Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20816
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    25   0.80 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 355 KPLYYLNSGSWEVTYYKNLAVLLN 426
           K  +YL+ G W  T Y N  V+ N
Sbjct: 484 KDAWYLDHGFWGTTEYHNWRVVYN 507


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 625 ILVPLQQIHFELFYFP 578
           I+VP+  +H++  Y+P
Sbjct: 389 IMVPISGLHYDPEYYP 404


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 126 SIWKFTIFL*IVLINKKIFAKF*VA 52
           ++WK TIFL  + ++ ++ +K  V+
Sbjct: 9   TLWKLTIFLSSMCLDPRLNSKIQVS 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,121
Number of Sequences: 336
Number of extensions: 2869
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)