Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20814
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 3.8
AL645612-1|CAH70666.1| 557|Homo sapiens family with sequence si... 31 3.8
AL157893-1|CAH72466.1| 655|Homo sapiens family with sequence si... 31 3.8
AK000785-1|BAA91378.1| 632|Homo sapiens protein ( Homo sapiens ... 31 3.8
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 31 3.8
AB095940-1|BAC23116.1| 572|Homo sapiens KIAA2020 protein protein. 31 3.8
BC110602-1|AAI10603.1| 535|Homo sapiens EPN3 protein protein. 30 6.7
AF324241-1|AAG45223.1| 632|Homo sapiens epsin 3 protein. 30 6.7
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/68 (33%), Positives = 28/68 (41%)
Frame = +1
Query: 133 PTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVNGRVHVPPARSRTGAFNGP 312
PT PT T T PT I T + T T TP + V P + TG GP
Sbjct: 4140 PT-PT-PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGP 4197
Query: 313 GVHT*SSP 336
HT ++P
Sbjct: 4198 PTHTSTAP 4205
>AL645612-1|CAH70666.1| 557|Homo sapiens family with sequence
similarity 22, member D protein.
Length = 557
Score = 31.1 bits (67), Expect = 3.8
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +3
Query: 225 PYYNPRAVGGEWPRSCTASPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQ 404
P Y P G + P +C P+P R + +AR RP P P +R +TK+ L
Sbjct: 378 PVYLPSKAGPKAPTACLPPPRPQRPVTKAR--------RPPPRP--HRRAETKA-RLPPP 426
Query: 405 RTRSSAPLKRPNWLTP 452
R + A K P + P
Sbjct: 427 RPQRPAETKVPEEIPP 442
>AL157893-1|CAH72466.1| 655|Homo sapiens family with sequence
similarity 22, member A protein.
Length = 655
Score = 31.1 bits (67), Expect = 3.8
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +3
Query: 225 PYYNPRAVGGEWPRSCTASPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQ 404
P Y P G + P +C P+P R + +AR RP P P +R +TK+ L
Sbjct: 227 PVYLPSKAGPKAPTACLPPPRPQRPVTKAR--------RPPPRP--HRRAETKA-RLPPP 275
Query: 405 RTRSSAPLKRPNWLTP 452
R + A K P + P
Sbjct: 276 RPQRPAETKVPEEIPP 291
>AK000785-1|BAA91378.1| 632|Homo sapiens protein ( Homo sapiens
cDNA FLJ20778 fis, clone COL05704. ).
Length = 632
Score = 31.1 bits (67), Expect = 3.8
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +1
Query: 142 PTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVNGRVHVPPARSRTGAFNGPGVH 321
P+ + W+P P+ + + W +T +L+++ E W + P + A N P
Sbjct: 341 PSADPWSPIPSGTVLSRSQPWD--LTPMLSSS-EPWGRTPVLPAGPPTTDPWALNSPHYK 397
Query: 322 T*SSPPDPCRYQLRTATRKRSLLPSATREPDLQPHSSDRT 441
S+ DP L T+ ++T +P +P S T
Sbjct: 398 LPSTGADPWGASLETSDTPGG---ASTFDPFAKPPESTET 434
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 31.1 bits (67), Expect = 3.8
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Frame = +1
Query: 130 IPTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVNGRVHVPPARSRTGAFNG 309
+PT+ T+ T T PT + T + TT P V+ VP S +
Sbjct: 138 VPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVPTTTSIPTTTSV 197
Query: 310 PGVHT*SS--PPDPCRYQLR--TATRKRSLLPSATREPDLQ 420
P T S+ PP P Q AT S P+ T LQ
Sbjct: 198 PVTTTVSTFVPPMPLPRQNHEPVATSPSSPQPAETHPTTLQ 238
>AB095940-1|BAC23116.1| 572|Homo sapiens KIAA2020 protein protein.
Length = 572
Score = 31.1 bits (67), Expect = 3.8
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +3
Query: 225 PYYNPRAVGGEWPRSCTASPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQ 404
P Y P G + P +C P+P R + +AR RP P P +R +TK+ L
Sbjct: 393 PVYLPSKAGPKAPTACLPPPRPQRPVTKAR--------RPPPRP--HRRAETKA-RLPPP 441
Query: 405 RTRSSAPLKRPNWLTP 452
R + A K P + P
Sbjct: 442 RPQRPAETKVPEEIPP 457
>BC110602-1|AAI10603.1| 535|Homo sapiens EPN3 protein protein.
Length = 535
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +1
Query: 142 PTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVNGRVHVPPARSRTGAFNGPGVH 321
P+ + W+P P+ + + W +T +L+++ E W + P + A N P
Sbjct: 330 PSADPWSPIPSGTVLSRSQPWD--LTPMLSSS-EPWGRTPVLPAGPPTTDPWALNSPHHK 386
Query: 322 T*SSPPDPCRYQLRTATRKRSLLPSATREPDLQPHSSDRT 441
S+ DP L T+ ++T +P +P S T
Sbjct: 387 LPSTGADPWGASLETSDTPGG---ASTFDPFAKPPESTET 423
>AF324241-1|AAG45223.1| 632|Homo sapiens epsin 3 protein.
Length = 632
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +1
Query: 142 PTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWAVNGRVHVPPARSRTGAFNGPGVH 321
P+ + W+P P+ + + W +T +L+++ E W + P + A N P
Sbjct: 341 PSADPWSPIPSGTVLSRSQPWD--LTPMLSSS-EPWGRTPVLPAGPPTTDPWALNSPHHK 397
Query: 322 T*SSPPDPCRYQLRTATRKRSLLPSATREPDLQPHSSDRT 441
S+ DP L T+ ++T +P +P S T
Sbjct: 398 LPSTGADPWGASLETSDTPGG---ASTFDPFAKPPESTET 434
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,847,916
Number of Sequences: 237096
Number of extensions: 2142219
Number of successful extensions: 7046
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7041
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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