BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20817 (796 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 134 1e-32 SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 125 8e-30 SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 99 4e-22 SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 95 1e-20 SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 82 1e-16 SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 71 1e-13 SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 67 2e-12 SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 61 2e-10 SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 41 2e-04 SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 3.1 SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 3.1 SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 4.1 SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 4.1 SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 5.4 SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 7.1 >SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual Length = 162 Score = 134 bits (324), Expect = 1e-32 Identities = 61/84 (72%), Positives = 65/84 (77%) Frame = +1 Query: 13 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 192 FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64 Query: 193 FTNHNGTGGKSIYGNKFEDENSPL 264 FT NGTGGKSIYG KF DEN L Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFAL 88 Score = 117 bits (282), Expect = 2e-27 Identities = 53/77 (68%), Positives = 61/77 (79%) Frame = +3 Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434 F LKH PG+LSMANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS Sbjct: 86 FALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGS 145 Query: 435 QSGKTSKRIVIKDCGQI 485 SG T RIVI CG + Sbjct: 146 NSGATRARIVIDKCGTV 162 >SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual Length = 201 Score = 125 bits (301), Expect = 8e-30 Identities = 57/86 (66%), Positives = 66/86 (76%) Frame = +1 Query: 10 VFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 189 V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRVIPNFM+QGG Sbjct: 29 VYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGG 88 Query: 190 DFTNHNGTGGKSIYGNKFEDENSPLS 267 D T +GTGGKSIYG++F DEN LS Sbjct: 89 DITKGDGTGGKSIYGSRFPDENFKLS 114 Score = 89.0 bits (211), Expect = 7e-19 Identities = 39/55 (70%), Positives = 45/55 (81%) Frame = +3 Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 419 F L H PG+LSMANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I Sbjct: 111 FKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165 >SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual Length = 356 Score = 99 bits (238), Expect = 4e-22 Identities = 50/88 (56%), Positives = 59/88 (67%), Gaps = 4/88 (4%) Frame = +1 Query: 13 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 180 +F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65 Query: 181 QGGDFTNHNGTGGKSIYGNKFEDENSPL 264 QGGDFT NGTGG+SIYG KFEDEN L Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFEL 93 Score = 88.2 bits (209), Expect = 1e-18 Identities = 41/75 (54%), Positives = 53/75 (70%) Frame = +3 Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434 F LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG V++G V+ IE + Sbjct: 91 FELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLET 150 Query: 435 QSGKTSKRIVIKDCG 479 ++ +VI++CG Sbjct: 151 KNDDPVVPVVIEECG 165 >SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 173 Score = 94.7 bits (225), Expect = 1e-20 Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 7/94 (7%) Frame = +1 Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 165 P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64 Query: 166 PNFMLQGGDFTNHNGTGGKSIYGNK-FEDENSPL 264 FM+QGGDF + +GTG +I+ ++ F DEN L Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTL 98 Score = 94.3 bits (224), Expect = 2e-20 Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 1/78 (1%) Frame = +3 Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFG 431 FTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVFG V+EG ++VK+IE T Sbjct: 96 FTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPV 155 Query: 432 SQSGKTSKRIVIKDCGQI 485 + + + I +CG++ Sbjct: 156 GANSRPKSNVAIVECGEM 173 >SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 155 Score = 81.8 bits (193), Expect = 1e-16 Identities = 41/70 (58%), Positives = 53/70 (75%) Frame = +1 Query: 43 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 222 LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G GG Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65 Query: 223 SIYGNKFEDE 252 SIYG+KF+DE Sbjct: 66 SIYGDKFDDE 75 Score = 78.2 bits (184), Expect = 1e-15 Identities = 33/53 (62%), Positives = 40/53 (75%) Frame = +3 Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 419 L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G+ V K++ Sbjct: 80 LHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132 >SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9|Schizosaccharomyces pombe|chr 3|||Manual Length = 610 Score = 71.3 bits (167), Expect = 1e-13 Identities = 31/54 (57%), Positives = 39/54 (72%) Frame = +3 Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422 LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F G++VV +IE Sbjct: 533 LKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586 Score = 64.1 bits (149), Expect = 2e-11 Identities = 35/72 (48%), Positives = 45/72 (62%) Frame = +1 Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 225 G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD +GTGG+S Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519 Query: 226 IYGNKFEDENSP 261 I+ FEDE SP Sbjct: 520 IWKKDFEDEISP 531 >SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr 2|||Manual Length = 463 Score = 67.3 bits (157), Expect = 2e-12 Identities = 36/72 (50%), Positives = 43/72 (59%) Frame = +1 Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 225 G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+S Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77 Query: 226 IYGNKFEDENSP 261 IYG F E P Sbjct: 78 IYGEPFAVETHP 89 Score = 32.3 bits (70), Expect = 0.082 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +3 Query: 279 GVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 392 G++ MA + N SQFFIT T +G+ +FG VV Sbjct: 97 GLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134 >SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual Length = 516 Score = 61.3 bits (142), Expect = 2e-10 Identities = 29/65 (44%), Positives = 38/65 (58%) Frame = +3 Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQS 440 LKH G++SMAN G +TNGSQFFI LD +H +FG VV G+ V+ +E + S Sbjct: 354 LKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNS 413 Query: 441 GKTSK 455 K Sbjct: 414 NDHPK 418 Score = 58.8 bits (136), Expect = 8e-10 Identities = 32/69 (46%), Positives = 44/69 (63%) Frame = +1 Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 225 G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+S Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340 Query: 226 IYGNKFEDE 252 I+G F+DE Sbjct: 341 IWGKPFKDE 349 >SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating transcription Rct1|Schizosaccharomyces pombe|chr 2|||Manual Length = 432 Score = 41.1 bits (92), Expect = 2e-04 Identities = 23/66 (34%), Positives = 33/66 (50%) Frame = +1 Query: 34 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGT 213 + +G +VI+L PKTCENF LC K Y F+ + N+ Q GD G Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62 Query: 214 GGKSIY 231 GG+ ++ Sbjct: 63 GGRCVW 68 >SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizosaccharomyces pombe|chr 2|||Manual Length = 483 Score = 27.1 bits (57), Expect = 3.1 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = +1 Query: 22 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 117 V D+ P+GKI+I R D+ N C+ Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50 >SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Schizosaccharomyces pombe|chr 2|||Manual Length = 423 Score = 27.1 bits (57), Expect = 3.1 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 445 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 359 FP WL K S CL +P T+ P T + S Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329 >SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces pombe|chr 1|||Manual Length = 192 Score = 26.6 bits (56), Expect = 4.1 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +2 Query: 317 WFPVLHHHC 343 WFP +HHHC Sbjct: 97 WFPEVHHHC 105 >SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr 2|||Manual Length = 904 Score = 26.6 bits (56), Expect = 4.1 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = -3 Query: 479 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 321 T VFD + +L+ ++++DN +IPK+ A S + +G Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577 >SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1|||Manual Length = 654 Score = 26.2 bits (55), Expect = 5.4 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -1 Query: 412 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 263 LT +P TTF T +P + +V ++++ PL+ + P PV L Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85 >SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein 3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual Length = 1385 Score = 25.8 bits (54), Expect = 7.1 Identities = 15/64 (23%), Positives = 30/64 (46%) Frame = -2 Query: 198 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 19 GEV ++QH +T+++ T S+ TE+ RL + + ++ N + Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936 Query: 18 EEYS 7 E++S Sbjct: 937 EDHS 940 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,380,361 Number of Sequences: 5004 Number of extensions: 75261 Number of successful extensions: 248 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 221 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 240 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 387388442 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -