Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20803
(562 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 26 0.30
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.9
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 6.4
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 6.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 6.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 6.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 6.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 6.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 6.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 6.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 6.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 6.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 6.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 6.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 6.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 6.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 6.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 6.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 6.4
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 21 8.5
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 21 8.5
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 74 GFCVRNN*NEDIHKQKQYWHAKTVNSG*FSSKESRNCGSR 193
GF ++NN N+D K+ ++ T+N F+ + C +
Sbjct: 32 GFIIQNNNNDDWSVGKKNSNSGTINESEFNDENYWQCNDK 71
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/35 (28%), Positives = 14/35 (40%)
Frame = +1
Query: 217 GPVSCRSSRSIQNKVLFQQCGGPVSVPDPGHVREW 321
G V+C SS + V +CG V + W
Sbjct: 154 GTVNCTSSIASSGVVSAGECGPAADVDEKTDANSW 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 350 PPILEAAGIVHSRTCPGSGTDTGP 279
P I +G+V + PG+G + P
Sbjct: 381 PSIRNRSGLVSGSSTPGTGREHDP 404
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFP 129
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFP 129
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFP 129
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFP 129
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFP 129
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFP 129
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 104 IMVRPWVPMRGQVPGSRHIGPLTPFP 129
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFP 378
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFP 378
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFP 378
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFP 378
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFP 378
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFP 378
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 352 IMVRPWVPMRGQVPGSRHIGPLTPFP 377
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 337 IMVRPWVPMRGQVPGSRHIGPLTPFP 362
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 448 IVGRPPIRSRGQNLSGRHLNRSTLYP 525
I+ RP + RGQ RH+ T +P
Sbjct: 353 IMVRPWVPMRGQVPGSRHIGPLTPFP 378
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 359 LQPSLSAALGKSPASDVKQVLKS 427
L+ L ALG++P V + LKS
Sbjct: 48 LRRQLKCALGEAPCDPVGRRLKS 70
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 359 LQPSLSAALGKSPASDVKQVLKS 427
L+ L ALG++P V + LKS
Sbjct: 48 LRRQLKCALGEAPCDPVGRRLKS 70
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,172
Number of Sequences: 438
Number of extensions: 2953
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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