Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20803
(562 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50830.1 68414.m05716 hypothetical protein 30 0.92
At4g36760.2 68417.m05215 aminopeptidase P similar to Xaa-Pro ami... 30 1.2
At4g36760.1 68417.m05216 aminopeptidase P similar to Xaa-Pro ami... 30 1.2
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 29 2.8
At1g28560.1 68414.m03515 snRNA activating complex family protein... 29 2.8
At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 28 3.7
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 28 3.7
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 28 3.7
At5g19660.1 68418.m02339 subtilase family protein contains Pfam ... 28 3.7
At5g16710.1 68418.m01956 dehydroascorbate reductase, putative St... 27 8.6
At2g45270.1 68415.m05635 glycoprotease M22 family protein simila... 27 8.6
>At1g50830.1 68414.m05716 hypothetical protein
Length = 768
Score = 30.3 bits (65), Expect = 0.92
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 186 EAEFEDDVFAGPRQLPLLEVDPE-*GSFPAMRRSSICSR 299
+ +++DD+ A P+ LPL +V + FPA RR S+ R
Sbjct: 481 DEDYDDDIDASPKVLPLSQVFQKLEEGFPAKRRRSVIHR 519
>At4g36760.2 68417.m05215 aminopeptidase P similar to Xaa-Pro
aminopeptidase 2 [Lycopersicon esculentum] GI:15384991;
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 519
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 275 AAVQYLFPILDMSEN--GQCQQLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNG 448
A VQYL + + + G E EA++ +PS ++ L + SD + L++S EH G
Sbjct: 333 AVVQYLVWLDNQMQELYGASGYFLEAEASKKKPSETSKLTEVTVSDKLESLRASKEHFRG 392
Query: 449 L 451
L
Sbjct: 393 L 393
>At4g36760.1 68417.m05216 aminopeptidase P similar to Xaa-Pro
aminopeptidase 2 [Lycopersicon esculentum] GI:15384991;
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 634
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 275 AAVQYLFPILDMSEN--GQCQQLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNG 448
A VQYL + + + G E EA++ +PS ++ L + SD + L++S EH G
Sbjct: 333 AVVQYLVWLDNQMQELYGASGYFLEAEASKKKPSETSKLTEVTVSDKLESLRASKEHFRG 392
Query: 449 L 451
L
Sbjct: 393 L 393
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 220 PVSCRSSRSIQNKVLFQQCGGPVSVPDPGHVREWTMPAASRMGGYSPSA 366
P SC + S GP S+P P V PA+S + + P +
Sbjct: 122 PSSCSTPSSFSPDSFSHSNTGPWSIPQPSPVFSSIAPASSALSSFGPDS 170
>At1g28560.1 68414.m03515 snRNA activating complex family protein
similar to snRNA activating protein complex 50 kDa
subunit (SNAPc 50 kDa subunit) (Proximal sequence
element-binding transcription factor beta subunit)
(PSE-binding factor beta subunit) (PTF beta subunit)
(Swiss-Prot:Q92966) [Homo sapiens]
Length = 375
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 275 AAVQYLFPILDMSENGQCQQLQEWEAT---RLQPSLSAALGKSPASDVKQVLKSSLE 436
+A Y +PILD N + + L++WE LQ LG++ + D+ + + ++
Sbjct: 208 SAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAKSVDLPRYRTADMQ 264
>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
{Arabidopsis thaliana}
Length = 699
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 332 QLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS 505
QL+E+E +L + L D K+ + E GL + + VLGDK+ +S
Sbjct: 503 QLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLGDKVEKVIVS 560
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 332 QLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS 505
QL+E+E +L + L D K+ + E GL + + VLGDK+ +S
Sbjct: 503 QLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLGDKVEKVIVS 560
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 332 QLQEWEATRLQPSLSAALGKSPASDVKQVLKSSLEHVNGLLEGHQYVLGDKISAADIS 505
QL+E+E +L + L D K+ + E GL + + VLGDK+ +S
Sbjct: 503 QLKEFEGKKLVSATKEGLKLEETDDEKKKKEELKEKFEGLCKVIKDVLGDKVEKVIVS 560
>At5g19660.1 68418.m02339 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 1038
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 287 YLFPILDMSENGQCQQLQEWEATRLQPSLSAAL 385
+ FP+LD SE+G Q L EA++ P++ L
Sbjct: 799 HTFPLLDSSESGATQNLLLTEASKEDPAVLGLL 831
>At5g16710.1 68418.m01956 dehydroascorbate reductase, putative
Strong similarity to dehydroascorbate reductase
[Spinacia oleracea] gi:10952512 gb:AAG24945
Length = 258
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 389 KSPASDVKQVLKSSLEHVNGLLEGH-QYVLGDKISAADISIGAR 517
K +QVL L N ++ + ++ G+KISAAD+S+ +
Sbjct: 159 KDSGDGTEQVLLDELTTFNDYIKDNGPFINGEKISAADLSLAPK 202
>At2g45270.1 68415.m05635 glycoprotease M22 family protein similar
to SP|P36175 O-sialoglycoprotein endopeptidase (EC
3.4.24.57) (Glycoprotease) {Pasteurella haemolytica};
contains Pfam profile PF00814: Glycoprotease family
Length = 480
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +1
Query: 187 KPSLKTMYSQGPVSC------RSSRSIQNKVLFQQCGGPVSVPDPGHVREWTMPAASRMG 348
+PS+K M G V+ R + ++NK L C P D G + WT R+G
Sbjct: 359 EPSIKHMVISGGVASNKYVRLRLNNIVENKNLKLVCPPPSLCTDNGVMVAWTGLEHFRVG 418
Query: 349 GYSP 360
Y P
Sbjct: 419 RYDP 422
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,352,700
Number of Sequences: 28952
Number of extensions: 224343
Number of successful extensions: 576
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1072696904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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