Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20814
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 34 0.083
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 29 3.1
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 29 3.1
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 29 3.1
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 29 3.1
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 3.1
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 3.1
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.1
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 3.1
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 3.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.1
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 3.1
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 29 3.1
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 29 3.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 3.1
Z75527-2|CAA99775.2| 636|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF370361-1|AAK52514.1| 636|Caenorhabditis elegans putative tran... 29 4.1
AB096001-1|BAE53417.1| 676|Caenorhabditis elegans bHLH-PAS fact... 29 4.1
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 5.4
AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 7.2
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 28 7.2
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 7.2
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 7.2
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 28 7.2
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 34.3 bits (75), Expect = 0.083
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 129 YTYNPYYGNVDSLSYGSGDSNR--GGLVMSRYYNPYYN 236
Y N YYGN YG+G N+ GG + YYN YYN
Sbjct: 138 YYGNGYYGNGYGNGYGNGYYNQYNGGYGGNGYYNQYYN 175
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 275 RQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPEN 409
+Q + P Y P R++Q +Y P+Q+ + Y QQ +N
Sbjct: 39 QQQQQQGRPQQYAGYPPQRQQQQYNMNAYAPRQQQQQQYQQQQQN 83
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 492 KGIGADWPRLGRALEVPHRDIQHIRQNY 519
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 602 KGIGADWPRLGRALEVPHRDIQHIRQNY 629
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 1506 KGIGADWPRLGRALEVPHRDIQHIRQNY 1533
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 1506 KGIGADWPRLGRALEVPHRDIQHIRQNY 1533
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 1506 KGIGADWPRLGRALEVPHRDIQHIRQNY 1533
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 1512 KGIGADWPRLGRALEVPHRDIQHIRQNY 1539
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 1512 KGIGADWPRLGRALEVPHRDIQHIRQNY 1539
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 1506 KGIGADWPRLGRALEVPHRDIQHIRQNY 1533
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 1512 KGIGADWPRLGRALEVPHRDIQHIRQNY 1539
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 1512 KGIGADWPRLGRALEVPHRDIQHIRQNY 1539
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 609 KGIGADWPRLGRALEVPHRDIQHIRQNY 636
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 RAVGGEWPRSCTASPKPHRRLQRARCTY 323
+ +G +WPR A PHR +Q R Y
Sbjct: 682 KGIGADWPRLGRALEVPHRDIQHIRQNY 709
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 359 YVPQQENEVYYPQQPENPIFSPTQATELADPTEKIE 466
YVPQ+ P PE +P+Q + +PT IE
Sbjct: 1812 YVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIE 1847
>Z75527-2|CAA99775.2| 636|Caenorhabditis elegans Hypothetical
protein C15C8.2 protein.
Length = 636
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 634 HLLPRLPQEASSPVSSY*RQPSSPWAPQLRVLPALVVQERQAFGS 500
H P + SP S +QPSSP P P ++V+++ G+
Sbjct: 430 HTYPTVFSCQDSPPPSEEQQPSSPQTPPFTEQPPMLVEQKPLIGA 474
>Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical
protein F35B12.3 protein.
Length = 248
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 96 VMMSCALLVQAYTYNPYYGNVD 161
+++SC +L AY Y+ YGN D
Sbjct: 7 LVVSCGILAAAYPYSQQYGNYD 28
>AF370361-1|AAK52514.1| 636|Caenorhabditis elegans putative
transcription factor C15C8.2protein.
Length = 636
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 634 HLLPRLPQEASSPVSSY*RQPSSPWAPQLRVLPALVVQERQAFGS 500
H P + SP S +QPSSP P P ++V+++ G+
Sbjct: 430 HTYPTVFSCQDSPPPSEEQQPSSPQTPPFTEQPPMLVEQKPLIGA 474
>AB096001-1|BAE53417.1| 676|Caenorhabditis elegans bHLH-PAS factor
protein.
Length = 676
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 634 HLLPRLPQEASSPVSSY*RQPSSPWAPQLRVLPALVVQERQAFGS 500
H P + SP S +QPSSP P P ++V+++ G+
Sbjct: 430 HTYPTVFSCQDSPPPSEEQQPSSPQTPPFTEQPPMLVEQKPLIGA 474
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 365 PQQENEVYYPQQPENPIFSPTQATELA 445
PQQ+ Y PQQP +PI A +A
Sbjct: 6 PQQQQPGYQPQQPSHPIVGAGAAPTMA 32
>AL132952-4|CAB61136.1| 185|Caenorhabditis elegans Hypothetical
protein Y51H4A.4 protein.
Length = 185
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/104 (22%), Positives = 43/104 (41%)
Frame = +3
Query: 123 QAYTYNPYYGNVDSLSYGSGDSNRGGLVMSRYYNPYYNPRAVGGEWPRSCTASPKPHRRL 302
Q Y NPY +Y + + ++++ PY NP A P S + S +
Sbjct: 25 QMYAQNPYGAGAFDKNYSAATALP---FFAQHFAPYANPHATSSFSPSSSSTSSTTSSQN 81
Query: 303 QRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 434
Q++ + +P+P+P N+K ++ +R +A R
Sbjct: 82 QQSGSSG-SKKKKPVPVP---ENQKDEAYLDRRRRNNEAARKSR 121
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = -1
Query: 673 GRTRMWALWVVRSHLLPRLPQEASSPVSSY*RQPSSPWAPQLRVLPALVVQERQAFGSLG 494
GR R ++++ V S +L S + ++ ++P+ P + V+ +
Sbjct: 151 GRDRAFSMYSVSSDIL-----RVSGYTQQFRSLLTARFSPRRESTPDVTVEAPEDENKND 205
Query: 493 NRYQSGGVQFDLFSGVSQFGRLSGA 419
+RY +GGV+FD + V + G SGA
Sbjct: 206 DRYVNGGVRFD--NDVIEEGTASGA 228
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 281 PEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPT 427
P++ QAPS +Q A T +PQ + P QP + I PT
Sbjct: 121 PQSVQAPSATPAGPLQAMQQAPAPTPGIPQMNQGAHLPPQP-HQIHQPT 168
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +2
Query: 317 YIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKIELYSTTLVPVA 496
Y+ + T D +Y ++ E+ ++PEN P T+L + + + + +
Sbjct: 136 YLQSDEKFTKIDFTYNIEKIEEIIVAEEPENDNIVPKYITKLPPHPKDYQDFVGAVNMLK 195
Query: 497 KATERLPLLNY 529
+A LPL Y
Sbjct: 196 RAQSLLPLAEY 206
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 109 ARYWCKRIPTIPTMETWTPFPTARAIVT 192
A Y CK +P + T TW P P +A T
Sbjct: 12338 ADYICKIVPNVETSRTW-PTPRTKATTT 12364
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 109 ARYWCKRIPTIPTMETWTPFPTARAIVT 192
A Y CK +P + T TW P P +A T
Sbjct: 12338 ADYICKIVPNVETSRTW-PTPRTKATTT 12364
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = -1
Query: 673 GRTRMWALWVVRSHLLPRLPQEASSPVSSY*RQPSSPWAPQLRVLPALVVQERQAFGSLG 494
GR R ++++ V S +L S + ++ ++P+ P + V+ +
Sbjct: 151 GRDRAFSMYSVSSDIL-----RVSGYTQQFRSLLTARFSPRRESTPDVTVEAPEDENKND 205
Query: 493 NRYQSGGVQFDLFSGVSQFGRLSGA 419
+RY +GGV+FD + V + G SGA
Sbjct: 206 DRYVNGGVRFD--NDVIEEGTASGA 228
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,916,014
Number of Sequences: 27780
Number of extensions: 310252
Number of successful extensions: 1123
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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