Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20801
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    27   0.61 
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    26   1.4  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   5.7  
U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    24   5.7  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     24   5.7  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     24   5.7  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   5.7  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 27.1 bits (57), Expect = 0.61
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +2

Query: 212 LCTGNALTLIYLFYYLFKKVLPYHKHFTLKITNYLIYGLMHVTIMAYITFAI 367
           LC    L+L  +F+ L  +++P        +  YL++ +M VT+   +T A+
Sbjct: 273 LCISILLSLT-VFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAV 323


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 691 NGSILTC-IHTYRQYPHHIGRLSIEKYIYN 605
           NG+++T   HT R  PH+I  L++  Y+ N
Sbjct: 119 NGTVITIGEHTIR-LPHNISNLTVNTYLIN 147


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 251 YYLFKKVLPYHKHFTLKITNYLIYGLMHVTIMAYITF 361
           YY FK+ LP + +  L     +I  +    +M Y  +
Sbjct: 430 YYYFKRFLPSYTYEELNFNGVVIKDVTFDKLMTYFDY 466


>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 251 YYLFKKVLPYHKHFTLKITNYLIYGLMHVTIMAYITF 361
           YY FK+ LP + +  L     +I  +    +M Y  +
Sbjct: 98  YYYFKRFLPSYTYEELNFNGVVIKDVTFDKLMTYFDY 134


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 251 YYLFKKVLPYHKHFTLKITNYLIYGLMHVTIMAYITF 361
           YY FK+ LP + +  L     +I  +    +M Y  +
Sbjct: 430 YYYFKRFLPSYTYEELNFNGVVIKDVTFDKLMTYFDY 466


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 251 YYLFKKVLPYHKHFTLKITNYLIYGLMHVTIMAYITF 361
           YY FK+ LP + +  L     +I  +    +M Y  +
Sbjct: 430 YYYFKRFLPSYTYEELNFNGVVIKDVTFDKLMTYFDY 466


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 251 YYLFKKVLPYHKHFTLKITNYLIYGLMHVTIMAYITF 361
           YY FK+ LP + +  L     +I  +    +M Y  +
Sbjct: 430 YYYFKRFLPSYTYEELNFNGVVIKDVTFDKLMTYFDY 466


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,389
Number of Sequences: 2352
Number of extensions: 15378
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)