Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20798
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X53380-1|CAA37460.1|  235|Drosophila melanogaster chorion factor...    29   8.4  
M97196-3|AAA28394.1|  253|Drosophila melanogaster DNA-binding pr...    29   8.4  
M97196-2|AAA28395.1|  304|Drosophila melanogaster DNA-binding pr...    29   8.4  
M97196-1|AAA28396.1|  510|Drosophila melanogaster DNA-binding pr...    29   8.4  
BT028816-1|ABI34197.1|  482|Drosophila melanogaster RT01022p pro...    29   8.4  
BT016125-1|AAV37010.1|  500|Drosophila melanogaster GM16860p pro...    29   8.4  
AE014134-793|AAF50966.2|  510|Drosophila melanogaster CG11924-PA...    29   8.4  
AE014134-792|AAO41153.1|  482|Drosophila melanogaster CG11924-PC...    29   8.4  
AE014134-791|AAO41152.1|  482|Drosophila melanogaster CG11924-PB...    29   8.4  
AE014134-790|AAO41151.1|  514|Drosophila melanogaster CG11924-PD...    29   8.4  

>X53380-1|CAA37460.1|  235|Drosophila melanogaster chorion factor
           CF2 protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 62  PQV-IIKEEPLSLSDSGDVVNSVP 84


>M97196-3|AAA28394.1|  253|Drosophila melanogaster DNA-binding
           protein isoform III protein.
          Length = 253

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 48  PQV-IIKEEPLSLSDSGDVVNSVP 70


>M97196-2|AAA28395.1|  304|Drosophila melanogaster DNA-binding
           protein isoform II protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 131 PQV-IIKEEPLSLSDSGDVVNSVP 153


>M97196-1|AAA28396.1|  510|Drosophila melanogaster DNA-binding
           protein isoform I protein.
          Length = 510

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 309 PQV-IIKEEPLSLSDSGDVVNSVP 331


>BT028816-1|ABI34197.1|  482|Drosophila melanogaster RT01022p
           protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 309 PQV-IIKEEPLSLSDSGDVVNSVP 331


>BT016125-1|AAV37010.1|  500|Drosophila melanogaster GM16860p
           protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 309 PQV-IIKEEPLSLSDSGDVVNSVP 331


>AE014134-793|AAF50966.2|  510|Drosophila melanogaster CG11924-PA,
           isoform A protein.
          Length = 510

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 309 PQV-IIKEEPLSLSDSGDVVNSVP 331


>AE014134-792|AAO41153.1|  482|Drosophila melanogaster CG11924-PC,
           isoform C protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 309 PQV-IIKEEPLSLSDSGDVVNSVP 331


>AE014134-791|AAO41152.1|  482|Drosophila melanogaster CG11924-PB,
           isoform B protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 309 PQV-IIKEEPLSLSDSGDVVNSVP 331


>AE014134-790|AAO41151.1|  514|Drosophila melanogaster CG11924-PD,
           isoform D protein.
          Length = 514

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 141 PEIPVIKEEPLPISDKMDLIPDVP 212
           P++ +IKEEPL +SD  D++  VP
Sbjct: 309 PQV-IIKEEPLSLSDSGDVVNSVP 331


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,959,681
Number of Sequences: 53049
Number of extensions: 566531
Number of successful extensions: 1313
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)