Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20814
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA... 30 2.6
AE014297-154|AAF52091.1| 934|Drosophila melanogaster CG14656-PA... 30 3.4
X01472-1|CAA25701.1| 439|Drosophila melanogaster protein ( Dros... 29 6.0
BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p pro... 29 7.9
AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p pro... 29 7.9
AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC... 29 7.9
AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB... 29 7.9
AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA... 29 7.9
AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD... 29 7.9
>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
protein.
Length = 2112
Score = 30.3 bits (65), Expect = 2.6
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = +2
Query: 281 PEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEK 460
PE Q P+T + P + T T PQ+ YPQ+P + T T
Sbjct: 1619 PEKPQKPTTTEY--PQKPTTTEEPTPEKPQKPTTTEYPQKPTTEEPTTTSIPGYNPTTTS 1676
Query: 461 IELYSTTLVPVAKAT 505
+ Y+ T P+ T
Sbjct: 1677 VPGYNPTTTPIPVET 1691
>AE014297-154|AAF52091.1| 934|Drosophila melanogaster CG14656-PA
protein.
Length = 934
Score = 29.9 bits (64), Expect = 3.4
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Frame = +1
Query: 265 VHVPPAR--SRTGAFNGPGVHT*SSPPDPCRYQLRTATRKRSLLPSATRE----PDLQPH 426
+H PP + TGA P + +PP RY TAT + +P ++ P Q H
Sbjct: 698 LHQPPPHHFTSTGAGPPPALFQQQAPPQLTRYTPATATTAATFVPPQQQQVVYNPQQQQH 757
Query: 427 SSDR 438
SS R
Sbjct: 758 SSLR 761
>X01472-1|CAA25701.1| 439|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 439
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 272 YRQPEAAQAPSTGQ-VYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQAT 436
Y+ P+ Q P T +Y + + P Q+N V+ P Q +N F P Q T
Sbjct: 241 YQAPQIYQTPPTNNPLYRHPIPYHPNPNNVFQPSQQNNVFQPSQ-QNNAFQPNQRT 295
>BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p
protein.
Length = 756
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 439
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 568 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 617
>AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p
protein.
Length = 836
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 439
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 645 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 694
>AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC,
isoform C protein.
Length = 836
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 439
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 645 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 694
>AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB,
isoform B protein.
Length = 759
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 439
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 568 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 617
>AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA,
isoform A protein.
Length = 759
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 439
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 568 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 617
>AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD,
isoform D protein.
Length = 918
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 290 AQAPSTGQVYIPDRRRQTLADTSYVPQQE-NEVYYPQQPENPIFSPTQATE 439
A+ G V +P RQT VPQQ+ + PQQ + P F Q +
Sbjct: 568 ARLEENGNV-LPSTLRQTTPQPQVVPQQQPQQQQQPQQQQQPTFYQPQLVQ 617
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,360,869
Number of Sequences: 53049
Number of extensions: 669612
Number of successful extensions: 2508
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2504
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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