Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20817
(796 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 134 1e-32
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 125 8e-30
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 99 4e-22
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 95 1e-20
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 82 1e-16
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 71 1e-13
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 67 2e-12
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 61 2e-10
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 41 2e-04
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 3.1
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 3.1
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 4.1
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 4.1
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 5.4
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 7.1
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 134 bits (324), Expect = 1e-32
Identities = 61/84 (72%), Positives = 65/84 (77%)
Frame = +1
Query: 13 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 192
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 193 FTNHNGTGGKSIYGNKFEDENSPL 264
FT NGTGGKSIYG KF DEN L
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFAL 88
Score = 117 bits (282), Expect = 2e-27
Identities = 53/77 (68%), Positives = 61/77 (79%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F LKH PG+LSMANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS
Sbjct: 86 FALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGS 145
Query: 435 QSGKTSKRIVIKDCGQI 485
SG T RIVI CG +
Sbjct: 146 NSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 125 bits (301), Expect = 8e-30
Identities = 57/86 (66%), Positives = 66/86 (76%)
Frame = +1
Query: 10 VFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 189
V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRVIPNFM+QGG
Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGG 88
Query: 190 DFTNHNGTGGKSIYGNKFEDENSPLS 267
D T +GTGGKSIYG++F DEN LS
Sbjct: 89 DITKGDGTGGKSIYGSRFPDENFKLS 114
Score = 89.0 bits (211), Expect = 7e-19
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 419
F L H PG+LSMANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 111 FKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 99 bits (238), Expect = 4e-22
Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Frame = +1
Query: 13 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 180
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 181 QGGDFTNHNGTGGKSIYGNKFEDENSPL 264
QGGDFT NGTGG+SIYG KFEDEN L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFEL 93
Score = 88.2 bits (209), Expect = 1e-18
Identities = 41/75 (54%), Positives = 53/75 (70%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG V++G V+ IE +
Sbjct: 91 FELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLET 150
Query: 435 QSGKTSKRIVIKDCG 479
++ +VI++CG
Sbjct: 151 KNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 94.7 bits (225), Expect = 1e-20
Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 165
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 166 PNFMLQGGDFTNHNGTGGKSIYGNK-FEDENSPL 264
FM+QGGDF + +GTG +I+ ++ F DEN L
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTL 98
Score = 94.3 bits (224), Expect = 2e-20
Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFG 431
FTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVFG V+EG ++VK+IE T
Sbjct: 96 FTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPV 155
Query: 432 SQSGKTSKRIVIKDCGQI 485
+ + + I +CG++
Sbjct: 156 GANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 81.8 bits (193), Expect = 1e-16
Identities = 41/70 (58%), Positives = 53/70 (75%)
Frame = +1
Query: 43 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 222
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 223 SIYGNKFEDE 252
SIYG+KF+DE
Sbjct: 66 SIYGDKFDDE 75
Score = 78.2 bits (184), Expect = 1e-15
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = +3
Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 419
L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 80 LHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 71.3 bits (167), Expect = 1e-13
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +3
Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422
LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F G++VV +IE
Sbjct: 533 LKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586
Score = 64.1 bits (149), Expect = 2e-11
Identities = 35/72 (48%), Positives = 45/72 (62%)
Frame = +1
Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 225
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 226 IYGNKFEDENSP 261
I+ FEDE SP
Sbjct: 520 IWKKDFEDEISP 531
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 67.3 bits (157), Expect = 2e-12
Identities = 36/72 (50%), Positives = 43/72 (59%)
Frame = +1
Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 225
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 226 IYGNKFEDENSP 261
IYG F E P
Sbjct: 78 IYGEPFAVETHP 89
Score = 32.3 bits (70), Expect = 0.082
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 279 GVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 392
G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 97 GLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 61.3 bits (142), Expect = 2e-10
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +3
Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQS 440
LKH G++SMAN G +TNGSQFFI LD +H +FG VV G+ V+ +E + S
Sbjct: 354 LKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNS 413
Query: 441 GKTSK 455
K
Sbjct: 414 NDHPK 418
Score = 58.8 bits (136), Expect = 8e-10
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +1
Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 225
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 226 IYGNKFEDE 252
I+G F+DE
Sbjct: 341 IWGKPFKDE 349
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1
Query: 34 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 213
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 214 GGKSIY 231
GG+ ++
Sbjct: 63 GGRCVW 68
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 22 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 117
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 445 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 359
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 4.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 317 WFPVLHHHC 343
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -3
Query: 479 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 321
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 412 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 263
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 7.1
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -2
Query: 198 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 19
GEV ++QH +T+++ T S+ TE+ RL + + ++ N +
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936
Query: 18 EEYS 7
E++S
Sbjct: 937 EDHS 940
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,380,361
Number of Sequences: 5004
Number of extensions: 75261
Number of successful extensions: 248
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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