Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20808
(777 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 25 0.89
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 25 0.89
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 24 1.2
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 24 1.2
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 4.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 4.8
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 22 4.8
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 8.3
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 8.3
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 8.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.3
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 24.6 bits (51), Expect = 0.89
Identities = 10/28 (35%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +3
Query: 3 LFLLMLTYFLNIIL-KQVRSFTRVLAKV 83
+ L+ LTYF NI+ K++ + ++L+K+
Sbjct: 79 VLLVFLTYFFNILFRKKLLNAVKILSKI 106
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 24.6 bits (51), Expect = 0.89
Identities = 10/28 (35%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +3
Query: 3 LFLLMLTYFLNIIL-KQVRSFTRVLAKV 83
+ L+ LTYF NI+ K++ + ++L+K+
Sbjct: 75 VLLVFLTYFFNILFRKKLLNAVKILSKI 102
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 614 KRQEYLHLLHVFFLPVYLRCQFYL*FST*KLSFKFPFSPT 495
K + + H +H +F+ FY+ FS+ FK PF T
Sbjct: 18 KEKRFPHRIHSYFMVA-----FYVVFSSVSTFFKIPFYST 52
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 614 KRQEYLHLLHVFFLPVYLRCQFYL*FST*KLSFKFPFSPT 495
K + + H +H +F+ FY+ FS+ FK PF T
Sbjct: 18 KEKRFPHRIHSYFMVA-----FYVVFSSVSTFFKIPFYST 52
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 22.2 bits (45), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 155 SFIMTLTIRKLLDANYSKLV 214
SFI LT RKLL A Y V
Sbjct: 372 SFINNLTDRKLLSAWYMNTV 391
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 22.2 bits (45), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 155 SFIMTLTIRKLLDANYSKLV 214
SFI LT RKLL A Y V
Sbjct: 264 SFINNLTDRKLLSAWYMNTV 283
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 22.2 bits (45), Expect = 4.8
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -3
Query: 616 KKGRNTCTSCTYSFCQC 566
+KG+ TC + + ++C C
Sbjct: 34 QKGQKTCLNLSINYCIC 50
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.4 bits (43), Expect = 8.3
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 304 DVSDGS-KLLVGGFGLCGIPENLIKALNIKKVSALTVVSNNAGVED 438
D S+G+ K + + +NI+K TVV GVE+
Sbjct: 122 DASNGNLKFSIDNILKADFGRRITDPINIRKCKPKTVVPEVGGVEE 167
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 691 VPGTSIQLCAG 723
+PG SIQ+C G
Sbjct: 171 IPGPSIQVCEG 181
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 691 VPGTSIQLCAG 723
+PG SIQ+C G
Sbjct: 171 IPGPSIQVCEG 181
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 546 VELTPQVHWQKEYVQ 590
+E T +VH KEY+Q
Sbjct: 1308 IEETSEVHISKEYLQ 1322
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 546 VELTPQVHWQKEYVQ 590
+E T +VH KEY+Q
Sbjct: 1308 IEETSEVHISKEYLQ 1322
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,070
Number of Sequences: 336
Number of extensions: 3899
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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