Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20805
(773 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 183 1e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 183 1e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 170 1e-42
SB_54| Best HMM Match : Actin (HMM E-Value=0) 142 4e-34
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 109 3e-24
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 78 7e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 68 1e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 62 5e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 49 5e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.78
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.78
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.8
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 2.4
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 2.4
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 2.4
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 2.4
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 30 2.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.4
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 3.2
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 3.2
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 3.2
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 4.2
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 29 5.5
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 5.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 5.5
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 7.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 7.3
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 7.3
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 28 7.3
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 7.3
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 9.6
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 28 9.6
SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 9.6
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 9.6
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 9.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 9.6
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 9.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 183 bits (446), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
REKMTQIMFETFN+PAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAV 140
Score = 175 bits (427), Expect = 2e-44
Identities = 81/88 (92%), Positives = 88/88 (100%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
+SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYS
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 200
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
FTTTAEREIVRDIKEKLCYVALDFE+++
Sbjct: 201 FTTTAEREIVRDIKEKLCYVALDFEQEM 228
Score = 114 bits (274), Expect = 9e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (446), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
REKMTQIMFETFN+PAMYVAIQAV
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAV 139
Score = 173 bits (420), Expect = 2e-43
Identities = 81/88 (92%), Positives = 87/88 (98%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
+SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
FTTTAEREIVRDIKEKL YVALDFE+++
Sbjct: 200 FTTTAEREIVRDIKEKLAYVALDFEQEM 227
Score = 111 bits (267), Expect = 6e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 183 bits (446), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
REKMTQIMFETFN+PAMYVAIQAV
Sbjct: 116 REKMTQIMFETFNSPAMYVAIQAV 139
Score = 176 bits (429), Expect = 1e-44
Identities = 82/88 (93%), Positives = 88/88 (100%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
+SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 140 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
FTTTAEREIVRDIKEKLCYVALDFE+++
Sbjct: 200 FTTTAEREIVRDIKEKLCYVALDFEQEM 227
Score = 112 bits (270), Expect = 3e-25
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 183 bits (446), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
REKMTQIMFETFN+PAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAV 140
Score = 176 bits (429), Expect = 1e-44
Identities = 82/88 (93%), Positives = 88/88 (100%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
+SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS
Sbjct: 141 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
FTTTAEREIVRDIKEKLCYVALDFE+++
Sbjct: 201 FTTTAEREIVRDIKEKLCYVALDFEQEM 228
Score = 118 bits (285), Expect = 4e-27
Identities = 53/55 (96%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (446), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 57 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
Query: 437 REKMTQIMFETFNTPAMYVAIQAV 508
REKMTQIMFETFN+PAMYVAIQAV
Sbjct: 117 REKMTQIMFETFNSPAMYVAIQAV 140
Score = 114 bits (274), Expect = 9e-26
Identities = 50/55 (90%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 55
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/88 (53%), Positives = 54/88 (61%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
+SLYASGRTTGIV+DS G + H + I ERGYS
Sbjct: 141 LSLYASGRTTGIVMDS------------GDGVSHTV---------------PIYEERGYS 173
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
FTTTAEREIVRDIKEKLCYVALDFE+++
Sbjct: 174 FTTTAEREIVRDIKEKLCYVALDFEQEM 201
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 175 bits (427), Expect = 2e-44
Identities = 81/88 (92%), Positives = 88/88 (100%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
+SLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYS
Sbjct: 103 LSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 162
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
FTTTAEREIVRDIKEKLCYVALDFE+++
Sbjct: 163 FTTTAEREIVRDIKEKLCYVALDFEQEM 190
Score = 112 bits (270), Expect = 3e-25
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 54
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/35 (91%), Positives = 32/35 (91%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 361
DEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 56 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 434 NREKMTQIMFETFNTPAMYVAIQAV 508
N + M +IMFETFN+PAMYVAIQAV
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAV 102
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 170 bits (413), Expect = 1e-42
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
+SLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYS
Sbjct: 19 LSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYS 78
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
FTTTAEREIVRDIKEKLCYVALDF +++
Sbjct: 79 FTTTAEREIVRDIKEKLCYVALDFYQEI 106
Score = 35.1 bits (77), Expect = 0.064
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +2
Query: 455 IMFETFNTPAMYVAIQAV 508
IMFE FN+PA+YVAIQAV
Sbjct: 1 IMFEAFNSPAVYVAIQAV 18
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 142 bits (343), Expect = 4e-34
Identities = 61/88 (69%), Positives = 77/88 (87%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
++LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYS
Sbjct: 2185 MALYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYS 2244
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERKL 771
F +TAE++I+RD+KE LCY A+D+ER+L
Sbjct: 2245 FQSTAEQQIIRDLKETLCYCAMDYEREL 2272
Score = 85.4 bits (202), Expect = 5e-17
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = +2
Query: 341 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 508
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAV 2184
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 116 bits (278), Expect = 3e-26
Identities = 50/87 (57%), Positives = 68/87 (78%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
++LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+
Sbjct: 144 LTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYA 203
Query: 688 FTTTAEREIVRDIKEKLCYVALDFERK 768
F TA+ E VR +KEKLCYV + E++
Sbjct: 204 FNHTADFETVRMMKEKLCYVGYNIEQE 230
Score = 97.9 bits (233), Expect = 8e-21
Identities = 45/100 (45%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Frame = +2
Query: 212 SGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 388
S + G + L+ DEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 389 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 508
VLLTE PLNP NREKM ++MFE + +Y+AIQAV
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAV 143
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 108 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 109 bits (261), Expect = 3e-24
Identities = 47/76 (61%), Positives = 66/76 (86%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 687
+SLYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+
Sbjct: 166 LSLYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHC 225
Query: 688 FTTTAEREIVRDIKEK 735
F +++E EIVR IKE+
Sbjct: 226 FHSSSELEIVRTIKEE 241
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/40 (65%), Positives = 35/40 (87%)
Frame = +2
Query: 389 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAV 508
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAV 165
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 78.2 bits (184), Expect = 7e-15
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TERGY 684
+SLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +RG+
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGH 829
Query: 685 SFTTTAEREIVRDIKEKLCYVALD 756
+FT+++ +IV DIKEK+CY++ D
Sbjct: 830 NFTSSSGWQIVNDIKEKICYLSKD 853
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 84 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 230
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 67.7 bits (158), Expect = 1e-11
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = +1
Query: 535 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 714
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER E
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMET 121
Query: 715 VRDIKEKLCYVALDFERK 768
+ IKE+ Y+ D ++
Sbjct: 122 AKTIKERWGYICPDIAKE 139
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 62.1 bits (144), Expect = 5e-10
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 478
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 479 PAMYVAIQAV 508
PA ++ +V
Sbjct: 63 PAFFLCKNSV 72
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +1
Query: 502 SRVSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 675
S ++ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 71 SVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 406
DEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 288 DEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.45
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 535 TGIVLDSGDGVSHTVPI 585
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 212 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 96
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 215 GRDGRYGTEGLLCRDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 385
GR G + GL ++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 386 EEHPVLLTEAPLNPKANRE 442
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/67 (37%), Positives = 30/67 (44%)
Frame = +3
Query: 519 RVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYH 698
R RS R R+ RRR RR R+P H S SRSR R P R+R H
Sbjct: 221 RSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRHSRSRSPTHRR 279
Query: 699 RRAGNRS 719
R+ + S
Sbjct: 280 HRSRSHS 286
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 459 CSKHSTRPPCTSPSKPCLAVRVRSYHRYRAG 551
C H+ R P T+PS PC V S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +2
Query: 515 CTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 607
CT+ +P +TP T TPC PST+ +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 449 TQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTPCPS--TKDTHSPTP 613
+Q+ E +N P+ + + CT +P +TP T TP T T TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTPSTERYTPSTERYTP 667
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 415 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 507
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 374 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWT 553
++A + +P + E N K + +K+ Q M +T + + + R + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMTL------LYNMPKIMRKFAFELPNWA 919
Query: 554 PATVSPTPCPSTKDTHSP-TPSCV 622
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +2
Query: 395 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPT 574
PVL A P A + TQ + P ++ V+ P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 575 PCPSTKDTHSPTP 613
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/65 (26%), Positives = 24/65 (36%)
Frame = +2
Query: 413 APLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTPCPSTK 592
A P A + + +NTP I + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 593 DTHSP 607
P
Sbjct: 946 QPQPP 950
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 333 SSQLVTI--PCSMGYLRV-RIPLLLCASSLHKSPSVPYRP 223
S LV++ P S Y + RIP LC SL PS PY+P
Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNE 370
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAV 182
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 503 AVSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*P 634
+V CT P ++ P T + T P TK P PS + T P
Sbjct: 146 SVEDCTGTPEPTITSKPPVTETTTTKPETKPPKPPAPSTIPTPP 189
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 182 VPLDRGKAPPSGRDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 355
V L + +GR+ G+ +CR +A ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 356 TFYN 367
T N
Sbjct: 497 TCPN 500
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -3
Query: 393 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSL--HKSPSVPYRPS 220
CS + + C + ++V CS + V + ++C+ H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 219 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 127
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 515 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 616
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 386 EEHPVLLTEAPLNPKANREKMTQIMF-ETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPAT 562
EEH ++ T N ++ + MF E +TP + S + P P+S TP+
Sbjct: 2034 EEHVMMETTLHHNNQSMCVPVESGMFREKHHTPPSAHSYGTSSYDSSPQKLPISYLTPSP 2093
Query: 563 VSPTPCPSTKDTHSPTPSC 619
SP S+ +HS +C
Sbjct: 2094 ESPKDWSSSPSSHSDWSNC 2112
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 518 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 622
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 518 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 616
TRP VP +T PTP P T P P+
Sbjct: 932 TRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 500 QAVSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 619
+A C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 321 VTIPCSMGYLRVRIPLLLCASSLHKSPSVP 232
V PC M LRVR+ C S LH + P
Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/74 (27%), Positives = 25/74 (33%)
Frame = +2
Query: 395 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPT 574
P T P P T +T TP P P + TP T +PT
Sbjct: 29 PTPTTHTPTKPSPTTPTSTAPT-QTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Query: 575 PCPSTKDTHSPTPS 616
TK T + TP+
Sbjct: 88 TSTLTKPTPATTPT 101
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 509 SRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 616
+R P+ PP C + V PTP S+K + SP+PS
Sbjct: 327 TRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/92 (28%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Frame = +2
Query: 353 HTFYNELRVAP--EEHPVLLTEAPLNPKAN--REKMTQIMFETFNTPAMYVAIQAVSRCT 520
HT N AP HP L P+A M + ET P M V+
Sbjct: 276 HTISNPAMAAPWVTPHPATLPVTLFTPQAAPVTPPMGAQLPET-EQPQMVAPSSTVTPPV 334
Query: 521 RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 616
PP S P PTP + +P PS
Sbjct: 335 TEPAPPSSVVAPPPAVPTPATAPPPVVAPPPS 366
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 570 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 671
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 407 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTP 577
T+AP L PK T + ET + PA+ +A + + V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 578 CPSTKDTHSP 607
+T+ T +P
Sbjct: 575 TAATEITAAP 584
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +2
Query: 356 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVP 535
T E VAPE + E ++P+ T + ET TP VA + V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 536 PVSCWTPATVSPTPCPSTKDTHSP 607
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 28.3 bits (60), Expect = 7.3
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Frame = +3
Query: 462 SKHSTRPPCT----SPSKPCLAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGL 629
S S PP + SPS+ R R + +R C HR L P RH
Sbjct: 213 SSSSLSPPSSLQSSSPSRHLHCHRPRLSNHHRPSRHHHC--HRPRLSNHHRPSRHLHCHC 270
Query: 630 SRSRPHRLPHEDPHRARLLVHYHRRAGNRS*H 725
R H H RL + H +R H
Sbjct: 271 PRLSNHHRLSRHLHSNRLRLSIHHHPSSRHHH 302
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Frame = +2
Query: 368 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVP 535
E APE V T AP + P+ +T + ET PA A++ + +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 536 PVSCWTPATVSP--TPCPSTKDTHSPT--PSCVW 625
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +2
Query: 356 TFYNELRVAPE----EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRCTR 523
T +E VAP+ L E + P+ + + ET P VA + +
Sbjct: 487 TVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDT 546
Query: 524 PVVPPVSCWTPATVSP--TPCPST 589
P+VP + +TV+P T P T
Sbjct: 547 PIVPETTVALESTVAPEITVVPET 570
>SB_9366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1221
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = +3
Query: 492 SPSKPCLAVRVRSYHRYRAGLRRRCLPHRA----HLRRIRTPPRHPASGLSRSRPHRLP 656
+PSKP + + H ++ R+ P H + ++PP HP S S+P P
Sbjct: 388 TPSKPPMPAKSPGRHSGQSSPRQASPPQSVKSPIHFQANKSPPFHPQRSPSASKPSSRP 446
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 278 LFCSVPHLYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
L C + ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,062,365
Number of Sequences: 59808
Number of extensions: 684478
Number of successful extensions: 2997
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 2349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2965
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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