Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20810
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 31 0.68
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 30 2.1
Z46934-4|CAA87042.3| 519|Caenorhabditis elegans Hypothetical pr... 29 3.6
U88169-11|AAB42238.2| 308|Caenorhabditis elegans C-type lectin ... 29 4.8
U41276-2|AAA82471.1| 82|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 28 8.4
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 28 8.4
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 28 8.4
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 28 8.4
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 28 8.4
AY390553-1|AAQ94965.1| 239|Caenorhabditis elegans SMA-9 protein. 28 8.4
AY390541-1|AAQ94953.1| 521|Caenorhabditis elegans SMA-9 class I... 28 8.4
AY390540-1|AAQ94952.1| 405|Caenorhabditis elegans SMA-9 class I... 28 8.4
AY390539-1|AAQ94951.1| 465|Caenorhabditis elegans SMA-9 class I... 28 8.4
AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class I... 28 8.4
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 163 CREQNCCRQAKVPAHLCSVDE-DCETRMRVLAENGYGGRVLL*CNLYAMNDC 11
C EQ C+QAK H+C +C M L ENG R+ C++ +C
Sbjct: 359 CPEQYMCQQAKNLEHICCTKPLNCPAGMDALRENGGRPRI---CSMGVDGNC 407
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWSGQVREPRSGPPPNVTR 559
WT+G +G RG Q P + GW+ SG T+
Sbjct: 649 WTNGANGTTSGTSRGFTQRPTIAGWTNGANGTTSGTSRGFTQ 690
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWSGQVREPRSGPPPNVTR 559
WT+G +G RG Q P + GW+ SG T+
Sbjct: 799 WTNGANGTTSGTSRGFTQRPTIAGWTNGANGTTSGTSRGFTQ 840
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWSGQVREPRSGPPPNVTR 559
WT+G +G RG Q P GW+ SG T+
Sbjct: 673 WTNGANGTTSGTSRGFTQRPTTAGWTNGANGTTSGTSRGFTQ 714
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWSGQVREPRSGPPPNVTR 559
WT+G +G RG Q P GW+ SG T+
Sbjct: 697 WTNGANGTTSGTSRGFTQRPTTAGWTNGANGTTSGTSRGFTQ 738
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWSGQVREPRSG 538
WT+G +G RG Q P GW+ SG
Sbjct: 901 WTNGANGTTSGTSRGFTQRPTAAGWTNGANGTTSG 935
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWSGQVREPRSG 538
WT+G +G RG Q P GW+ SG
Sbjct: 925 WTNGANGTTSGTSRGFAQRPTAAGWTNGANGTTSG 959
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWS 511
WT+G +G RG Q P + GW+
Sbjct: 475 WTNGANGTTSGTSRGFTQRPTIAGWT 500
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWS 511
WT+G +G RG Q P + GW+
Sbjct: 523 WTNGANGTTSGTSRGFTQRPTIAGWT 548
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWS 511
WT+G +G RG Q P + GW+
Sbjct: 601 WTNGANGTTSGTSRGFTQRPTIAGWT 626
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 434 WTSGRKCNFAGCDRGDLQPPNVNGWS 511
WT+G +G RG Q P + GW+
Sbjct: 721 WTNGANGTTSGTSRGFTQRPTIAGWT 746
>Z46934-4|CAA87042.3| 519|Caenorhabditis elegans Hypothetical
protein ZK1320.4 protein.
Length = 519
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 547 QRNTGDWSYTGGYGQAQLITEKLL 618
Q N GD+S T YG QL T++++
Sbjct: 294 QENNGDFSKTSSYGNRQLTTQEIV 317
>U88169-11|AAB42238.2| 308|Caenorhabditis elegans C-type lectin
protein 53 protein.
Length = 308
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 419 NIRYIWTSGRKCNFAGCDRGDLQPPNVNGWSGQVREPRSGPPPNVTR 559
N ++ WT G N+ G+ N W+ V +P G TR
Sbjct: 242 NSKWQWTDGSVVNYVNWGDGEPNNMNKEWWTALVADPHEGKNSEGTR 288
>U41276-2|AAA82471.1| 82|Caenorhabditis elegans Hypothetical
protein C52B11.4 protein.
Length = 82
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +2
Query: 395 VKQRIARGNIRYIWTSGRK-----CNFAGCDRGDLQPPNVNG 505
V Q++ N+R+IW +GRK N C PPN G
Sbjct: 30 VDQKLNNRNLRFIWLNGRKGKERAANCHCCKTTQASPPNHAG 71
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -2
Query: 485 VGHRGHSRRNYIYDQ--KSKCNVCFRERSFAL-QIRFPGVFLRKQRPCNLRQMFLASSQS 315
+G GHS Q SKC C RE +FA+ I + + L K +QS
Sbjct: 25 IGTCGHSICESCKHQMVSSKCPQCNREEAFAITTINYQVLELIKHFKSMQSGGVAPQAQS 84
Query: 314 TSKLRVGACSQ 282
T+ L G CS+
Sbjct: 85 TNSLDEGTCSE 95
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 1901 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 1951
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 1883 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 1933
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 1936 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 1986
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 1969 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 2019
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 1527 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 1577
>AY390553-1|AAQ94965.1| 239|Caenorhabditis elegans SMA-9 protein.
Length = 239
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 74 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 124
>AY390541-1|AAQ94953.1| 521|Caenorhabditis elegans SMA-9 class Ib
protein.
Length = 521
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 356 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 406
>AY390540-1|AAQ94952.1| 405|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 405
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 240 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 290
>AY390539-1|AAQ94951.1| 465|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 465
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 300 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 350
>AY390538-1|AAQ94950.1| 591|Caenorhabditis elegans SMA-9 class Ia
protein.
Length = 591
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 536 PILAPEPDQTNRSHL-EAVGHRGHSRRNYIYDQKSKCNVCFRERSFALQIR 387
P A P T+++H E++ R H++R +KC +C E S ++++
Sbjct: 426 PKAALHPLSTDKAHASESLSDRLHNKRPRPIPDNTKCQICADEFSTPIELQ 476
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,255,364
Number of Sequences: 27780
Number of extensions: 440654
Number of successful extensions: 1283
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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