Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20817
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    29   0.13 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.5  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   4.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.2  
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    24   6.2  

>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +2

Query: 83  PRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAIS 241
           P ++K S+P     K S T  P+S    P   C  G     T  G+S S  +S
Sbjct: 307 PIKLKLSLPYVEREKCSKTFRPWSFALGPGQMCAGGERAKDTCAGDSGSPLMS 359


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = +3

Query: 246  RREFTLKHTGPG-VLSMANAGADTNGSQFFITTV-KTSWLDGRHVVFGNVVEGMEVVKQI 419
            R EFT+ H G G V+   + G         +  V +    DGR +++   V      KQ+
Sbjct: 2514 REEFTMAHDGDGAVIQAQHKGIKHMAYDKLLQRVSEIEMTDGRKILYQYDVRAERTFKQV 2573

Query: 420  ETFGSQSGKTSKRIVIKD 473
               G      S++  I+D
Sbjct: 2574 R--GKDGKVMSEKYYIRD 2589


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 317 WFPVLHHHCQD 349
           W+P + HHC D
Sbjct: 100 WYPEIKHHCPD 110


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 351  SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 455
            SWL   HV    V E   +V+    +GS S +T+K
Sbjct: 3198 SWLLLAHVAPAAVREVKRIVQNFFGWGSSSSRTTK 3232


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 208 GTGGKSIYGNKFEDENSPLSTLDLASSPWLMPVL 309
           G G ++ +G  F  EN+  S  +    PW + +L
Sbjct: 115 GCGHRNPHGMIFTIENNQFSESEYGEYPWTVAIL 148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,421
Number of Sequences: 2352
Number of extensions: 18992
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)