Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20798
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25822 Cluster: ORF129 protein; n=1; Plasmodium falcipa...    42   0.020
UniRef50_Q2R4X4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_UPI0000E81661 Cluster: PREDICTED: similar to proline-ri...    34   3.0  
UniRef50_Q1FKX1 Cluster: Regulatory protein, LacI:Periplasmic bi...    33   5.3  
UniRef50_A0Z6D9 Cluster: Putative uncharacterized protein; n=4; ...    33   5.3  
UniRef50_Q5CH32 Cluster: Putative uncharacterized protein; n=2; ...    33   5.3  
UniRef50_Q7SEP0 Cluster: Putative uncharacterized protein NCU033...    33   9.3  

>UniRef50_Q25822 Cluster: ORF129 protein; n=1; Plasmodium
           falciparum|Rep: ORF129 protein - Plasmodium falciparum
          Length = 129

 Score = 41.5 bits (93), Expect = 0.020
 Identities = 23/73 (31%), Positives = 40/73 (54%)
 Frame = +3

Query: 327 LFITTSYCDVTSNLVRPYLIYNINYNEFQFRIPHIWRIYKFSVLASVKLRLYYIR*DRVL 506
           LFI   Y D T  ++  Y IYN+ YN++  ++  I  IYK  +L   K +L +   +++L
Sbjct: 51  LFIIYIYSDKTFKIIYNYTIYNL-YNKYNSKVNKILLIYK--ILLYKKFQLLFYNINQLL 107

Query: 507 YTITKLYRQYTVR 545
           Y I   ++Q  ++
Sbjct: 108 YIIKNNFKQINIK 120


>UniRef50_Q2R4X4 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 283

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVPFPELKPETETSSDVRWPIRHRMIKYNSPQPRVNVS 317
           PEI +I E+PL +  K D   +  F  L+PE E       P + R   Y + +  +N S
Sbjct: 145 PEIEIIHEDPLHMESKPDSTVESSFQSLEPEEEEIHSPEIPFQFRGDLYENYENTLNYS 203


>UniRef50_UPI0000E81661 Cluster: PREDICTED: similar to proline-rich
           protein; n=2; Gallus gallus|Rep: PREDICTED: similar to
           proline-rich protein - Gallus gallus
          Length = 316

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +3

Query: 147 IPVIKEEPLPISDKMDLIPDVPFPELKPETETSSDVRWPIRHRMIKYNSPQP 302
           +PV   +P+P   +     +VP P+ +PE  +  +   P+  + +K  SP P
Sbjct: 261 VPVQNPDPVPCPQEKQECKEVPVPDPEPEQSSIPEKHPPLEQQQVKQPSPWP 312


>UniRef50_Q1FKX1 Cluster: Regulatory protein, LacI:Periplasmic
           binding protein/LacI transcriptional regulator; n=1;
           Clostridium phytofermentans ISDg|Rep: Regulatory
           protein, LacI:Periplasmic binding protein/LacI
           transcriptional regulator - Clostridium phytofermentans
           ISDg
          Length = 348

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 15/37 (40%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
 Frame = -1

Query: 280 IIRCLI--GHRTSDDVSVSGFNSGKGTSGIKSILSEI 176
           +IRCL   G+R  +DV+V+GF++ +G + ++SIL+ +
Sbjct: 264 VIRCLRKRGYRVPEDVAVTGFDNIEGLTQVESILTTV 300


>UniRef50_A0Z6D9 Cluster: Putative uncharacterized protein; n=4;
           Gammaproteobacteria|Rep: Putative uncharacterized
           protein - marine gamma proteobacterium HTCC2080
          Length = 588

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVPFPELKPETETSSD 251
           PE   + E+ + + +K++LIPD+P  +LK   ET  D
Sbjct: 369 PESVDMLEDAMAVEEKLELIPDMPLVQLKQVIETQFD 405


>UniRef50_Q5CH32 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium hominis
          Length = 281

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 19/40 (47%), Positives = 25/40 (62%)
 Frame = -2

Query: 537 YTAYITLLLYIKLDPSEYNIILILQKQAH*TYKYAIYVVF 418
           +TAYI L LYI    S YNI+L+   +   TY  +IYV+F
Sbjct: 134 HTAYIILTLYIMRWKS-YNILLVALPEEIPTYFISIYVIF 172


>UniRef50_Q7SEP0 Cluster: Putative uncharacterized protein
           NCU03303.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU03303.1 - Neurospora crassa
          Length = 530

 Score = 32.7 bits (71), Expect = 9.3
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 165 EPLPISDKMDLIPDVPFPELKPETETSSDVRWP 263
           EP+P +D MD++ +V  P   P TET++ +  P
Sbjct: 266 EPVPRTDPMDIVDEVVAPSAIPPTETTTTISEP 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,976,390
Number of Sequences: 1657284
Number of extensions: 12435237
Number of successful extensions: 28692
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28669
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)