Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20819
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p pro...    79   6e-15
AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen pr...    79   6e-15
AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative pro...    79   6e-15
AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB...    79   6e-15
AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA...    79   6e-15
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent...    32   0.85 
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P...    32   0.85 
AY095533-1|AAM12264.1|  489|Drosophila melanogaster SD03002p pro...    29   7.9  
AY069500-1|AAL39645.1|  862|Drosophila melanogaster LD22456p pro...    29   7.9  
AE014298-578|AAF45907.1|  862|Drosophila melanogaster CG2938-PB ...    29   7.9  

>AY122153-1|AAM52665.1|  610|Drosophila melanogaster LD07634p
           protein.
          Length = 610

 Score = 79.0 bits (186), Expect = 6e-15
 Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +3

Query: 264 RECTEDDEEEKAWNEPWYWWSKFHERLDWDKRVGVVLELS-ADLPSQEVVKRWLGEPVKA 440
           ++ T ++  E   N+PW WW+          +V VV+EL+ AD PS+E V+RWLGEP++A
Sbjct: 151 KDATAEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETVRRWLGEPIEA 210

Query: 441 IIVPTSIFHNNKKGYPVLSR 500
           II+P+S+F  N+  Y VL +
Sbjct: 211 IIIPSSLFVRNRSNYCVLKK 230



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 4   DWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLA 180
           DW S+++  +S  +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E+ NLA
Sbjct: 59  DWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLA 117

Query: 181 RIL 189
            I+
Sbjct: 118 SIV 120


>AJ002740-1|CAA05712.1|  609|Drosophila melanogaster capsuleen
           protein.
          Length = 609

 Score = 79.0 bits (186), Expect = 6e-15
 Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +3

Query: 264 RECTEDDEEEKAWNEPWYWWSKFHERLDWDKRVGVVLELS-ADLPSQEVVKRWLGEPVKA 440
           ++ T ++  E   N+PW WW+          +V VV+EL+ AD PS+E V+RWLGEP++A
Sbjct: 151 KDATAEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETVRRWLGEPIEA 210

Query: 441 IIVPTSIFHNNKKGYPVLSR 500
           II+P+S+F  N+  Y VL +
Sbjct: 211 IIIPSSLFVRNRSNYCVLKK 230



 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +1

Query: 4   DWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLA 180
           DW S+++  +S  +NVDSP+A +R+  ++    ++++   L  V  +M+ + G E+ NLA
Sbjct: 59  DWNSKVIFTMSD-VNVDSPNAKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLA 117

Query: 181 RIL 189
            I+
Sbjct: 118 SIV 120


>AF167574-1|AAF04504.1|  610|Drosophila melanogaster putative
           protein methyltransferaseJBP1 protein.
          Length = 610

 Score = 79.0 bits (186), Expect = 6e-15
 Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +3

Query: 264 RECTEDDEEEKAWNEPWYWWSKFHERLDWDKRVGVVLELS-ADLPSQEVVKRWLGEPVKA 440
           ++ T ++  E   N+PW WW+          +V VV+EL+ AD PS+E V+RWLGEP++A
Sbjct: 151 KDATAEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETVRRWLGEPIEA 210

Query: 441 IIVPTSIFHNNKKGYPVLSR 500
           II+P+S+F  N+  Y VL +
Sbjct: 211 IIIPSSLFVRNRSNYCVLKK 230



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 4   DWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLA 180
           DW S+++  +S  +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E+ NLA
Sbjct: 59  DWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLA 117

Query: 181 RIL 189
            I+
Sbjct: 118 SIV 120


>AE013599-2233|AAF58030.1|  605|Drosophila melanogaster CG3730-PB,
           isoform B protein.
          Length = 605

 Score = 79.0 bits (186), Expect = 6e-15
 Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +3

Query: 264 RECTEDDEEEKAWNEPWYWWSKFHERLDWDKRVGVVLELS-ADLPSQEVVKRWLGEPVKA 440
           ++ T ++  E   N+PW WW+          +V VV+EL+ AD PS+E V+RWLGEP++A
Sbjct: 146 KDATAEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETVRRWLGEPIEA 205

Query: 441 IIVPTSIFHNNKKGYPVLSR 500
           II+P+S+F  N+  Y VL +
Sbjct: 206 IIIPSSLFVRNRSNYCVLKK 225



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 4   DWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLA 180
           DW S+++  +S  +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E+ NLA
Sbjct: 59  DWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLA 117

Query: 181 RIL 189
            I+
Sbjct: 118 SIV 120


>AE013599-2232|AAM68510.1|  610|Drosophila melanogaster CG3730-PA,
           isoform A protein.
          Length = 610

 Score = 79.0 bits (186), Expect = 6e-15
 Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
 Frame = +3

Query: 264 RECTEDDEEEKAWNEPWYWWSKFHERLDWDKRVGVVLELS-ADLPSQEVVKRWLGEPVKA 440
           ++ T ++  E   N+PW WW+          +V VV+EL+ AD PS+E V+RWLGEP++A
Sbjct: 151 KDATAEEVAEAESNDPWNWWNNLRMVTKHSTKVKVVIELNDADRPSKETVRRWLGEPIEA 210

Query: 441 IIVPTSIFHNNKKGYPVLSR 500
           II+P+S+F  N+  Y VL +
Sbjct: 211 IIIPSSLFVRNRSNYCVLKK 230



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 4   DWTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGL-GVPAIMISIHGRESNNLA 180
           DW S+++  +S  +NVDSP+  +R+  ++    ++++   L  V  +M+ + G E+ NLA
Sbjct: 59  DWNSKVIFTMSD-VNVDSPNDKLREHAKEVFMRDVAWAEHLQNVGNLMVRLRGPENENLA 117

Query: 181 RIL 189
            I+
Sbjct: 118 SIV 120


>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
           centrosomal protein protein.
          Length = 2726

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 70  VRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNL 177
           V+++ +DYLN++++ CR LG   + I+    ES  L
Sbjct: 665 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 700


>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
           isoform B protein.
          Length = 2897

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 70  VRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNL 177
           V+++ +DYLN++++ CR LG   + I+    ES  L
Sbjct: 836 VQRKFDDYLNQQITLCRDLGAQELKIARDQWESEKL 871


>AY095533-1|AAM12264.1|  489|Drosophila melanogaster SD03002p
           protein.
          Length = 489

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 684 GVCR*SSHPLA*LSIGSFAGFGLLLHTRCRYCTKNSMLDLR 562
           G C  SS P   L I ++A FG+ +   C  C +  +L LR
Sbjct: 356 GTCCSSSEPYTTLQIVAYALFGVCMALVCGMCLRRWVLHLR 396


>AY069500-1|AAL39645.1|  862|Drosophila melanogaster LD22456p
           protein.
          Length = 862

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 684 GVCR*SSHPLA*LSIGSFAGFGLLLHTRCRYCTKNSMLDLR 562
           G C  SS P   L I ++A FG+ +   C  C +  +L LR
Sbjct: 356 GTCCSSSEPYTTLQIVAYALFGVCMALVCGMCLRRWVLHLR 396


>AE014298-578|AAF45907.1|  862|Drosophila melanogaster CG2938-PB
           protein.
          Length = 862

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 684 GVCR*SSHPLA*LSIGSFAGFGLLLHTRCRYCTKNSMLDLR 562
           G C  SS P   L I ++A FG+ +   C  C +  +L LR
Sbjct: 356 GTCCSSSEPYTTLQIVAYALFGVCMALVCGMCLRRWVLHLR 396


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,545,116
Number of Sequences: 53049
Number of extensions: 759073
Number of successful extensions: 2038
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2033
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)