Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20817
(796 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 136 1e-32
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 134 8e-32
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 128 3e-30
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 128 4e-30
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 126 2e-29
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 123 2e-28
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 122 4e-28
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 121 6e-28
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 119 3e-27
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 119 3e-27
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 118 3e-27
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 116 2e-26
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 108 5e-24
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 104 6e-23
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 104 8e-23
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 97 1e-20
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 88 5e-18
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 82 5e-16
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 78 6e-15
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 75 5e-14
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 68 6e-12
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 64 8e-11
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 54 8e-08
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 49 4e-06
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 41 0.001
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 35 0.054
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 34 0.095
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 34 0.095
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 34 0.095
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 30 2.0
At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B li... 28 6.2
At3g08630.1 68416.m01002 expressed protein 28 6.2
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 8.2
At3g09000.1 68416.m01053 proline-rich family protein 28 8.2
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 136 bits (330), Expect = 1e-32
Identities = 65/91 (71%), Positives = 72/91 (79%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 162
P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FHRV
Sbjct: 5 PKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRV 64
Query: 163 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 255
IPNFM QGGDFT NGTGG+SIYG KFEDEN
Sbjct: 65 IPNFMCQGGDFTKGNGTGGESIYGAKFEDEN 95
Score = 127 bits (307), Expect = 7e-30
Identities = 57/78 (73%), Positives = 66/78 (84%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS
Sbjct: 96 FERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGS 155
Query: 435 QSGKTSKRIVIKDCGQIA 488
SGK +K +VI DCG+I+
Sbjct: 156 SSGKPTKPVVIADCGEIS 173
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 134 bits (323), Expect = 8e-32
Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 162
P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS FHRV
Sbjct: 4 PKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRV 63
Query: 163 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 255
IPNFM QGGDFT NGTGG+SIYG+KFEDEN
Sbjct: 64 IPNFMCQGGDFTAGNGTGGESIYGSKFEDEN 94
Score = 127 bits (306), Expect = 1e-29
Identities = 56/78 (71%), Positives = 66/78 (84%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS
Sbjct: 95 FERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGS 154
Query: 435 QSGKTSKRIVIKDCGQIA 488
SGK +K +V+ DCGQ++
Sbjct: 155 SSGKPTKPVVVADCGQLS 172
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 128 bits (310), Expect = 3e-30
Identities = 60/91 (65%), Positives = 70/91 (76%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 162
PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIFHRV
Sbjct: 4 PRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRV 63
Query: 163 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 255
IP FM QGGDFT NGTGG+SIYG KF+DEN
Sbjct: 64 IPGFMCQGGDFTAKNGTGGESIYGAKFKDEN 94
Score = 120 bits (288), Expect = 1e-27
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F KHTG G+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE GS
Sbjct: 95 FIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGS 154
Query: 435 QSGKTSKRIVIKDCGQIA 488
SGKTSK + I DCGQ++
Sbjct: 155 DSGKTSKVVTITDCGQLS 172
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 128 bits (309), Expect = 4e-30
Identities = 58/78 (74%), Positives = 66/78 (84%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F KHTGPG+LSMANAGA+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE GS
Sbjct: 96 FIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGS 155
Query: 435 QSGKTSKRIVIKDCGQIA 488
SG+TSK +VI DCGQI+
Sbjct: 156 DSGRTSKPVVIADCGQIS 173
Score = 126 bits (303), Expect = 2e-29
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 7/91 (7%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 162
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 163 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 255
IP FM QGGDFT NGTGG+SIYG+KF+DEN
Sbjct: 65 IPKFMCQGGDFTAGNGTGGESIYGSKFKDEN 95
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 126 bits (304), Expect = 2e-29
Identities = 58/94 (61%), Positives = 69/94 (73%), Gaps = 7/94 (7%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 162
P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS FHR+
Sbjct: 4 PKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRI 63
Query: 163 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDENSPL 264
IP FM QGGDFT NGTGG+SIYG+KFEDEN L
Sbjct: 64 IPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKL 97
Score = 119 bits (286), Expect = 3e-27
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F LKHTGPG+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E GS
Sbjct: 95 FKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGS 154
Query: 435 QSGKTSKRIVIKDCGQI 485
G S+R+VI+DCG++
Sbjct: 155 DMGNPSERVVIEDCGEL 171
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 123 bits (296), Expect = 2e-28
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = +1
Query: 7 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 186
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I +FM+QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 187 GDFTNHNGTGGKSIYGNKFEDENSPL 264
GDFT NGTGG SIYG KFEDEN L
Sbjct: 156 GDFTEGNGTGGISIYGAKFEDENFTL 181
Score = 102 bits (245), Expect = 2e-22
Identities = 47/78 (60%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
FTLKHTGPG+LSMANAG +TNGSQFFI TVKTSWLD +HVVFG V+EGM++V+ +E+ +
Sbjct: 179 FTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQET 238
Query: 435 QSGKTSKR-IVIKDCGQI 485
++ K+ I CG++
Sbjct: 239 RAFDVPKKGCRIYACGEL 256
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 122 bits (293), Expect = 4e-28
Identities = 59/91 (64%), Positives = 70/91 (76%), Gaps = 4/91 (4%)
Frame = +1
Query: 7 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNF 174
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI +F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 175 MLQGGDFTNHNGTGGKSIYGNKFEDENSPLS 267
M+QGGDF NGTGGKS+YG F+DEN LS
Sbjct: 150 MIQGGDFEKGNGTGGKSVYGRTFKDENFKLS 180
Score = 116 bits (278), Expect = 2e-26
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F L H GPGVLSMANAG +TNGSQFFI T+KTSWLDGRHVVFG V+EGMEVVK IE +
Sbjct: 177 FKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQET 236
Query: 435 QSG-KTSKRIVIKDCGQI 485
G + K++VI DCGQ+
Sbjct: 237 DRGDRPRKKVVIADCGQL 254
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 121 bits (291), Expect = 6e-28
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F LKHTGPGVLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G
Sbjct: 123 FKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGK 182
Query: 435 QSGKTSKRIVIKDCGQI 485
QSG ++VI D G++
Sbjct: 183 QSGTPKSKVVIADSGEL 199
Score = 118 bits (283), Expect = 6e-27
Identities = 56/93 (60%), Positives = 66/93 (70%), Gaps = 7/93 (7%)
Frame = +1
Query: 7 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 165
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 166 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENSPL 264
P+FM+QGGDFT+ NG GG+SIYG KF DEN L
Sbjct: 93 PSFMIQGGDFTHGNGMGGESIYGQKFADENFKL 125
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 119 bits (286), Expect = 3e-27
Identities = 58/92 (63%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 159
P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS FHR
Sbjct: 7 PNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHR 66
Query: 160 VIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 255
VI FM QGGDF+N NGTGG+SIYG KF DEN
Sbjct: 67 VIKGFMAQGGDFSNGNGTGGESIYGGKFSDEN 98
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/76 (56%), Positives = 53/76 (69%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG VVEGM V+K++E G+
Sbjct: 99 FRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT 158
Query: 435 QSGKTSKRIVIKDCGQ 482
GK + + I DCG+
Sbjct: 159 SDGKPTSPVKIIDCGE 174
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 119 bits (286), Expect = 3e-27
Identities = 58/92 (63%), Positives = 66/92 (71%), Gaps = 8/92 (8%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 159
P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS FHR
Sbjct: 7 PNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHR 66
Query: 160 VIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 255
VI FM QGGDF+N NGTGG+SIYG KF DEN
Sbjct: 67 VIKGFMAQGGDFSNGNGTGGESIYGGKFSDEN 98
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/76 (56%), Positives = 53/76 (69%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG VVEGM V+K++E G+
Sbjct: 99 FRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT 158
Query: 435 QSGKTSKRIVIKDCGQ 482
GK + + I DCG+
Sbjct: 159 SDGKPTSPVKIIDCGE 174
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 118 bits (285), Expect = 3e-27
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F LKHTGPG LSMANAG DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G+
Sbjct: 126 FKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGN 185
Query: 435 QSGKTSKRIVIKDCGQI 485
QSG ++VI D G++
Sbjct: 186 QSGTPKSKVVIVDSGEL 202
Score = 118 bits (284), Expect = 4e-27
Identities = 57/93 (61%), Positives = 66/93 (70%), Gaps = 7/93 (7%)
Frame = +1
Query: 7 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 165
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 166 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENSPL 264
P+FMLQGGDFT+ NG GG+SIYG KF DEN L
Sbjct: 96 PSFMLQGGDFTHGNGMGGESIYGEKFADENFKL 128
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 116 bits (278), Expect = 2e-26
Identities = 52/93 (55%), Positives = 69/93 (74%), Gaps = 7/93 (7%)
Frame = +1
Query: 7 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 165
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 166 PNFMLQGGDFTNHNGTGGKSIYGNKFEDENSPL 264
P FM+QGGDFT +G GG+SIYG+KF DEN L
Sbjct: 120 PGFMIQGGDFTRGDGRGGESIYGDKFADENFKL 152
Score = 109 bits (261), Expect = 3e-24
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 434
F LKHTGPG LSMAN+G D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G
Sbjct: 150 FKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQ 209
Query: 435 QSGKTSKRIVIKDCGQIA 488
SG ++I G+++
Sbjct: 210 DSGVPKANVIIFASGEVS 227
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 108 bits (259), Expect = 5e-24
Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 8/94 (8%)
Frame = +1
Query: 7 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHRV 162
+ F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+ FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 163 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDENSPL 264
I FM+QGGD + ++GTGG+SIYG KF+DEN L
Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDENFEL 98
Score = 92.3 bits (219), Expect = 3e-19
Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG- 431
F LKH G+LSMAN+G +TNGSQFFITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 96 FELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSI 155
Query: 432 SQSGKTSKRIVIKDCGQI 485
+ S+ +VI DCG+I
Sbjct: 156 EEQSCPSQDVVIHDCGEI 173
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 104 bits (250), Expect = 6e-23
Identities = 50/89 (56%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 168
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 169 NFMLQGGDFTNHNGTGGKSIYGNKFEDEN 255
+FM+Q GDF ++G+G SIYG+KFEDEN
Sbjct: 92 DFMVQSGDFLKNDGSGCMSIYGHKFEDEN 120
Score = 87.8 bits (208), Expect = 7e-18
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV-EGMEVVKQIETFG 431
FT KHTGPG+LSMAN+G +TNG QFFIT K WLD +HVVFG V+ +G+ V+++IE
Sbjct: 121 FTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVMRKIENVA 180
Query: 432 -SQSGKTSKRIVIKDCGQI 485
+ + +VI +CG++
Sbjct: 181 IGPNNRPKLAVVITECGEM 199
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 104 bits (249), Expect = 8e-23
Identities = 51/95 (53%), Positives = 60/95 (63%), Gaps = 8/95 (8%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 159
P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS FHR
Sbjct: 7 PQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHR 66
Query: 160 VIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENSPL 264
++ Q GDF N NGT G+SIY KF DE+ L
Sbjct: 67 IMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKL 101
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +3
Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQS 440
L+H G+LSM+ A D GS F IT LD +VVFG +++G E++K+IE G +
Sbjct: 101 LRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDEE 160
Query: 441 GKTSKRIVIKDCGQ 482
GK + + I CG+
Sbjct: 161 GKPTVSVKIIRCGE 174
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 97.1 bits (231), Expect = 1e-20
Identities = 49/90 (54%), Positives = 57/90 (63%), Gaps = 7/90 (7%)
Frame = +1
Query: 7 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 165
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 166 PNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 255
F++QGGD + +G SIYG F DEN
Sbjct: 108 SGFVIQGGDIIHGDGKSSDSIYGGTFPDEN 137
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Frame = +3
Query: 255 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFG 431
F ++H+ G+++MAN G D+NGSQFFITTVK SWL+G HVV G V++GM+ V IE G
Sbjct: 138 FKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAG 197
Query: 432 SQSGKTSKRIVIKDCGQI 485
+ SGK K++VI D G+I
Sbjct: 198 TYSGKPRKKVVIADSGEI 215
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 88.2 bits (209), Expect = 5e-18
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Frame = +1
Query: 4 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 162
P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F +
Sbjct: 4 PKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHI 63
Query: 163 IPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 252
+P+ M GGD N + I+ + +DE
Sbjct: 64 VPDLMWCGGDIIFEN----EPIHSEELDDE 89
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Frame = +3
Query: 255 FTLKHT-GPGVLSMANAGADTNGSQFFITTVKTSW-LDGRHVVFGNVVEGMEVVKQI--E 422
F L H GPG++SMA D+NGSQF I +DG HVV G VVEG+++++ I E
Sbjct: 91 FILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKE 146
Query: 423 TFGSQSGKTSKRIVIKDCGQIA*FKS 500
+ + SK +VI DCG+++ ++S
Sbjct: 147 VITTTTRTPSKPVVIADCGELSDYRS 172
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 81.8 bits (193), Expect = 5e-16
Identities = 37/55 (67%), Positives = 44/55 (80%)
Frame = +3
Query: 258 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422
+L+H P LSMANAG +TNGSQFFITTV T WLD +H VFG VV+GM+VV+ IE
Sbjct: 553 SLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIE 607
Score = 61.7 bits (143), Expect = 5e-10
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +1
Query: 43 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 222
LG I ++L + PKT ENF C G+ Y +FHRVI FM+Q GD +GTGG+
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTGDPLG-DGTGGQ 539
Query: 223 SIYGNKFEDE 252
SI+G +FEDE
Sbjct: 540 SIWGREFEDE 549
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 78.2 bits (184), Expect = 6e-15
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = +3
Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 419
LKHTG G+LSMANAG +TNGSQFFIT LDG+H +FG V GMEV+K++
Sbjct: 88 LKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRL 140
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/78 (42%), Positives = 52/78 (66%)
Frame = +1
Query: 19 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFT 198
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +F++QGGD T
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPT 66
Query: 199 NHNGTGGKSIYGNKFEDE 252
G GG+SIYG+KFEDE
Sbjct: 67 G-TGRGGESIYGSKFEDE 83
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 74.9 bits (176), Expect = 5e-14
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +1
Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 225
G + IEL D+ P+ CENF LC E+G+ Y G FHR I NFM+QGGD T G GG+S
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTG-TGKGGES 408
Query: 226 IYGNKFEDE-NSPL 264
I+G F+DE NS L
Sbjct: 409 IWGKPFKDEPNSKL 422
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +3
Query: 261 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422
L H+G GV+SMAN+G TNGSQFF+ + L+ +H VFG VV G+ + +E
Sbjct: 422 LLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAME 475
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = +1
Query: 43 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 222
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM+QGGD G GG
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD-PKGTGKGGT 64
Query: 223 SIYGNKFEDE 252
SI+G KF DE
Sbjct: 65 SIWGKKFNDE 74
Score = 64.5 bits (150), Expect = 8e-11
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +3
Query: 258 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422
+LKH G+LSMAN+G +TNGSQFFIT K L+G + +FG V+ G EV+ +E
Sbjct: 78 SLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIME 132
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 64.5 bits (150), Expect = 8e-11
Identities = 35/69 (50%), Positives = 44/69 (63%)
Frame = +1
Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKS 225
G I +EL PK+ NF LC +G+ + +IFHRVIP F++QGGD T +GTGG S
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTGGDS 77
Query: 226 IYGNKFEDE 252
IYG F DE
Sbjct: 78 IYGGVFADE 86
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +3
Query: 261 LKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVVFGNV 389
L+ + G+++MANA + ++NGSQFF T K WLD +H +FG V
Sbjct: 91 LRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 54.4 bits (125), Expect = 8e-08
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +1
Query: 43 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 222
LG IVI+L SD P TC+NF LC K Y G +FH V +F Q GD T G GG
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGD 64
Query: 223 SIY 231
SIY
Sbjct: 65 SIY 67
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 261 LKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI-ETFGS 434
LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I E +
Sbjct: 86 LKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRINEAYVD 145
Query: 435 QSGKTSKRIVIK 470
+ K I IK
Sbjct: 146 PKNRPYKNIRIK 157
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 7 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 186
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++ G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152
Query: 187 G 189
G
Sbjct: 153 G 153
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 315 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 452
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 34 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 192
D G + IEL D P + F C + G+ +KG +F RV+ +F++Q GD
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGD 132
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 258 TLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422
+LKH ++ A + G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 152 SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 35.1 bits (77), Expect = 0.054
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 31 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP-NFMLQG 186
D PLG++V+ L P T F+ +CT YK + H++ P + L G
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFPGQYFLAG 132
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 309 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIET 425
D +F ITT + LDG ++VFG V+EG++VV I +
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 231
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 189
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 324 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 189
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 324 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 34.3 bits (75), Expect = 0.095
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 46 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGG 189
G I +EL + +P+ + F LC + +KG F RVI N+++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 324 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 422
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 421 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRV 257
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV 71
>At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 656
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 624 LLLM*RTGYCIYFHALLVCSLLHFCYYI 707
++L R G +YF C L+HF YY+
Sbjct: 629 VILKFREGNIVYFFCSRSCFLMHFSYYL 656
>At3g08630.1 68416.m01002 expressed protein
Length = 339
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = +1
Query: 184 GGDFTNHNGT----GGKSIYGNKFEDENSPLSTLDLASSPW 294
GG NH G GG YG E+E+SP L L W
Sbjct: 65 GGSIGNHGGGSGSGGGGGGYGGSEEEESSPWGPLGLFIQGW 105
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 134 VTRAPFSIVSSPISCCKEGTSPTITALG 217
VT +PF V+ P+ C EGT P G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Frame = +2
Query: 77 SLPRRVKTSVPCALARKASVTRAPF-----SIVSSPISCCKEGTSPTITALGESPSTAIS 241
S PR S ++R A+ TR P SIVSS SPT+ +L ++PS S
Sbjct: 225 SNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSSKAPSRGTSPSPTVNSLSKAPSRGTS 284
Query: 242 LKTRIHP*AHW 274
++ W
Sbjct: 285 PSPTLNSSRPW 295
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,741,359
Number of Sequences: 28952
Number of extensions: 408806
Number of successful extensions: 1184
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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