Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20819
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    29   0.047
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 28.7 bits (61), Expect = 0.047
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
 Frame = +1

Query: 145 ISIHGRESNNL--ARILQTYYET------SHHPSLIWACVPMLC-REHIENALKMMKKRK 297
           I ++ ++++NL  +++L TY +       SH P   W C+   C R HI+ A+ ++    
Sbjct: 22  IYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTWQCINQRCERRHIKGAIPVVSLST 81

Query: 298 LGMSPGT 318
             M  G+
Sbjct: 82  CSMLCGS 88


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -2

Query: 540 ASCSTMLTTSCGEPETKQDILFCY 469
           A C  +L     + E++Q +  CY
Sbjct: 287 AMCGLVLICDSAKSESQQTVFLCY 310


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 415 LFTTSCDGRSADNSKTTPTRLSQSRRS 335
           LFT + DG++   + T  T++   R+S
Sbjct: 233 LFTYTDDGKNQQRTGTELTKMRPKRQS 259


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 460 YFIITKKDILFCLGLTTT 513
           YF I  K +L  LG+T T
Sbjct: 358 YFTIETKTVLDVLGVTVT 375


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 460 YFIITKKDILFCLGLTTT 513
           YF I  K +L  LG+T T
Sbjct: 284 YFTIETKTVLDVLGVTVT 301


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 549 ITCASCSTMLTTSCGEPETKQDIL 478
           +TC  C  +L  +CG   T + +L
Sbjct: 501 MTCLFCINVLAEACGSDITTRLLL 524


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,109
Number of Sequences: 336
Number of extensions: 4214
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)