Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20803
(562 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D84224-1|BAA95668.1| 900|Homo sapiens methionyl tRNA synthetase... 48 2e-05
BT007338-1|AAP36002.1| 900|Homo sapiens methionine-tRNA synthet... 48 2e-05
BC015011-1|AAH15011.1| 899|Homo sapiens MARS protein protein. 48 2e-05
BC011849-1|AAH11849.1| 900|Homo sapiens methionyl-tRNA syntheta... 48 2e-05
BC011639-1|AAH11639.1| 900|Homo sapiens methionyl-tRNA syntheta... 48 2e-05
BC006328-1|AAH06328.1| 900|Homo sapiens methionyl-tRNA syntheta... 48 2e-05
BC002384-1|AAH02384.1| 900|Homo sapiens methionyl-tRNA syntheta... 48 2e-05
AK222767-1|BAD96487.1| 900|Homo sapiens methionine-tRNA synthet... 48 2e-05
X94754-1|CAA64381.1| 900|Homo sapiens yeast methionyl-tRNA synt... 47 4e-05
BC150289-1|AAI50290.1| 1362|Homo sapiens Unknown (protein for IM... 33 0.91
AL357081-2|CAI41323.1| 1362|Homo sapiens spectrin repeat contain... 33 0.91
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 33 0.91
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 33 0.91
AB033088-1|BAA86576.1| 1362|Homo sapiens KIAA1262 protein protein. 33 0.91
AL592301-2|CAI13929.1| 178|Homo sapiens chromosome 9 open readi... 30 4.8
AF412027-1|AAM62309.1| 336|Homo sapiens Williams-Beuren syndrom... 30 6.4
>D84224-1|BAA95668.1| 900|Homo sapiens methionyl tRNA synthetase
protein.
Length = 900
Score = 48.0 bits (109), Expect = 2e-05
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSAAL GK DV ++
Sbjct: 60 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKK-GEDVLGSVR 118
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA Y LL
Sbjct: 119 RALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLL 156
>BT007338-1|AAP36002.1| 900|Homo sapiens methionine-tRNA synthetase
protein.
Length = 900
Score = 48.0 bits (109), Expect = 2e-05
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSAAL GK DV ++
Sbjct: 60 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKK-GEDVLGSVR 118
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA Y LL
Sbjct: 119 RALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLL 156
>BC015011-1|AAH15011.1| 899|Homo sapiens MARS protein protein.
Length = 899
Score = 48.0 bits (109), Expect = 2e-05
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSAAL GK DV ++
Sbjct: 59 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKK-GEDVLGSVR 117
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA Y LL
Sbjct: 118 RALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLL 155
>BC011849-1|AAH11849.1| 900|Homo sapiens methionyl-tRNA synthetase
protein.
Length = 900
Score = 48.0 bits (109), Expect = 2e-05
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSAAL GK DV ++
Sbjct: 60 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKK-GEDVLGSVR 118
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA Y LL
Sbjct: 119 RALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLL 156
>BC011639-1|AAH11639.1| 900|Homo sapiens methionyl-tRNA synthetase
protein.
Length = 900
Score = 48.0 bits (109), Expect = 2e-05
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSAAL GK DV ++
Sbjct: 60 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKK-GEDVLGSVR 118
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA Y LL
Sbjct: 119 RALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLL 156
>BC006328-1|AAH06328.1| 900|Homo sapiens methionyl-tRNA synthetase
protein.
Length = 900
Score = 48.0 bits (109), Expect = 2e-05
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSAAL GK DV ++
Sbjct: 60 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKK-GEDVLGSVR 118
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA Y LL
Sbjct: 119 RALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLL 156
>BC002384-1|AAH02384.1| 900|Homo sapiens methionyl-tRNA synthetase
protein.
Length = 900
Score = 48.0 bits (109), Expect = 2e-05
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSAAL GK DV ++
Sbjct: 60 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKK-GEDVLGSVR 118
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA Y LL
Sbjct: 119 RALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLL 156
>AK222767-1|BAD96487.1| 900|Homo sapiens methionine-tRNA synthetase
variant protein.
Length = 900
Score = 48.0 bits (109), Expect = 2e-05
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSAAL GK DV ++
Sbjct: 60 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKK-GEDVLGSVR 118
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA Y LL
Sbjct: 119 RALTHIDHSLSRQNCPFLAGETESLADIVLWGALYPLL 156
>X94754-1|CAA64381.1| 900|Homo sapiens yeast methionyl-tRNA
synthetase homolog protein.
Length = 900
Score = 47.2 bits (107), Expect = 4e-05
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 263 FSSNAAVQYLFPILDMSENGQCQQLQEWEATRLQPSLSAAL------GKSPASDVKQVLK 424
FS++A +Y F + ++ Q EWEAT LQP+LSA L GK DV ++
Sbjct: 60 FSTSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAPLYYLVVQGKK-GEDVLGSVR 118
Query: 425 SSLEHVNGLL--EGHQYVLGDKISAADISI-GARYILL 529
+L H++ L + ++ G+ S ADI + GA+Y LL
Sbjct: 119 RALTHIDHSLSRQNCPFLAGETESLADIVLWGAQYPLL 156
>BC150289-1|AAI50290.1| 1362|Homo sapiens Unknown (protein for
IMAGE:8860128) protein.
Length = 1362
Score = 32.7 bits (71), Expect = 0.91
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 329 QQLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAAD 499
Q+L EW A QP+++ AL +SP D+ Q L + LE Q +L I AD
Sbjct: 136 QELMEW-AEEQQPNIAEALKQSPPPDMAQNLLMDHLAICSELEAKQMLLKSLIKDAD 191
>AL357081-2|CAI41323.1| 1362|Homo sapiens spectrin repeat
containing, nuclear envelope 1 protein.
Length = 1362
Score = 32.7 bits (71), Expect = 0.91
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 329 QQLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAAD 499
Q+L EW A QP+++ AL +SP D+ Q L + LE Q +L I AD
Sbjct: 136 QELMEW-AEEQQPNIAEALKQSPPPDMAQNLLMDHLAICSELEAKQMLLKSLIKDAD 191
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 32.7 bits (71), Expect = 0.91
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 329 QQLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAAD 499
Q+L EW A QP+++ AL +SP D+ Q L + LE Q +L I AD
Sbjct: 4283 QELMEW-AEEQQPNIAEALKQSPPPDMAQNLLMDHLAICSELEAKQMLLKSLIKDAD 4338
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 32.7 bits (71), Expect = 0.91
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 329 QQLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAAD 499
Q+L EW A QP+++ AL +SP D+ Q L + LE Q +L I AD
Sbjct: 4354 QELMEW-AEEQQPNIAEALKQSPPPDMAQNLLMDHLAICSELEAKQMLLKSLIKDAD 4409
>AB033088-1|BAA86576.1| 1362|Homo sapiens KIAA1262 protein protein.
Length = 1362
Score = 32.7 bits (71), Expect = 0.91
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 329 QQLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAAD 499
Q+L EW A QP+++ AL +SP D+ Q L + LE Q +L I AD
Sbjct: 136 QELMEW-AEEQQPNIAEALKQSPPPDMAQNLLMDHLAICSELEAKQMLLKSLIKDAD 191
>AL592301-2|CAI13929.1| 178|Homo sapiens chromosome 9 open reading
frame 151 protein.
Length = 178
Score = 30.3 bits (65), Expect = 4.8
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3
Query: 377 HLGTAEGE*PPILEAAGIVHSRTCPGSGTDTGPP 276
H EG +LEAAG S P +G D GPP
Sbjct: 137 HRVAGEGALELVLEAAGAPTSTAAPEAGEDEGPP 170
>AF412027-1|AAM62309.1| 336|Homo sapiens Williams-Beuren syndrome
critical region protein 19 protein.
Length = 336
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -3
Query: 296 GTDTGPPH---CWKRTLFWIDLEERQLTGP 216
G D PPH CWKR + W D E P
Sbjct: 89 GVDPSPPHRSFCWKRKMEWWDKSEESEEEP 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,891,518
Number of Sequences: 237096
Number of extensions: 1539621
Number of successful extensions: 8039
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8039
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -