Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20819
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical...    27   9.5  

>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 25/79 (31%), Positives = 40/79 (50%)
 Frame = +1

Query: 7   WTSRIVAKLSPYINVDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARI 186
           W S +V K+SP+I+ DS         E++L +ELSY   LG+  + I +    S   A I
Sbjct: 119 WESYVVGKISPWIDCDSSDPAFASLSEEHLLKELSYICYLGLQTMAIELTRISSPRTAAI 178

Query: 187 LQTYYETSHHPSLIWACVP 243
           L+ +  T +    +W  +P
Sbjct: 179 LKKWIWTRNSRFTVWVQLP 197



 Score = 37.5 bits (83), Expect = 0.009
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +3

Query: 312 WYWWSKFHERLDWDKRV--GVVLELSADLPSQ----EVVKRWLGEPVKAIIVPTSIFHNN 473
           W  W+ F +       V   V L +S++LP +    ++V RW  EP+ A ++ + +F + 
Sbjct: 217 WTIWADFRKNCGNFSGVYFQVALTISSELPDELTELKLVDRWKAEPLAAFVIESGLFISG 276

Query: 474 KKGYPVLSRAHHNL 515
           + G   +  AH NL
Sbjct: 277 RNGEASIPSAHINL 290


>Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical
           protein F59B2.3 protein.
          Length = 418

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +1

Query: 166 SNNLARILQTYYETSHHPSLIWACVPML--CREHIENALKMMKKRKLGMSPGTGGPNSMS 339
           S N   I++  Y ++ + +++    P L   +E IE  +       +G S    GP  M+
Sbjct: 176 SPNPVEIIEHVYGSTENIAIV-TMAPELEGAQEAIEYFVSTGTTVSVGHSSAKLGPGEMA 234

Query: 340 ALIGINVLVLFWSCLQIFHHR 402
            L G  ++   ++ +Q +HHR
Sbjct: 235 VLSGAKMITHLFNAMQSYHHR 255


>Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical
           protein C15H11.8 protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 600 CRYCTKNSMLDLRAPLTITCASCST 526
           C YC     L  +AP T++C  CST
Sbjct: 13  CGYCGAILELPAQAPATVSCKVCST 37


>Z80214-5|CAJ76929.1|  916|Caenorhabditis elegans Hypothetical
           protein C27D8.3b protein.
          Length = 916

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 160 RESNNLARILQTYYETSHHPSLI 228
           R +NNL +  Q ++++ HHPSLI
Sbjct: 844 RPNNNLNQQQQHHHQSHHHPSLI 866


>Z80214-4|CAB02263.1|  982|Caenorhabditis elegans Hypothetical
           protein C27D8.3a protein.
          Length = 982

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 160 RESNNLARILQTYYETSHHPSLI 228
           R +NNL +  Q ++++ HHPSLI
Sbjct: 910 RPNNNLNQQQQHHHQSHHHPSLI 932


>AC024200-17|AAF36002.2|  432|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.1 protein.
          Length = 432

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +1

Query: 49  VDSPSATVRQRHEDYLNEELSYCRGLGVPAIMISIHGRESNNLARILQTYYETS--HHPS 222
           VD+    V+ + ++  + E ++C  L + A ++ I+GR S     IL+ Y   +  +HP+
Sbjct: 318 VDTTEEYVQYQQKEEYDLEAAFCDLLNLSARLLVINGRISFWYPVILENYCAENLPNHPA 377

Query: 223 --LIWACVPMLCREHIENALKMMKKR 294
             LI  C   L R+     L   K R
Sbjct: 378 MDLISNCEQPLTRKTSRRLLSYRKIR 403


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,947,883
Number of Sequences: 27780
Number of extensions: 380489
Number of successful extensions: 1121
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)