Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20803
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29535-8|AAK31452.2| 175|Caenorhabditis elegans Hypothetical pr... 33 0.14
U29535-7|AAM81113.1| 275|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z75531-2|CAA99804.2| 278|Caenorhabditis elegans Hypothetical pr... 29 2.3
AY728063-1|AAU43724.1| 278|Caenorhabditis elegans cadmium-induc... 29 2.3
Z81529-9|CAB04302.1| 277|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF301606-1|AAG30870.1| 277|Caenorhabditis elegans cadmium-induc... 28 4.0
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z75543-13|CAI79192.1| 281|Caenorhabditis elegans Hypothetical p... 27 9.2
Z75543-12|CAA99874.4| 280|Caenorhabditis elegans Hypothetical p... 27 9.2
Z75531-1|CAA99803.1| 278|Caenorhabditis elegans Hypothetical pr... 27 9.2
AY728062-1|AAU43723.1| 278|Caenorhabditis elegans cadmium-induc... 27 9.2
AY728061-1|AAU43722.1| 281|Caenorhabditis elegans cadmium-induc... 27 9.2
>U29535-8|AAK31452.2| 175|Caenorhabditis elegans Hypothetical
protein C25H3.7a protein.
Length = 175
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +2
Query: 371 LSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS----IGARYILLLTM 538
++ LGK ++ K++L+ + ++ +L +++ GD+I++ D S IGA + L
Sbjct: 85 VNGVLGKLDVAEQKELLRRDIRAIDDILGDKKFLFGDRITSVDCSVFGQIGAVFYLPYRQ 144
Query: 539 MISE 550
IS+
Sbjct: 145 QISD 148
>U29535-7|AAM81113.1| 275|Caenorhabditis elegans Hypothetical
protein C25H3.7b protein.
Length = 275
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +2
Query: 371 LSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS----IGARYILLLTM 538
++ LGK ++ K++L+ + ++ +L +++ GD+I++ D S IGA + L
Sbjct: 185 VNGVLGKLDVAEQKELLRRDIRAIDDILGDKKFLFGDRITSVDCSVFGQIGAVFYLPYRQ 244
Query: 539 MISE 550
IS+
Sbjct: 245 QISD 248
>Z75531-2|CAA99804.2| 278|Caenorhabditis elegans Hypothetical
protein C54D10.2 protein.
Length = 278
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 380 ALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
A+G +D+ +L L+ + L +++ GD++ AAD ++
Sbjct: 192 AIGDFEQTDLDDILHRDLQTIQDYLGEQKFLFGDEVKAADAAV 234
>AY728063-1|AAU43724.1| 278|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-3 protein.
Length = 278
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 380 ALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
A+G +D+ +L L+ + L +++ GD++ AAD ++
Sbjct: 192 AIGDFEQTDLDDILHRDLQTIQDYLGEQKFLFGDEVKAADAAV 234
>Z81529-9|CAB04302.1| 277|Caenorhabditis elegans Hypothetical
protein F35E8.11 protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 380 ALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
A+G S++ ++L L V L +++ G++I+AAD ++
Sbjct: 191 AIGDFELSELDEILHRDLRIVENTLAKKKFLFGEEITAADATV 233
>AF301606-1|AAG30870.1| 277|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-1 protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 380 ALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
A+G S++ ++L L V L +++ G++I+AAD ++
Sbjct: 191 AIGDFELSELDEILHRDLRIVENTLAKKKFLFGEEITAADATV 233
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical
protein F23D12.2 protein.
Length = 1322
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 284 QYLFPILDMSENGQCQQLQEWEA----TRLQPSLSAALGKSPASDVKQVLKSSLE 436
Q L P L++SE +CQ ++ LQP L + S S ++VLK+ LE
Sbjct: 359 QELIPPLELSETSKCQVHKQGNKKVLENVLQPELKTPVTFSKDSVKREVLKAPLE 413
>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical
protein F10F2.2 protein.
Length = 1343
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 196 LKTMYSQGPVSCRSSRSIQNKVLFQQCGGPVSVP 297
L ++ S+ ++C+ RS+ V QQC GP+ P
Sbjct: 646 LPSVASKRYLTCKVDRSVTGLVAQQQCVGPLHTP 679
>Z75543-13|CAI79192.1| 281|Caenorhabditis elegans Hypothetical
protein K01D12.13b protein.
Length = 281
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = +2
Query: 356 RLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
++ + ++A+G +++ ++L L V +L +Y+ GD I+ D ++
Sbjct: 187 KIYQNSTSAIGDFEPAELDELLHRDLRVVETILGNKKYLFGDHIAPVDATV 237
>Z75543-12|CAA99874.4| 280|Caenorhabditis elegans Hypothetical
protein K01D12.13a protein.
Length = 280
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = +2
Query: 356 RLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
++ + ++A+G +++ ++L L V +L +Y+ GD I+ D ++
Sbjct: 186 KIYQNSTSAIGDFEPAELDELLHRDLRVVETILGNKKYLFGDHIAPVDATV 236
>Z75531-1|CAA99803.1| 278|Caenorhabditis elegans Hypothetical
protein C54D10.1 protein.
Length = 278
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/45 (20%), Positives = 24/45 (53%)
Frame = +2
Query: 374 SAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
+ ++G ++ +L + + L +++ GDK++AAD ++
Sbjct: 190 TGSIGDFELKEMDDILHRDFQTIQDYLGDQKFLFGDKVTAADAAV 234
>AY728062-1|AAU43723.1| 278|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-2 protein.
Length = 278
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/45 (20%), Positives = 24/45 (53%)
Frame = +2
Query: 374 SAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
+ ++G ++ +L + + L +++ GDK++AAD ++
Sbjct: 190 TGSIGDFELKEMDDILHRDFQTIQDYLGDQKFLFGDKVTAADAAV 234
>AY728061-1|AAU43722.1| 281|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-7 protein.
Length = 281
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = +2
Query: 356 RLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADISI 508
++ + ++A+G +++ ++L L V +L +Y+ GD I+ D ++
Sbjct: 187 KIYQNSTSAIGDFEPAELDELLHRDLRVVETILGNKKYLFGDHIAPVDATV 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,017,508
Number of Sequences: 27780
Number of extensions: 238449
Number of successful extensions: 605
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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