BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20797
(738 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051826-1|AAK93250.1| 1328|Drosophila melanogaster LD33339p pro... 179 3e-45
AE013599-1403|AAF58573.1| 2396|Drosophila melanogaster CG8877-PA... 179 3e-45
AY113277-1|AAM29282.1| 290|Drosophila melanogaster AT17811p pro... 29 6.6
AY069774-1|AAL39919.1| 299|Drosophila melanogaster SD01558p pro... 29 6.6
AE014134-3103|AAN11044.1| 290|Drosophila melanogaster CG10026-P... 29 6.6
AE014134-3102|AAF53803.1| 290|Drosophila melanogaster CG10026-P... 29 6.6
AE014134-3101|AAN11043.2| 299|Drosophila melanogaster CG10026-P... 29 6.6
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 29 8.7
AY051492-1|AAK92916.1| 627|Drosophila melanogaster GH14707p pro... 29 8.7
AL050231-7|CAB43324.1| 306|Drosophila melanogaster EG:BACR37P7.... 29 8.7
AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 29 8.7
AE014298-18|AAF45493.2| 306|Drosophila melanogaster CG13375-PA ... 29 8.7
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 29 8.7
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 29 8.7
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 29 8.7
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 29 8.7
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P... 29 8.7
AE014134-2349|AAF53301.1| 627|Drosophila melanogaster CG10859-P... 29 8.7
AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-P... 29 8.7
>AY051826-1|AAK93250.1| 1328|Drosophila melanogaster LD33339p
protein.
Length = 1328
Score = 179 bits (436), Expect = 3e-45
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +3
Query: 3 ASEMAGPPQLPNDFLSYQDRQTETAHPIRLYCRYIDRIHIFFRFSAEEARDLIQRYLTEH 182
+SEMAGPPQ+PNDFL++QD TETAHPIRLYCRY+DRIH+FFRFSAEEARDLIQRYLTEH
Sbjct: 50 SSEMAGPPQMPNDFLTFQDTVTETAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEH 109
Query: 183 PDPNNENIVGYNNKKCWPRDARMR 254
PDPNNENIVGYNNKKCWPRDARMR
Sbjct: 110 PDPNNENIVGYNNKKCWPRDARMR 133
Score = 174 bits (424), Expect = 9e-44
Identities = 76/85 (89%), Positives = 83/85 (97%)
Frame = +2
Query: 254 LMKHDVNLGRAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMAGFECRILPKCR 433
LMKHDVNLGRAVFWDIKNRLPRSVTTI WE++FVSVYSKDNPNLLFNM+GFECRILPKCR
Sbjct: 134 LMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPKCR 193
Query: 434 SQHEELSHRDGVWNLQNEVTKERTA 508
+Q+EE +HRDGVWNLQNE+TKERTA
Sbjct: 194 TQNEEFTHRDGVWNLQNEITKERTA 218
Score = 157 bits (380), Expect = 2e-38
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = +1
Query: 505 SKCYLRVDDESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELL 684
++C+LRVDDESL RFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELL
Sbjct: 218 AQCFLRVDDESLGRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELL 277
Query: 685 DLLVKCENKIQTRIKIGL 738
DLLVKCENKIQTRIKIGL
Sbjct: 278 DLLVKCENKIQTRIKIGL 295
>AE013599-1403|AAF58573.1| 2396|Drosophila melanogaster CG8877-PA
protein.
Length = 2396
Score = 179 bits (436), Expect = 3e-45
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = +3
Query: 3 ASEMAGPPQLPNDFLSYQDRQTETAHPIRLYCRYIDRIHIFFRFSAEEARDLIQRYLTEH 182
+SEMAGPPQ+PNDFL++QD TETAHPIRLYCRY+DRIH+FFRFSAEEARDLIQRYLTEH
Sbjct: 1118 SSEMAGPPQMPNDFLTFQDTVTETAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEH 1177
Query: 183 PDPNNENIVGYNNKKCWPRDARMR 254
PDPNNENIVGYNNKKCWPRDARMR
Sbjct: 1178 PDPNNENIVGYNNKKCWPRDARMR 1201
Score = 174 bits (424), Expect = 9e-44
Identities = 76/85 (89%), Positives = 83/85 (97%)
Frame = +2
Query: 254 LMKHDVNLGRAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMAGFECRILPKCR 433
LMKHDVNLGRAVFWDIKNRLPRSVTTI WE++FVSVYSKDNPNLLFNM+GFECRILPKCR
Sbjct: 1202 LMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPKCR 1261
Query: 434 SQHEELSHRDGVWNLQNEVTKERTA 508
+Q+EE +HRDGVWNLQNE+TKERTA
Sbjct: 1262 TQNEEFTHRDGVWNLQNEITKERTA 1286
Score = 157 bits (380), Expect = 2e-38
Identities = 74/78 (94%), Positives = 77/78 (98%)
Frame = +1
Query: 505 SKCYLRVDDESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELL 684
++C+LRVDDESL RFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELL
Sbjct: 1286 AQCFLRVDDESLGRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELL 1345
Query: 685 DLLVKCENKIQTRIKIGL 738
DLLVKCENKIQTRIKIGL
Sbjct: 1346 DLLVKCENKIQTRIKIGL 1363
>AY113277-1|AAM29282.1| 290|Drosophila melanogaster AT17811p
protein.
Length = 290
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 281 RAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMAGFECRILPKCRSQHEE--LS 454
RA +W I+N + ++ S Y K P L ++ + + R QH L
Sbjct: 65 RARYWKIENSYKLLCSYYRFREQNKSFYEKVRPLDLRHVGQSDILTVTPYRDQHGHRILI 124
Query: 455 HRDGVWNLQNEVTKERTANATYAL 526
+R G+W N+VT + AT L
Sbjct: 125 YRFGLWR-PNQVTVDDIFRATIVL 147
>AY069774-1|AAL39919.1| 299|Drosophila melanogaster SD01558p
protein.
Length = 299
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 281 RAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMAGFECRILPKCRSQHEE--LS 454
RA +W I+N + ++ S Y K P L ++ + + R QH L
Sbjct: 74 RARYWKIENSYKLLCSYYRFREQNKSFYEKVRPLDLRHVGQSDILTVTPYRDQHGHRILI 133
Query: 455 HRDGVWNLQNEVTKERTANATYAL 526
+R G+W N+VT + AT L
Sbjct: 134 YRFGLWR-PNQVTVDDIFRATIVL 156
>AE014134-3103|AAN11044.1| 290|Drosophila melanogaster CG10026-PC,
isoform C protein.
Length = 290
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 281 RAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMAGFECRILPKCRSQHEE--LS 454
RA +W I+N + ++ S Y K P L ++ + + R QH L
Sbjct: 65 RARYWKIENSYKLLCSYYRFREQNKSFYEKVRPLDLRHVGQSDILTVTPYRDQHGHRILI 124
Query: 455 HRDGVWNLQNEVTKERTANATYAL 526
+R G+W N+VT + AT L
Sbjct: 125 YRFGLWR-PNQVTVDDIFRATIVL 147
>AE014134-3102|AAF53803.1| 290|Drosophila melanogaster CG10026-PA,
isoform A protein.
Length = 290
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 281 RAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMAGFECRILPKCRSQHEE--LS 454
RA +W I+N + ++ S Y K P L ++ + + R QH L
Sbjct: 65 RARYWKIENSYKLLCSYYRFREQNKSFYEKVRPLDLRHVGQSDILTVTPYRDQHGHRILI 124
Query: 455 HRDGVWNLQNEVTKERTANATYAL 526
+R G+W N+VT + AT L
Sbjct: 125 YRFGLWR-PNQVTVDDIFRATIVL 147
>AE014134-3101|AAN11043.2| 299|Drosophila melanogaster CG10026-PB,
isoform B protein.
Length = 299
Score = 29.1 bits (62), Expect = 6.6
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 281 RAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMAGFECRILPKCRSQHEE--LS 454
RA +W I+N + ++ S Y K P L ++ + + R QH L
Sbjct: 74 RARYWKIENSYKLLCSYYRFREQNKSFYEKVRPLDLRHVGQSDILTVTPYRDQHGHRILI 133
Query: 455 HRDGVWNLQNEVTKERTANATYAL 526
+R G+W N+VT + AT L
Sbjct: 134 YRFGLWR-PNQVTVDDIFRATIVL 156
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p protein.
Length = 1689
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKERTAN 511
K + +E S + + NLQ EVTK +T N
Sbjct: 1042 KAEGERKEKSFEESIKNLQEEVTKAKTEN 1070
>AY051492-1|AAK92916.1| 627|Drosophila melanogaster GH14707p
protein.
Length = 627
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 272 NLGRAVFWDIKNRLPRSVTTIQWENSFVS-VYSKDNPNLLFNMAGFECRIL 421
N+G FWD+ R + TI+++ + V+ D L ++A +C +L
Sbjct: 447 NMGNLEFWDLLMSHKRPILTIKYKYAVTHLVFKPDGTMLTVSLANGDCLML 497
>AL050231-7|CAB43324.1| 306|Drosophila melanogaster EG:BACR37P7.8
protein.
Length = 306
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 296 DIKNRLPRSVTTIQWENSFVSVYSKDNPNL 385
+++ SV T+ WEN FV + N N+
Sbjct: 173 EVEYATTESVVTVDWENGFVEASASSNENI 202
>AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule
binding protein D-CLIP-190 protein.
Length = 1690
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKERTAN 511
K + +E S + + NLQ EVTK +T N
Sbjct: 1043 KAEGERKEKSFEESIKNLQEEVTKAKTEN 1071
>AE014298-18|AAF45493.2| 306|Drosophila melanogaster CG13375-PA
protein.
Length = 306
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 296 DIKNRLPRSVTTIQWENSFVSVYSKDNPNL 385
+++ SV T+ WEN FV + N N+
Sbjct: 173 EVEYATTESVVTVDWENGFVEASASSNENI 202
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKERTAN 511
K + +E S + + NLQ EVTK +T N
Sbjct: 1005 KAEGERKEKSFEESIKNLQEEVTKAKTEN 1033
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKERTAN 511
K + +E S + + NLQ EVTK +T N
Sbjct: 1030 KAEGERKEKSFEESIKNLQEEVTKAKTEN 1058
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKERTAN 511
K + +E S + + NLQ EVTK +T N
Sbjct: 1042 KAEGERKEKSFEESIKNLQEEVTKAKTEN 1070
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKERTAN 511
K + +E S + + NLQ EVTK +T N
Sbjct: 1043 KAEGERKEKSFEESIKNLQEEVTKAKTEN 1071
>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
isoform A protein.
Length = 2190
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 362 YSKDNPNLLFNMAGFECRILPKCRSQHEELSHRD 463
Y K+ P NM+ +E R + +C + HE+LS D
Sbjct: 1031 YDKEFPCYKLNMSFYERRRIEECYTVHEDLSDID 1064
>AE014134-2349|AAF53301.1| 627|Drosophila melanogaster CG10859-PA
protein.
Length = 627
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 272 NLGRAVFWDIKNRLPRSVTTIQWENSFVS-VYSKDNPNLLFNMAGFECRIL 421
N+G FWD+ R + TI+++ + V+ D L ++A +C +L
Sbjct: 447 NMGNLEFWDLLMSHKRPILTIKYKYAVTHLVFKPDGTMLTVSLANGDCLML 497
>AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-PA
protein.
Length = 2291
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKERTANA--TYALMTNP 538
KC SQ ++ + N+QN V ++ +NA + LM NP
Sbjct: 1682 KCASQQKQAQQMKSLANVQNPVPRQSNSNAPESTVLMPNP 1721
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,224,173
Number of Sequences: 53049
Number of extensions: 726565
Number of successful extensions: 1695
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -