Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20815
(704 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 120 7e-27
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 120 7e-27
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 120 7e-27
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 120 7e-27
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 118 3e-26
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 33 0.75
X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRN... 33 1.3
AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open readi... 33 1.3
AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein. 33 1.3
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 30.3 bits (65), Expect = 7.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV +GH IE P P
Sbjct: 127 ALAASALPALVMPKGHRIEEVPELP 151
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 126
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 160 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 219
Query: 688 GPLII 702
GP II
Sbjct: 220 GPCII 224
Score = 81.0 bits (191), Expect = 4e-15
Identities = 38/63 (60%), Positives = 49/63 (77%)
Frame = +1
Query: 70 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 249
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 250 GHK 258
GH+
Sbjct: 73 GHQ 75
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 141 ALAASALPALVMSKGHRIEEVPELP 165
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 120 bits (288), Expect = 7e-27
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 104 bits (249), Expect = 4e-22
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 688 GPLII 702
GP II
Sbjct: 206 GPCII 210
Score = 80.6 bits (190), Expect = 5e-15
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE P P
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELP 151
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 118 bits (283), Expect = 3e-26
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410
QT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 96.7 bits (230), Expect = 7e-20
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = +1
Query: 508 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 687
+ PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRN RRIQR+
Sbjct: 146 EFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN-RRIQRR 204
Query: 688 GPLII 702
GP II
Sbjct: 205 GPCII 209
Score = 82.6 bits (195), Expect = 1e-15
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +1
Query: 73 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 252
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 253 HK 258
H+
Sbjct: 60 HQ 61
Score = 33.9 bits (74), Expect = 0.57
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 452 SVAATGVPALVQARGHIIERFPSFP 526
++AA+ +PALV ++GH IE FP P
Sbjct: 127 ALAASALPALVMSKGHRIEEFPELP 151
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 33.5 bits (73), Expect = 0.75
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +2
Query: 281 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 445
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 446 GGSVAATGVPA 478
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRNA
from the Hox2 locus. ).
Length = 301
Score = 32.7 bits (71), Expect = 1.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 519 ASPGCSRQSPGDQQDQTGCHLPEAPQGMV 605
A PGC +++ GD DQ+ C PEA V
Sbjct: 271 APPGCPKEAAGDASDQSTCTSPEASPSSV 299
>AL929472-9|CAH70084.1| 159|Homo sapiens chromosome 1 open reading
frame 122 protein.
Length = 159
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 234 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 407
RE+G W + SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
>AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein.
Length = 108
Score = 32.7 bits (71), Expect = 1.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 519 ASPGCSRQSPGDQQDQTGCHLPEAPQGMV 605
A PGC +++ GD DQ+ C PEA V
Sbjct: 78 APPGCPKEAAGDASDQSTCTSPEASPSSV 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,087,698
Number of Sequences: 237096
Number of extensions: 2264672
Number of successful extensions: 7170
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7048
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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