BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20810
(768 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form ... 32 2.6
X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for ... 32 2.6
X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mR... 32 2.6
X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein. 32 2.6
M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte... 32 2.6
M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein. 32 2.6
BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein. 32 2.6
AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte ... 32 2.6
AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte ... 32 2.6
AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein. 32 2.6
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 31 4.5
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 31 4.5
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 31 4.5
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 31 4.5
BC093046-1|AAH93046.1| 592|Homo sapiens signal peptide peptidas... 31 4.5
BC080183-1|AAH80183.1| 471|Homo sapiens hypothetical protein LO... 31 4.5
BC028391-1|AAH28391.2| 511|Homo sapiens signal peptide peptidas... 31 4.5
BC007594-1|AAH07594.1| 460|Homo sapiens LOC653319 protein protein. 31 4.5
BC001788-1|AAH01788.1| 117|Homo sapiens SPPL2B protein protein. 31 4.5
AY169315-1|AAO12540.1| 592|Homo sapiens intramembrane protease ... 31 4.5
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 31 4.5
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 31 4.5
AL834156-1|CAD38862.1| 468|Homo sapiens hypothetical protein pr... 31 4.5
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 31 4.5
AJ420897-1|CAD13134.1| 564|Homo sapiens SPPL2b protein protein. 31 4.5
AJ345027-1|CAC87788.1| 592|Homo sapiens presenilin-like protein... 31 4.5
AB040965-1|BAA96056.1| 601|Homo sapiens KIAA1532 protein protein. 31 4.5
BC041414-1|AAH41414.1| 320|Homo sapiens chromosome 10 open read... 30 7.9
AL157935-16|CAI12618.1| 380|Homo sapiens family with sequence s... 30 7.9
AL157935-15|CAM14149.1| 242|Homo sapiens family with sequence s... 30 7.9
AK074108-1|BAB84934.1| 194|Homo sapiens FLJ00179 protein protein. 30 7.9
AF016709-1|AAC51931.1| 422|Homo sapiens ATP receptor subunit pr... 30 7.9
>X17519-2|CAB43537.1| 363|Homo sapiens Leu-8 antigen short form
protein.
Length = 363
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>X17519-1|CAB43536.1| 385|Homo sapiens protein ( Human mRNA for
Leu-8 pan leukocyte antigen. ).
Length = 385
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>X16150-1|CAA34275.1| 372|Homo sapiens protein ( Human Lyam-1 mRNA
for leukocyte adhesion molecule-1. ).
Length = 372
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>X16070-1|CAA34203.1| 372|Homo sapiens pln homing receptor protein.
Length = 372
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>M32414-1|AAB60700.1| 372|Homo sapiens protein ( Human leukocyte
adhesion molecule-1 (LAM-1), exon 9. ).
Length = 372
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>M25280-1|AAC63053.1| 372|Homo sapiens LNHR protein.
Length = 372
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>BC020758-1|AAH20758.1| 375|Homo sapiens SELL protein protein.
Length = 375
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>AY233976-1|AAO48272.1| 372|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 372
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 124 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 155
>AL021940-1|CAI19356.1| 385|Homo sapiens selectin L (lymphocyte
adhesion molecule 1) protein.
Length = 385
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>AJ246000-1|CAB55488.1| 385|Homo sapiens L-selectin protein.
Length = 385
Score = 31.9 bits (69), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 624 NDESCLAILNNFYNDGIKWHDVACHHVKPFVC 719
N E C+ I D KW+D ACH +K +C
Sbjct: 137 NKEDCVEIYIKRNKDAGKWNDDACHKLKAALC 168
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +3
Query: 579 WLRSSAADNREAAQGNDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 722
W + R + D C+ I+ N+ KW D C + ++C+
Sbjct: 1033 WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +3
Query: 579 WLRSSAADNREAAQGNDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 722
W + R + D C+ I+ N+ KW D C + ++C+
Sbjct: 1033 WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +3
Query: 579 WLRSSAADNREAAQGNDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 722
W + R + D C+ I+ N+ KW D C + ++C+
Sbjct: 1033 WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +3
Query: 579 WLRSSAADNREAAQGNDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 722
W + R + D C+ I+ N+ KW D C + ++C+
Sbjct: 1033 WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>BC093046-1|AAH93046.1| 592|Homo sapiens signal peptide
peptidase-like 2B protein.
Length = 592
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 495 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 373
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>BC080183-1|AAH80183.1| 471|Homo sapiens hypothetical protein
LOC653319 protein.
Length = 471
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 554 LRWVVGPILAPEPDQTNRSHLEAVGHRGHSRRN 456
L V P L P+P+Q S + +GHRGH RR+
Sbjct: 49 LALAVPPALQPQPEQQPFSQM-LLGHRGHMRRS 80
>BC028391-1|AAH28391.2| 511|Homo sapiens signal peptide
peptidase-like 2B protein.
Length = 511
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 495 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 373
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>BC007594-1|AAH07594.1| 460|Homo sapiens LOC653319 protein protein.
Length = 460
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 554 LRWVVGPILAPEPDQTNRSHLEAVGHRGHSRRN 456
L V P L P+P+Q S + +GHRGH RR+
Sbjct: 38 LALAVPPALQPQPEQQPFSQM-LLGHRGHMRRS 69
>BC001788-1|AAH01788.1| 117|Homo sapiens SPPL2B protein protein.
Length = 117
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 495 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 373
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 74 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 111
>AY169315-1|AAO12540.1| 592|Homo sapiens intramembrane protease
protein.
Length = 592
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 495 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 373
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +3
Query: 579 WLRSSAADNREAAQGNDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 722
W + R + D C+ I+ N+ KW D C + ++C+
Sbjct: 1033 WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +3
Query: 579 WLRSSAADNREAAQGNDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 722
W + R + D C+ I+ N+ KW D C + ++C+
Sbjct: 1033 WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AL834156-1|CAD38862.1| 468|Homo sapiens hypothetical protein
protein.
Length = 468
Score = 31.1 bits (67), Expect = 4.5
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 554 LRWVVGPILAPEPDQTNRSHLEAVGHRGHSRRN 456
L V P L P+P+Q S + +GHRGH RR+
Sbjct: 49 LALAVPPALQPQPEQQPFSQM-LLGHRGHMRRS 80
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 31.1 bits (67), Expect = 4.5
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +3
Query: 579 WLRSSAADNREAAQGNDESCLAILNNFYNDGIKWHDVACHHVKPFVCE 722
W + R + D C+ I+ N+ KW D C + ++C+
Sbjct: 1033 WGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQ 1080
>AJ420897-1|CAD13134.1| 564|Homo sapiens SPPL2b protein protein.
Length = 564
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 495 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 373
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 248 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 285
>AJ345027-1|CAC87788.1| 592|Homo sapiens presenilin-like protein 1
protein.
Length = 592
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 495 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 373
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 276 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 313
>AB040965-1|BAA96056.1| 601|Homo sapiens KIAA1532 protein protein.
Length = 601
Score = 31.1 bits (67), Expect = 4.5
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -1
Query: 495 FGGCRSPRSQPAKLHLRPEVQM*RMFPRAILCFTNSFSWGV 373
FG CR P + H RP+ RM A+ C S WGV
Sbjct: 285 FGKCRIPNNSLPYFHKRPQA---RMLLLALFCVAVSVVWGV 322
>BC041414-1|AAH41414.1| 320|Homo sapiens chromosome 10 open reading
frame 72 protein.
Length = 320
Score = 30.3 bits (65), Expect = 7.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 311 KWIGWTQGTSAADCMDAVSLETPQENEFVKQR 406
KW W+ G+SA + M +SL+ +E+ F K +
Sbjct: 138 KWTAWSNGSSATE-MRVISLKASEESSFEKTK 168
>AL157935-16|CAI12618.1| 380|Homo sapiens family with sequence
similarity 102, member A protein.
Length = 380
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2
Query: 530 LAPEPDQTNRSHLEAVGHRGHSRRNYIYDQKSKCNVCFRERS 405
L EPDQ N S E V H GHSR + Q+SK + E S
Sbjct: 203 LPEEPDQ-NLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHS 243
>AL157935-15|CAM14149.1| 242|Homo sapiens family with sequence
similarity 102, member A protein.
Length = 242
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2
Query: 530 LAPEPDQTNRSHLEAVGHRGHSRRNYIYDQKSKCNVCFRERS 405
L EPDQ N S E V H GHSR + Q+SK + E S
Sbjct: 65 LPEEPDQ-NLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHS 105
>AK074108-1|BAB84934.1| 194|Homo sapiens FLJ00179 protein protein.
Length = 194
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = -2
Query: 530 LAPEPDQTNRSHLEAVGHRGHSRRNYIYDQKSKCNVCFRERS 405
L EPDQ N S E V H GHSR + Q+SK + E S
Sbjct: 31 LPEEPDQ-NLSSPEEVFHSGHSRNSSYASQQSKISGYSTEHS 71
>AF016709-1|AAC51931.1| 422|Homo sapiens ATP receptor subunit
protein.
Length = 422
Score = 30.3 bits (65), Expect = 7.9
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -3
Query: 160 REQNCCRQAKVPAHLCSVDEDCETRMRVLAENGY-GGRVLL*CNLYAMNDCE 8
R+ C +P CS D DC V A NG GR L NL A CE
Sbjct: 114 RQNVCAENEGIPDGACSKDSDCHAGEAVTAGNGVKTGRCLRRGNL-ARGTCE 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,153,649
Number of Sequences: 237096
Number of extensions: 2901310
Number of successful extensions: 7497
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 6976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7497
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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