Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20806
(673 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2ASU0 Cluster: Novel protein; n=23; Danio rerio|Rep: N... 36 1.2
UniRef50_UPI0000F20ED8 Cluster: PREDICTED: hypothetical protein;... 35 2.1
UniRef50_A2AST9 Cluster: Novel protein; n=6; Danio rerio|Rep: No... 35 2.1
UniRef50_Q21M13 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_A2RP89 Cluster: Putative ankyrin repeat protein; n=1; S... 35 2.1
UniRef50_UPI0000F20E85 Cluster: PREDICTED: hypothetical protein;... 34 2.7
UniRef50_UPI0000F20E5E Cluster: PREDICTED: hypothetical protein;... 34 2.7
UniRef50_UPI0000F21FF9 Cluster: PREDICTED: hypothetical protein;... 34 3.6
UniRef50_Q54ZM2 Cluster: Putative uncharacterized protein; n=2; ... 33 8.3
UniRef50_Q2UGG3 Cluster: ATP-dependent DNA helicase; n=3; Euroti... 33 8.3
UniRef50_Q6KZ12 Cluster: Putative uncharacterized protein; n=1; ... 33 8.3
UniRef50_A4FXJ4 Cluster: Type I site-specific deoxyribonuclease,... 33 8.3
>UniRef50_A2ASU0 Cluster: Novel protein; n=23; Danio rerio|Rep:
Novel protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 199
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 61 ISVYKGSFRISYIVYNCALCPNCNVT*TFVCTLINVFVTSLSWL--HIVFSTISVENLNS 234
+SVY + + ++ + C + VC+++NV SLSW + V S+ISV +L+
Sbjct: 100 VSVY-ARLPVPVLTFSSSQCSPSQYNCSVVCSVVNVSAVSLSWYKGNSVLSSISVSDLSI 158
Query: 235 EISL 246
+SL
Sbjct: 159 SLSL 162
>UniRef50_UPI0000F20ED8 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 280
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +1
Query: 148 VCTLINVFVTSLSWL--HIVFSTISVENLNSEISL 246
+C+++NV SLSW + + S+ISV NL+S ISL
Sbjct: 141 LCSVVNVSAVSLSWYKGNSLLSSISVSNLSSSISL 175
>UniRef50_A2AST9 Cluster: Novel protein; n=6; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 190
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 61 ISVYKGSFRISYIVYNCALCPNCNVT*TFVCTLINVFVTSLSWL--HIVFSTISVENLNS 234
+SVY + ++ + + C + + VC+++NV SLSW + V S ISV +L+
Sbjct: 100 VSVY-ARLPVPVLICSSSQCSSSQYNCSVVCSVMNVSAVSLSWYKGNSVLSNISVSDLSI 158
Query: 235 EISL 246
+SL
Sbjct: 159 SLSL 162
>UniRef50_Q21M13 Cluster: Putative uncharacterized protein; n=1;
Saccharophagus degradans 2-40|Rep: Putative
uncharacterized protein - Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024)
Length = 290
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 302 SSLNKTVIPLNIILYISW-HRDISEFKFSTEIVENTICSHDKDVTKTLIKVHTNVY 138
++LN+T++ N YI + H+D SE +F + IV+ T C D+ + N +
Sbjct: 131 ATLNRTILVENPSTYIDFEHQDFSEPEFLSAIVKQTSCGLLLDINNIFVSASNNTF 186
>UniRef50_A2RP89 Cluster: Putative ankyrin repeat protein; n=1;
Salmonella enterica subsp. enterica serovar Typhi|Rep:
Putative ankyrin repeat protein - Salmonella enterica
subsp. enterica serovar Typhi
Length = 236
Score = 34.7 bits (76), Expect = 2.1
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 220 ENLNSEISLCQLIYKIIFNGMTVLFKLECPNRPFIKSFLGSFKLHHF 360
+N++SE+SL L Y +I +G+ V K+E N P IK FL +K F
Sbjct: 43 KNIDSEVSLSLLQY-LIDHGVNVNHKIEESNSPLIKVFLYQWKNSEF 88
>UniRef50_UPI0000F20E85 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 274
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Frame = +1
Query: 148 VCTLINVFVTSLSWL--HIVFSTISVENLNSEISL 246
VC+++NV SLSW + V S+I+V +LN ISL
Sbjct: 168 VCSVVNVRAVSLSWYKGNTVLSSINVSDLNKSISL 202
>UniRef50_UPI0000F20E5E Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 370
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 142 TFVCTLINVFVTSLSWL--HIVFSTISVENLNSEISL 246
+ VC+++NV SLSW + V S ISV +L+S +SL
Sbjct: 142 SLVCSVVNVSAVSLSWYKGNSVLSKISVSDLSSSVSL 178
>UniRef50_UPI0000F21FF9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 264
Score = 33.9 bits (74), Expect = 3.6
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 145 FVCTLINVFVTSLSWL--HIVFSTISVENLNSEISL 246
F+C ++NV SLSW + V S+ISV NL+ +SL
Sbjct: 146 FLCLVLNVSAVSLSWYKENSVLSSISVSNLSISLSL 181
>UniRef50_Q54ZM2 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 636
Score = 32.7 bits (71), Expect = 8.3
Identities = 20/93 (21%), Positives = 40/93 (43%)
Frame = +1
Query: 157 LINVFVTSLSWLHIVFSTISVENLNSEISLCQLIYKIIFNGMTVLFKLECPNRPFIKSFL 336
L+ + SL W++ +S + +++N I+ C L ++ N +T + I L
Sbjct: 316 LVAALIGSLHWIYNCWSEVPQDDINRSIAECALSCRVAMNSVTTHTPFQLGVLTNIAKLL 375
Query: 337 GSFKLHHFVNQPSSGAKSDNSITTCHIICSFIK 435
+ F+ + AK + +C +I S K
Sbjct: 376 KNISTKVFITRTPEDAKKLSD--SCFVISSTFK 406
>UniRef50_Q2UGG3 Cluster: ATP-dependent DNA helicase; n=3;
Eurotiomycetidae|Rep: ATP-dependent DNA helicase -
Aspergillus oryzae
Length = 539
Score = 32.7 bits (71), Expect = 8.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 322 IKSFLGSFKLHHFVNQ-PSSGAKSDNSITTCHIICSFIKKDTQG 450
IK F G +L +Q PSS K+ +S + C C F K+ +G
Sbjct: 458 IKDFFGDLELERMGSQAPSSEMKTGSSASPCDFACDFCKEGPRG 501
>UniRef50_Q6KZ12 Cluster: Putative uncharacterized protein; n=1;
Picrophilus torridus|Rep: Putative uncharacterized
protein - Picrophilus torridus
Length = 136
Score = 32.7 bits (71), Expect = 8.3
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -2
Query: 654 SKFFFRYAVYLVRYSIFLLFKIKNLVLFILTE--SSNSITEHTYSI 523
SKF ++ VYL+ SI++ FKIKN V TE +SI + Y +
Sbjct: 25 SKFSYKNNVYLLNDSIYIDFKIKNPVYIEFTEHIDIDSIEDEFYEL 70
>UniRef50_A4FXJ4 Cluster: Type I site-specific deoxyribonuclease,
HsdR family; n=3; cellular organisms|Rep: Type I
site-specific deoxyribonuclease, HsdR family -
Methanococcus maripaludis
Length = 1024
Score = 32.7 bits (71), Expect = 8.3
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -3
Query: 230 FKFSTEIVENTICSHDKDVTKTLIKVHTNVYVTLQLGHN 114
+KFS + +EN I D +T+ LIK + +VY L LG++
Sbjct: 66 YKFSEKSIENAIADLDVPLTEGLIKSNEHVYDQLILGNS 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,398,805
Number of Sequences: 1657284
Number of extensions: 14135720
Number of successful extensions: 31175
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31135
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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