Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20806
         (673 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D32143-1|BAA06874.1|  206|Homo sapiens biliverdin-IXbeta reducta...    30   6.6  
D26308-1|BAA05370.1|  206|Homo sapiens NADPH-flavin reductase pr...    30   6.6  
BC109371-1|AAI09372.1|  206|Homo sapiens biliverdin reductase B ...    30   6.6  
AY340485-1|AAP88933.1|  206|Homo sapiens biliverdin reductase B ...    30   6.6  

>D32143-1|BAA06874.1|  206|Homo sapiens biliverdin-IXbeta reductase
           I protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 542 RNIPIPSRTYVLDACFCSFNAVYLWPCSKYPPCVSFLINEHIIWHVVIELS 390
           RNI    + + +D      +A  LW  +K PP +  + ++HI  H V+  S
Sbjct: 92  RNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRES 142


>D26308-1|BAA05370.1|  206|Homo sapiens NADPH-flavin reductase
           protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 542 RNIPIPSRTYVLDACFCSFNAVYLWPCSKYPPCVSFLINEHIIWHVVIELS 390
           RNI    + + +D      +A  LW  +K PP +  + ++HI  H V+  S
Sbjct: 92  RNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRES 142


>BC109371-1|AAI09372.1|  206|Homo sapiens biliverdin reductase B
           (flavin reductase (NADPH)) protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 542 RNIPIPSRTYVLDACFCSFNAVYLWPCSKYPPCVSFLINEHIIWHVVIELS 390
           RNI    + + +D      +A  LW  +K PP +  + ++HI  H V+  S
Sbjct: 92  RNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRES 142


>AY340485-1|AAP88933.1|  206|Homo sapiens biliverdin reductase B
           (flavin reductase (NADPH)) protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 542 RNIPIPSRTYVLDACFCSFNAVYLWPCSKYPPCVSFLINEHIIWHVVIELS 390
           RNI    + + +D      +A  LW  +K PP +  + ++HI  H V+  S
Sbjct: 92  RNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRES 142


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,058,679
Number of Sequences: 237096
Number of extensions: 2146303
Number of successful extensions: 3419
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3419
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)