+T+ ++K
Sbjct: 144 WTETFAKK 151
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Frame = +2
Query: 17 AATRRLQKELNDIRQSGLKSFRDIQV--DESNILTWQGLIV-PDNPPYNKGAFRIEINFP 187
A+ RL KE ++++ + DIQ+ D++NI W LI P PY G F++ + P
Sbjct: 3 ASRARLFKEYKEVQREKVAD-PDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
Query: 188 AEYPFKPPKISFKTKIYHPNIDERVRCACPSLVQKIGS 301
YP +PP++ F TKI+HPN+ + C +++ S
Sbjct: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWS 99
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 196 PIQTPEN*FQNKDLPP*-H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHP 372
P+Q P+ F K P H G++CL I+ W PA V +A++AL+ PEP+ P
Sbjct: 65 PLQPPQVRFLTKIFHPNVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPDSP 123
Query: 373 LRAELAEEFLK-DRKKFTKNAEEFTK 447
L + D + F A+ +T+
Sbjct: 124 LNCDSGNLLRSGDVRGFNSMAQMYTR 149
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNID 253
N+ W I+ P PY G F ++I FP++YPFKPPK+ FKT+IYH N+D
Sbjct: 64 NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVD 114
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +1
Query: 280 ISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 459
I ++W PA +V+QA+ ++ PEP P +A +L DR+K + A+E+T + ++
Sbjct: 123 ILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFP 187
+ + +RLQ EL + G +E NI W+G I +G +R+ ++F
Sbjct: 33 SQSVLKRLQSELMGLMMGGGPGISAFP-EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFS 91
Query: 188 AEYPFKPPKISFKTKIYHPNID 253
+YPFKPPK+ F+T +HPN+D
Sbjct: 92 NDYPFKPPKVKFETCCFHPNVD 113
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A+ LQK+L D+ + + F VDE N+ W I+ P + Y G F ++FP Y
Sbjct: 6 ASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENY 65
Query: 197 PFKPPKISFKTKIYHPNI 250
P PP ++F ++++HPN+
Sbjct: 66 PVSPPTVTFTSEMWHPNV 83
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 197 PFKPPKISFKTKIYHPNI 250
P KPP + F ++++HPNI
Sbjct: 64 PNKPPTVRFVSRMFHPNI 81
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ + W P ++ ++ +L+ DP P P +E A F + ++++ + E
Sbjct: 85 GSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVRE 143
Query: 439 FTKK 450
++
Sbjct: 144 VVEQ 147
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 98 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCAC 274
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ R
Sbjct: 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 275 PSLVQK 292
L K
Sbjct: 91 DILKDK 96
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/92 (26%), Positives = 47/92 (51%)
Frame = +1
Query: 181 LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPE 360
L P+ P+ F K P G++CL I+ + W PA + V+ ++ AL++ P
Sbjct: 60 LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPN 118
Query: 361 PEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 456
P+ PL +A+ + + + A+E+T+ ++
Sbjct: 119 PDDPLSENIAKHWKSNEAEAVDTAKEWTRLYA 150
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 98 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCAC 274
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ R
Sbjct: 31 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 275 PSLVQK 292
L K
Sbjct: 91 DILKDK 96
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 58.4 bits (135), Expect = 4e-09
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 98 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCAC 274
E N+ + +I+ P PY G F++E+ P EYP PK+ F TKIYHPNID+ R
Sbjct: 31 EENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICL 90
Query: 275 PSLVQK 292
L K
Sbjct: 91 DILKDK 96
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/92 (26%), Positives = 48/92 (52%)
Frame = +1
Query: 181 LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPE 360
L P+ P+ F K P G++CL I+ + W PA + V+ ++ AL++ P
Sbjct: 60 LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPN 118
Query: 361 PEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 456
P+ PL +A+ + + + + A+E+T+ ++
Sbjct: 119 PDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 150
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 197 PFKPPKISFKTKIYHPNI 250
P KPP + F ++++HPNI
Sbjct: 64 PNKPPTVRFVSRMFHPNI 81
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ + W P ++ ++ +L+ DP P P +E A + + ++++ + +
Sbjct: 85 GSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRD 143
Query: 439 FTKK 450
++
Sbjct: 144 VVEQ 147
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +RL ++ ++Q D +NI+ W +I PD+ P++ G F++ + F +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 197 PFKPPKISFKTKIYHPNI 250
P KPP + F ++++HPNI
Sbjct: 64 PNKPPTVRFVSRMFHPNI 81
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ + W P ++ ++ +L+ DP P P +E A + + ++++ + +
Sbjct: 85 GSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRD 143
Query: 439 FTKK 450
++
Sbjct: 144 VVEQ 147
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 32 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 208
LQK+L D+ + + F VDE NI W I+ P + Y G F ++FP YP P
Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSP 68
Query: 209 PKISFKTKIYHPNI 250
P + F + I+HPN+
Sbjct: 69 PTVRFTSDIWHPNV 82
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +2
Query: 125 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCACPSLVQK 292
++ P PY G F++E+ P EYP PK+ F TKIYHPNID+ R L K
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 63
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/92 (26%), Positives = 48/92 (52%)
Frame = +1
Query: 181 LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPE 360
L P+ P+ F K P G++CL I+ + W PA + V+ ++ AL++ P
Sbjct: 27 LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPN 85
Query: 361 PEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 456
P+ PL +A+ + + + + A+E+T+ ++
Sbjct: 86 PDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 117
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVR 265
P++ Y G F ++I P YPF+PP +SF T IYHPNID R
Sbjct: 54 PEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGR 97
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +1
Query: 181 LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAEN---WKPATKTDQVIQALVALVN 351
+ R P Q P F P G++CL I++ W+P+ V+ ++ L++
Sbjct: 70 IPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLS 129
Query: 352 DPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 459
+P P+ L E++ E+ +R+ F A E T+K+++
Sbjct: 130 EPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAK 165
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 54.8 bits (126), Expect = 5e-08
Identities = 20/52 (38%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +2
Query: 98 ESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNI 250
++NI+ W LI P++ P++ G F++ ++F +YP KPP + F ++++HPNI
Sbjct: 30 DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNI 81
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEE 438
G +CL I+ + W P V+ ++ +L+ DP P+ P AE A F ++++++ + E
Sbjct: 85 GSICLDILQNQ-WSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIE 143
Query: 439 FTKK 450
++
Sbjct: 144 IVEQ 147
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 54.8 bits (126), Expect = 5e-08
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +2
Query: 26 RRLQKELNDIRQS---GLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFPAE 193
+RLQ EL + G+ +F + E NI W+G I +G +R+ + F +
Sbjct: 39 KRLQSELMGLMMGADPGISAFPE----EDNIFCWKGTITGSKDTVFEGTEYRLSLTFSND 94
Query: 194 YPFKPPKISFKTKIYHPNID 253
YPFK PK+ F+T +HPN+D
Sbjct: 95 YPFKSPKVKFETCCFHPNVD 114
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCACPSLVQKIGSLLPR 313
P + Y G ++I++ P YP+K P + F KIYHPN+DE C ++ + S +
Sbjct: 39 PTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFD 98
Query: 314 LIKL 325
LI +
Sbjct: 99 LINV 102
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 181 LSSRIPIQTPEN*FQNKDLPP*-H**KGQVCLPIISAENWKPATKTDQVIQA-LVALVND 354
L P ++P F NK P G VCL +I+ + W P V ++ L L+
Sbjct: 55 LPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVIN-QTWSPMFDLINVFESFLPQLLLY 113
Query: 355 PEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 459
P P P E A ++DR + +E+ +K+++
Sbjct: 114 PNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYAK 148
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCACPSLVQKIGSLLPR 313
P + Y G ++I + P YP+K P + F TKIYHPN+DE C ++ + S +
Sbjct: 39 PKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFD 98
Query: 314 LIKL 325
L+ +
Sbjct: 99 LVNV 102
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 435
G VCL +I+ + W P V + L L+ P P PL E A ++DR + + +
Sbjct: 82 GSVCLDVIN-QTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVK 140
Query: 436 EFTKKHSEKR 465
E+ +K+++ R
Sbjct: 141 EYCEKYAKPR 150
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +2
Query: 134 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDERVRCACPSLVQKIGSLLPR 313
P + Y G ++I + P YP+K P + F TKIYHPN+DE C ++ + S +
Sbjct: 39 PKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFD 98
Query: 314 LIKL 325
L+ +
Sbjct: 99 LVNV 102
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 259 GQVCLPIISAENWKPATKTDQVIQA-LVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 435
G VCL +I+ + W P V + L L+ P P PL E A ++DR + + +
Sbjct: 82 GSVCLDVIN-QTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140
Query: 436 EFTKKHSE 459
E+ +K+++
Sbjct: 141 EYCEKYAK 148
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +2
Query: 26 RRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFK 205
++L KEL + +S + + DE + P PY G FR+++ ++P
Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHS 72
Query: 206 PPKISFKTKIYHPNI 250
PPK F TKI+HPN+
Sbjct: 73 PPKGYFMTKIFHPNV 87
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 AATRRLQKELNDIRQSGLKSFR-DIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAE 193
A RL K+++++ KS + +++++ ++ I PD Y G F
Sbjct: 31 AGELRLHKDISELNLP--KSCKISFPNGKNDLMNFEVTIKPDEGYYLSGNFVFSFQVSNM 88
Query: 194 YPFKPPKISFKTKIYHPNID 253
YP + PK+ KTK+YHPNID
Sbjct: 89 YPHEAPKVKCKTKVYHPNID 108
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = +1
Query: 181 LSSRIPIQTPEN*FQNKDLPP*H**KGQVCLPIISAENWKPATKTDQVIQALVALVNDPE 360
+S+ P + P+ + K P +G VCL I+ E+WKP + VI L L +P
Sbjct: 85 VSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILR-EDWKPVLNINTVIYGLFHLFTEPN 143
Query: 361 PEHPLRAELAEEFLKDRKKFTKN 429
E PL E A + K F N
Sbjct: 144 YEDPLNHEAAAVLRDNPKTFEYN 166
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 68 LKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHP 244
L +++ D NI W I+ P + Y G F + FP YP PP + F + ++HP
Sbjct: 53 LSPYQNQSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHP 112
Query: 245 NIDERVRCACPSLVQKIG 298
N+ R C S++ G
Sbjct: 113 NVYSDGR-VCISILHPPG 129
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 20 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 196
A +R+ +E+ +++ + F + ++E NI WQ I P + + G + I PA+Y
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 197 PFKPPKISFKT 229
PFKPP T
Sbjct: 71 PFKPPSFMLLT 81
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 17 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 193
A +RLQKE + + + S + ++IL W ++ + P+ G + +I FP E
Sbjct: 5 ACIKRLQKEYRALCKEPV-SHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 194 YPFKPPKISFKT 229
YP+KPP I+ T
Sbjct: 64 YPYKPPGITMTT 75
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 17 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 193
A +RLQKE + + + S + ++IL W ++ + P+ G + +I FP E
Sbjct: 5 ACIKRLQKEYRALCKEPV-SHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 194 YPFKPPKISFKT 229
YP+KPP I+ T
Sbjct: 64 YPYKPPGITMTT 75
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 NILTWQGLIVPD-NPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNI 250
N++ W I + G F + ++F +YP KPPK F +HPN+
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNV 87
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 259 GQVCLPIISAE-NWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 435
G VCL I++ + W+PA Q++ + L++ P P P + + F +D ++ K +
Sbjct: 91 GTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQDPVEYKKRVK 150
Query: 436 EFTKKH 453
+K++
Sbjct: 151 LQSKQY 156
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 65 GLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYH 241
G S+ D+ + +W G I+ P N Y F++++ EYP PP + F+T+I
Sbjct: 30 GTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINM 89
Query: 242 PNIDERVRCACPSL 283
++ PSL
Sbjct: 90 ACVNPETGVVEPSL 103
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 2 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQ-GLIVPDNPPYNKGAFRIEI 178
K + AT RLQKEL + + + F+ D N+ W +I Y +++++
Sbjct: 10 KTLSKIATNRLQKELVEWQMNPPTGFKHKVTD--NLQRWIIEVIGAPGTLYANDTYQLQV 67
Query: 179 NFPAEYPFKPPKISF-KTKIYHPNI 250
+FP YP + P++ F HP+I
Sbjct: 68 DFPEHYPMESPQVIFLHPAPLHPHI 92
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 35.9 bits (79), Expect = 0.027
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +2
Query: 11 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNI-LTWQGLIVPDNPPYNKGAFRIEINFP 187
T + +++Q+E +++ ++ L + ++V E + L L+ PY+ G F +I P
Sbjct: 660 TKSWVKKVQQEWSNL-EANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLP 718
Query: 188 AEYPFKPPKISFKT--KIYHPNIDERVRCACPSLV 286
+YP +PP + + + +PN+ E R C SL+
Sbjct: 719 PQYPHEPPMVHYHSGGMRLNPNLYESGR-VCLSLL 752
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 32 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 208
+QKE I L ++ ES I + +I+ + PY+ G F +I FP YP P
Sbjct: 610 IQKEWK-ILDKNLPETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVP 668
Query: 209 PKISF 223
PK+ +
Sbjct: 669 PKVHY 673
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 53 IRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISF 223
I ++ L ++ ES + + +I+ + PY+ G F +I FP YP PP + +
Sbjct: 282 ILENDLPEAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHY 339
Score = 31.9 bits (69), Expect = 0.43
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 125 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISF 223
+I + PY+ G F +I FP YP PP + +
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYY 985
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 35.5 bits (78), Expect = 0.035
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIE 175
K + A RLQKEL++ + + FR D N+ W + V P Y ++++
Sbjct: 10 KALSKIACNRLQKELSEWQLNPPTGFRHKVTD--NLQKWT-IDVTGAPGTLYANETYQLQ 66
Query: 176 INFPAEYPFKPPKISFKTKI-YHPNI 250
+ FP YP + P++ F + HP+I
Sbjct: 67 VEFPEHYPMEAPQVVFVSPAPSHPHI 92
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 35.1 bits (77), Expect = 0.047
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 2 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP---YNKGAFRI 172
K T AT RLQKE + + + F+ D N+ W +I P Y +++
Sbjct: 10 KGLTKIATNRLQKEFMEWQTNPPSGFKHRVSD--NLQRW--IIEVHGVPGTLYANETYQL 65
Query: 173 EINFPAEYPFKPPKISFKTKI-YHPNI 250
++ FP YP + P++ F+ HP+I
Sbjct: 66 QVEFPEHYPMEAPQVIFQHPAPLHPHI 92
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 KFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIE 175
K + A RLQKEL++ + + F+ D N+ W + V P Y + ++
Sbjct: 10 KALSKIACNRLQKELSEWQVNPPTGFKHRVTD--NLQKWV-IEVTGAPGTLYANETYNLQ 66
Query: 176 INFPAEYPFKPPKISFKTKI-YHPNI 250
+ FP YP + P++ F HP+I
Sbjct: 67 VEFPQHYPMEAPQVIFVPPAPLHPHI 92
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 65 GLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 235
G S+ D+ + +W G I+ P N Y F++++ +YP PP + F+++I
Sbjct: 30 GTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRI 87
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 95 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 235
D+ + +W G I+ P N + +++++ +YP KPP + F ++I
Sbjct: 41 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 88
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 95 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI 235
D+ + +W G I+ P N + +++++ +YP KPP + F +++
Sbjct: 42 DDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 89
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 26 RRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPF 202
+R+Q E I + L ++ ES + + +I+ PY+ G F +I FP YP
Sbjct: 335 KRIQDEWR-ILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPS 393
Query: 203 KPPKISF 223
PP + +
Sbjct: 394 TPPIVHY 400
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 95 DESNILTWQGLIV-PDNPPYNKGA-FRIEINFPAEYPFKPPKISFKTKI 235
D+ + +W G I+ P N ++G +++++ +YP KPP + F ++I
Sbjct: 41 DDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRI 89
>At1g71720.1 68414.m08290 S1 RNA-binding domain-containing protein
contains Pfam domain, PF00575: S1 RNA binding domain
Length = 487
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 310 KTDQVIQALVALVNDPEPEHPLRAELAEE---FLKDRKKFTKNAEEFTKKHSEKRP 468
+ D+ ++ LV P+ A+L E F+ DR+K AEE KK+ EK P
Sbjct: 395 QVDESVKVLVVKSLFPDKISLSIADLESEPGLFISDREKVFTEAEEMAKKYREKMP 450
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/49 (26%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 95 DESNILTWQGLIV-PDNPPYNKGA-FRIEINFPAEYPFKPPKISFKTKI 235
D+ + +W G I+ P N ++G +++++ +YP KPP + F +++
Sbjct: 42 DDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRV 90
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +1
Query: 274 PIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 453
P AEN P + D L LV E E +LAEE + KK ++A KK
Sbjct: 429 PADVAENLMPKSDEDDADICLTRLVKSLEEEKEKAKKLAEE--EKMKKAARDARRIKKKA 486
Query: 454 SEK 462
E+
Sbjct: 487 EEE 489
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 146 PYNKGAFRIEINFPAEYPFKPPKISFKTKIY--HPNIDERVRCACPSLV 286
PY G F + + P++YP PP + + + +PN+ E + C SL+
Sbjct: 893 PYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGK-VCLSLL 940
>At5g05920.1 68418.m00654 deoxyhypusine synthase almost identical to
deoxyhypusine synthase GI:15431345 from [Arabidopsis
thaliana]
Length = 368
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 132 FQTTHLTTKVLSALRLTFQQNTHSNPRKLVSKQRFTTLTLMKGSGVPAHH*C 287
F+T+ L V+ +R + H+NP+K T ++ G G+P HH C
Sbjct: 249 FRTSGLIIDVVQDIRAMNGEAVHANPKK--------TGMIILGGGLPKHHIC 292
>At4g21770.1 68417.m03150 pseudouridine synthase family protein
contains Pfam profile PF00849: RNA pseudouridylate
synthase
Length = 472
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +3
Query: 156 KVLSALRLT---FQQNTHSNPRKLVSKQRFTTLTLMK 257
+ L++ R+T F+ N HS PR + S +RFT L+L+K
Sbjct: 21 RTLASTRVTTPLFRSNKHS-PRFISSPKRFTCLSLLK 56
>At5g08420.1 68418.m00992 expressed protein
Length = 391
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 355 PEPEHP----LRAELAEEFLKDRKKFTKNAEEFTKKHSEK 462
P P+ P ++ E E F+ D+KK K +E +K SEK
Sbjct: 268 PPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEK 307
>At3g62360.1 68416.m07005 expressed protein
Length = 1227
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 143 PPYNKGAFRIEINFPAEYPFKPPKIS 220
P Y+KG+F ++IN P + + P K++
Sbjct: 84 PVYDKGSFILKINGPDGWSWNPDKVT 109
>At1g75000.1 68414.m08707 GNS1/SUR4 membrane family protein contains
Pfam profile PF01151: GNS1/SUR4 family
Length = 281
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 453 VFFGKFFCILCKFLPIFEKFFG*FRPQWMLWFWIIHKS 340
VFF + L +FL +F FF R + + +F +I++S
Sbjct: 126 VFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQS 163
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,322,755
Number of Sequences: 28952
Number of extensions: 285915
Number of successful extensions: 785
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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