Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20810
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.0  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   4.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.2  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 708 PFVCEDSDELLNFVRSRNR 764
           P+V   S ELL+F++S NR
Sbjct: 694 PYVGVHSSELLDFLKSGNR 712


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 589 QAQLITEKLLKVTTSPVWRYLTTSIMMALNGT 684
           Q  + TE LLK  +S  +    T I+  ++GT
Sbjct: 83  QGLVSTEMLLKKDSSEAFNEFRTKILAQVHGT 114


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 474 RSQPAKLHLRPEVQM*RMFPRAILCFTNSFS 382
           R    KLHL+      ++ P  +LC+  S+S
Sbjct: 502 RKPTKKLHLKNSPISKKVRPPQVLCYITSWS 532


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 586 RSHRCKTNRPCYVGWWARSWLPNLTRPTVH 497
           R  RC  +RP  +   AR   P    PT H
Sbjct: 181 REERCDPDRPLPLDQKARDLSPRNGSPTDH 210


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -1

Query: 636 RTRRYLEQLLCYQLRL 589
           ++ +YL+Q++C  LRL
Sbjct: 326 QSMKYLDQVVCESLRL 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,213
Number of Sequences: 336
Number of extensions: 4308
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)