Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20800
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...    91   6e-19
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...    91   6e-19
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...    91   6e-19
Z81527-14|CAB04278.2|  506|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z79753-8|CAB02089.2|  506|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AC006791-4|AAM97974.1|  603|Caenorhabditis elegans Metabotropic ...    27   8.3  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score = 91.1 bits (216), Expect = 6e-19
 Identities = 44/84 (52%), Positives = 57/84 (67%)
 Frame = +3

Query: 258 KSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILG 437
           K+ + GKGVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGANAILG
Sbjct: 85  KAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILG 144

Query: 438 VSLXXXXXXXXXXNVPLYKHLADL 509
           VSL           +PLYK++A+L
Sbjct: 145 VSLAVAKAGAVHKGLPLYKYIAEL 168



 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = +1

Query: 97  KMVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRD 252
           +M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD
Sbjct: 31  RMPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRD 82



 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 33/39 (84%), Positives = 34/39 (87%)
 Frame = +2

Query: 509 AGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGAS 625
           AG   +VLPVPAFNVINGGSHAGNKLAMQEFMI P GAS
Sbjct: 169 AGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS 207


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score = 91.1 bits (216), Expect = 6e-19
 Identities = 44/84 (52%), Positives = 57/84 (67%)
 Frame = +3

Query: 258 KSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILG 437
           K+ + GKGVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGANAILG
Sbjct: 54  KAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILG 113

Query: 438 VSLXXXXXXXXXXNVPLYKHLADL 509
           VSL           +PLYK++A+L
Sbjct: 114 VSLAVAKAGAVHKGLPLYKYIAEL 137



 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 43/51 (84%), Positives = 45/51 (88%)
 Frame = +1

Query: 100 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRD 252
           M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRD 51


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score = 91.1 bits (216), Expect = 6e-19
 Identities = 44/84 (52%), Positives = 57/84 (67%)
 Frame = +3

Query: 258 KSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILG 437
           K+ + GKGVL A+ NINE IAP L     +VT Q++ID+ M+ LDG+ENK  LGANAILG
Sbjct: 54  KAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILG 113

Query: 438 VSLXXXXXXXXXXNVPLYKHLADL 509
           VSL           +PLYK++A+L
Sbjct: 114 VSLAVAKAGAVHKGLPLYKYIAEL 137



 Score = 88.6 bits (210), Expect = 3e-18
 Identities = 43/51 (84%), Positives = 45/51 (88%)
 Frame = +1

Query: 100 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRD 252
           M I  I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD
Sbjct: 1   MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRD 51



 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 33/39 (84%), Positives = 34/39 (87%)
 Frame = +2

Query: 509 AGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGAS 625
           AG   +VLPVPAFNVINGGSHAGNKLAMQEFMI P GAS
Sbjct: 138 AGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAS 176


>Z81527-14|CAB04278.2|  506|Caenorhabditis elegans Hypothetical
           protein F35E12.8 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 219 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 130
           GGT  +     A+  + IN+HC++  +++D
Sbjct: 35  GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64


>Z79753-8|CAB02089.2|  506|Caenorhabditis elegans Hypothetical
           protein F35E12.8 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 219 GGTRGYSCPEQAKLCYQINFHCRVATRVKD 130
           GGT  +     A+  + IN+HC++  +++D
Sbjct: 35  GGTGTFPPDSAARFQFPINYHCKIQFKIQD 64


>AC006791-4|AAM97974.1|  603|Caenorhabditis elegans Metabotropic
           glutamate receptorfamily protein 3, isoform b protein.
          Length = 603

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +1

Query: 469 PRKMFRCTSTWLICWK**YCSTCTSFQCDQWRITCW 576
           PR  +R       CW    C T TS   +  ++ CW
Sbjct: 552 PRGHYRAYQDQTCCWACIPCDTSTSIHNETRKVICW 587


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,536,712
Number of Sequences: 27780
Number of extensions: 256499
Number of successful extensions: 640
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)