Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20797
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    26   1.1  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   3.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.8  

>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 296 DIKNRLPRSVTTIQWENSF-VSVYSKDNPNLLFNMAGFECRILPKCRS 436
           DIK  L R +T +    +F +   + +NPN  F + G     LPK +S
Sbjct: 172 DIKELLARFMTDVIGSCAFGIECNTLENPNSQFRLMGKRMINLPKLKS 219


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 222 CYCNQQCSHCWDQDAL 175
           CYC  QC   +D+D L
Sbjct: 239 CYCGCQCRRGYDRDVL 254


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 129 RFSAEEARDLIQRYLTEH 182
           R  AEEA D +QR++ +H
Sbjct: 735 RARAEEAVDQVQRWMQQH 752


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,840
Number of Sequences: 2352
Number of extensions: 16152
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)