Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20801
         (747 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0126 + 18252594-18256922                                         29   3.0  
03_05_0533 - 25332015-25332145,25332231-25332449,25332595-253327...    28   6.9  

>05_04_0126 + 18252594-18256922
          Length = 1442

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 592 EGENNYIYIFRSIIFQCDVDIVCMYVY 672
           EG NN   IFR I+ +CD +  CM ++
Sbjct: 633 EGGNNNSQIFRDILVKCDPNEFCMRMF 659


>03_05_0533 -
           25332015-25332145,25332231-25332449,25332595-25332754,
           25332973-25333025,25334998-25335433
          Length = 332

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 206 EDLCTGNALTL--IYLFYYLFKKVLPYHKHFTLKITNYLIYGLMHVTIMAYITFAIY 370
           +DL  G  L    + +FY     V+P H H  + + + L+ G +HV    +++ ++Y
Sbjct: 151 DDLKLGTVLDTSEVAVFYLPAGTVMPLHDHPGMTVFSKLLAGSVHVQSFDWVSPSVY 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,336,536
Number of Sequences: 37544
Number of extensions: 355371
Number of successful extensions: 708
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)