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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20805
         (773 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   174   1e-44
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...   111   1e-25
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...   110   2e-25
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...    95   1e-20
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    63   4e-11
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    59   8e-10
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po...    57   2e-09
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    52   1e-07
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    38   0.002
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce...    32   0.10 
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb...    31   0.24 
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p...    29   0.56 
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    27   3.0  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   3.0  
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    27   3.9  
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    26   5.2  
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur...    26   5.2  
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|...    26   5.2  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    26   5.2  
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    26   6.9  
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos...    25   9.1  
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    25   9.1  
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc...    25   9.1  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  174 bits (423), Expect = 1e-44
 Identities = 78/84 (92%), Positives = 80/84 (95%)
 Frame = +2

Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
           DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+N
Sbjct: 56  DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSN 115

Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
           REKMTQI+FETFN PA YVAIQAV
Sbjct: 116 REKMTQIIFETFNAPAFYVAIQAV 139



 Score =  172 bits (418), Expect = 5e-44
 Identities = 80/88 (90%), Positives = 87/88 (98%)
 Frame = +1

Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
           +SLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+
Sbjct: 140 LSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYT 199

Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
           F+TTAEREIVRDIKEKLCYVALDFE++L
Sbjct: 200 FSTTAEREIVRDIKEKLCYVALDFEQEL 227



 Score =  110 bits (265), Expect = 2e-25
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = +3

Query: 96  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
           +EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYV
Sbjct: 2   EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYV 54


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score =  111 bits (267), Expect = 1e-25
 Identities = 48/88 (54%), Positives = 70/88 (79%)
 Frame = +1

Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
           ++LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GRD+TDYL   L + G+ 
Sbjct: 145 LALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHE 204

Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
             ++AE+EIVR+IKEK CYVA DF  ++
Sbjct: 205 LVSSAEKEIVREIKEKCCYVASDFRSEI 232



 Score = 91.1 bits (216), Expect = 2e-19
 Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
 Frame = +2

Query: 260 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKAN 436
           EAQ+ RG+L ++ PIE GI+ NW DME+IW + + ++ L   PEEHP+LLTE PL    N
Sbjct: 61  EAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRN 120

Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
           +EK+ +  +ET N PA+  ++Q V
Sbjct: 121 KEKIAEYFYETLNVPALSFSLQPV 144



 Score = 61.3 bits (142), Expect = 1e-10
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+ VM    QKD +V
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFV 58


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score =  110 bits (264), Expect = 2e-25
 Identities = 48/85 (56%), Positives = 65/85 (76%)
 Frame = +1

Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
           +SLYA G ++G+V+DSGDGV+H VP+YE   L H + RLD+AGRD T YL+ +L  +GY+
Sbjct: 140 LSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYA 199

Query: 688 FTTTAEREIVRDIKEKLCYVALDFE 762
           F  TA+ E VR++KEKLCYV+ D E
Sbjct: 200 FNRTADFETVREMKEKLCYVSYDLE 224



 Score = 99.5 bits (237), Expect = 5e-22
 Identities = 41/97 (42%), Positives = 68/97 (70%)
 Frame = +2

Query: 218 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 397
           + G    + ++  DEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P    
Sbjct: 43  KTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRK 102

Query: 398 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 508
           +LLTE P+NP ANREKM + MFE +    +YVAIQAV
Sbjct: 103 ILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAV 139



 Score = 48.0 bits (109), Expect = 1e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = +3

Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
           E A +V+DNG+G  K G+A D+ PR  FPSIVGRP
Sbjct: 2   ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRP 36


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 95.1 bits (226), Expect = 1e-20
 Identities = 39/74 (52%), Positives = 50/74 (67%)
 Frame = +2

Query: 287 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 466
           +L YPI HG + NWD ME+ W  + +  LR  PE+H  LLTE PLNP  NRE   +IMFE
Sbjct: 89  SLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFE 148

Query: 467 TFNTPAMYVAIQAV 508
           +FN   +Y+A+QAV
Sbjct: 149 SFNCAGLYIAVQAV 162



 Score = 65.7 bits (153), Expect = 7e-12
 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = +1

Query: 535 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAER 708
           TG V+DSGDGV+H +P+ EGY +  +I  + LAGRD+T ++  +L +R    S   TAER
Sbjct: 180 TGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER 239

Query: 709 EIVRDIKEKLCYVALDFERK 768
                IKE+ CYV  D  ++
Sbjct: 240 -----IKEECCYVCPDIVKE 254



 Score = 42.3 bits (95), Expect = 7e-05
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
 Frame = +3

Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKDSYV 254
           +++DNG+G  K G+AG+DAP  VFP+++   R  G   G  +  K SY+
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYM 55


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = +2

Query: 284 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 463
           + +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K  + MF
Sbjct: 63  MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122

Query: 464 ETFNTPAMYVAIQ 502
           E+   PA Y+A Q
Sbjct: 123 ESLRCPATYLAKQ 135



 Score = 40.3 bits (90), Expect = 3e-04
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +3

Query: 99  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 200
           +EV+A+V+D GS   + GF+G+D P+ V PS  G
Sbjct: 9   DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42



 Score = 30.7 bits (66), Expect = 0.24
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +1

Query: 517 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 684
           +ASG+ T  ++D G   S    IY+G+ L         +G  + D L + L ++ +
Sbjct: 141 FASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKNF 196


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 58.8 bits (136), Expect = 8e-10
 Identities = 25/70 (35%), Positives = 42/70 (60%)
 Frame = +2

Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 478
           P E  +++NWD ME++  +TF  +L +   EHP+ +TE   NP   R  MT+++FE +N 
Sbjct: 86  PFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNA 144

Query: 479 PAMYVAIQAV 508
           P++   I  +
Sbjct: 145 PSVAYGIDGL 154



 Score = 37.1 bits (82), Expect = 0.003
 Identities = 19/76 (25%), Positives = 35/76 (46%)
 Frame = +1

Query: 532 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 711
           ++GIVL+ G+  SH +P+  G  +     R+   G   + YL+K+   +  SF       
Sbjct: 165 SSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPS 224

Query: 712 IVRDIKEKLCYVALDF 759
               +    C+V+ D+
Sbjct: 225 QAELLMHDHCHVSSDY 240



 Score = 35.9 bits (79), Expect = 0.006
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 209
           LV+DNGS   +AG+ G+  P+ VF ++V R R
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58


>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 401

 Score = 57.2 bits (132), Expect = 2e-09
 Identities = 26/77 (33%), Positives = 48/77 (62%)
 Frame = +1

Query: 541 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 720
           +V+DSG   +H +P+ +      A+ R+D+ G+ LT+YL ++++ R Y+     E  IV 
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216

Query: 721 DIKEKLCYVALDFERKL 771
           +IKE +CYV+ +F+  +
Sbjct: 217 EIKESVCYVSQNFKEDM 233


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 21/67 (31%), Positives = 39/67 (58%)
 Frame = +2

Query: 308 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 487
           +GI+ +W+     W      +L+V P E+ +++TE   NP++ R+++ +  FE  + PA 
Sbjct: 74  NGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAF 133

Query: 488 YVAIQAV 508
           Y+  QAV
Sbjct: 134 YLTKQAV 140



 Score = 36.7 bits (81), Expect = 0.004
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +3

Query: 99  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 200
           EE+ +LV+D GS   + G+AG+++P  + PS  G
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = +1

Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
           + LYA G   G+V+D G   +   PI +G  +  A  +L L GR +T +L  +L E   +
Sbjct: 186 MGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYMTQHLQNLLRESLPT 245

Query: 688 FTTTAEREIVRDIKE 732
             ++ +     DI E
Sbjct: 246 LKSSGQYVSKEDITE 260



 Score = 34.7 bits (76), Expect = 0.015
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
 Frame = +2

Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 466
           PI+ G V +W+ ++  W H  Y+ L   P +    +PV L         +RE  TQ  FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171

Query: 467 TFNTPAMYVAIQ 502
               P   +A +
Sbjct: 172 ECQVPGFTIAYE 183


>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1666

 Score = 31.9 bits (69), Expect = 0.10
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
 Frame = +2

Query: 359  FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 502
            +Y  L    E+HP+LLT+  A L P+ +  ++ +I  ++ NTP +    VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451


>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 30.7 bits (66), Expect = 0.24
 Identities = 13/58 (22%), Positives = 30/58 (51%)
 Frame = +1

Query: 517 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 690
           + +G +   V+D G   +    + EG  +P++ ++++  G D+T   MK+L    + +
Sbjct: 286 FGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMRSHFPY 343


>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 277

 Score = 29.5 bits (63), Expect = 0.56
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = -2

Query: 331 IPVSDDSVFDGVFEGQDTSFALCLIST*ESFCPIPTITP*WRGLPTIEGNTARGASSPAK 152
           +P  + +V        +TSFAL   S   S    PT +      P +E +    +S+PA 
Sbjct: 63  LPTQEAAVETNASASHETSFALPTTSPAASLSISPTKSAAVSSEPNVEADVKSLSSTPAA 122

Query: 151 PALHIP 134
           P L+ P
Sbjct: 123 PQLNSP 128


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = -2

Query: 253 T*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 95
           T  S  P+ PT+ P     P    N     S P         PL+TTN  TS+S
Sbjct: 402 TGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 524  PVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 616
            P VP  S   P+   P P PS++    P PS
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 533 PPVSCWTPATVSPTPCPSTKDTHSP 607
           PPV+C TP    P  C   K  H P
Sbjct: 631 PPVACGTPIPDCPYLCVLPKSCHHP 655


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 26.2 bits (55), Expect = 5.2
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 401 LLTEAPLNPKANREKMTQIMFETFN 475
           +L  APL+ +   +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205


>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
           deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 398

 Score = 26.2 bits (55), Expect = 5.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 506 VSRCTRPVVPPVSCWTPATVSPTPCPST 589
           VSR T+P+    S  +P  VSP   PST
Sbjct: 263 VSRLTQPLPSLASTASPQQVSPPAAPST 290


>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 194

 Score = 26.2 bits (55), Expect = 5.2
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = +3

Query: 519 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPH 671
           R RS HR+  G  RR  P+R HL R     RH  +     R  R      H
Sbjct: 142 RTRSNHRH--GSHRRHEPYRTHLSRHH---RHSTTNYHSKRDDRYERRREH 187


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 26.2 bits (55), Expect = 5.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 235 PIPTITP*WRGLPTIEGNTARGASSPAKPAL 143
           P+PT  P    LPT   NT +    P+ PAL
Sbjct: 74  PVPTGAP---SLPTSSNNTQQAEERPSMPAL 101


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 25.8 bits (54), Expect = 6.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 255 LHKSPSVPYRPSRPDGGAFPRSRGTR 178
           + K+PS PY  SRP   A   S  TR
Sbjct: 310 ISKAPSYPYSSSRPSASASLASSPTR 335


>SPAC664.03 |||RNA polymerase II associated Paf1 complex
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 457

 Score = 25.4 bits (53), Expect = 9.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 567 DTVAGVQHDTGGTTGRVQRDTAWMATYMAGV 475
           D   G+  D  G TG  + DT+WM + ++ V
Sbjct: 58  DIELGMPLDLAGITGFFEGDTSWMHSDLSSV 88


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 25.4 bits (53), Expect = 9.1
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +2

Query: 464 ETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTPCPSTKDT 598
           +T    ++   +   +  T P     S  TPA V P P PST  T
Sbjct: 815 KTSQASSILPTVPRTTSYTSPYATTSSHITPADVHPLPPPSTSTT 859


>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 721

 Score = 25.4 bits (53), Expect = 9.1
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +1

Query: 454 DH-VRNIQHARHVRRHPSRVSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 606
           DH V+N   A ++R++ + +  +A G+       +G G+ H + + +GYA+P
Sbjct: 126 DHDVQNKSEA-NLRKYKN-IESFAKGQGIDFY-PAGRGIGHQIMVEQGYAMP 174


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,336,777
Number of Sequences: 5004
Number of extensions: 75085
Number of successful extensions: 277
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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