Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20798
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    28   7.7  
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    28   7.7  

>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 168 PLPISDKMDLIPDVPFPELKPETETSSDVRWPIRHRMIKYNSP 296
           P+ +SDK+ L     F E KP  +T       ++HR+I+   P
Sbjct: 203 PMIVSDKIPL--KEAFVEPKPRGQTGQQQDTEVKHRLIRIGDP 243


>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +1

Query: 295 HNRGSTCLNIFYLLQLRTAM*HRT*FDHTLYTISITMNFNLEYHIYGVFISLVCLLL*N* 474
           HN+  T  +  +L      M  R    H L  I  T+   L Y   G  IS++CLLL   
Sbjct: 515 HNKTMTSCDCTHLTHFAVLMDVR---GHDLNEIDQTLLTLLTY--VGCIISIICLLLTFF 569

Query: 475 DYIIFAR 495
            Y+IF+R
Sbjct: 570 AYLIFSR 576


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +1

Query: 295 HNRGSTCLNIFYLLQLRTAM*HRT*FDHTLYTISITMNFNLEYHIYGVFISLVCLLL*N* 474
           HN+  T  +  +L      M  R    H L  I  T+   L Y   G  IS++CLLL   
Sbjct: 517 HNKTMTSCDCTHLTHFAVLMDVR---GHDLNEIDQTLLTLLTY--VGCIISIICLLLTFF 571

Query: 475 DYIIFAR 495
            Y+IF+R
Sbjct: 572 AYLIFSR 578


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +1

Query: 295 HNRGSTCLNIFYLLQLRTAM*HRT*FDHTLYTISITMNFNLEYHIYGVFISLVCLLL*N* 474
           HN+  T  +  +L      M  R    H L  I  T+   L Y   G  IS++CLLL   
Sbjct: 515 HNKTMTSCDCTHLTHFAVLMDVR---GHDLNEIDQTLLTLLTY--VGCIISIICLLLTFF 569

Query: 475 DYIIFAR 495
            Y+IF+R
Sbjct: 570 AYLIFSR 576


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = +1

Query: 295 HNRGSTCLNIFYLLQLRTAM*HRT*FDHTLYTISITMNFNLEYHIYGVFISLVCLLL*N* 474
           HN+  T  +  +L      M  R    H L  I  T+   L Y   G  IS++CLLL   
Sbjct: 517 HNKTMTSCDCTHLTHFAVLMDVR---GHDLNEIDQTLLTLLTY--VGCIISIICLLLTFF 571

Query: 475 DYIIFAR 495
            Y+IF+R
Sbjct: 572 AYLIFSR 578


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,474,295
Number of Sequences: 27780
Number of extensions: 314973
Number of successful extensions: 720
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)