Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20797
(738 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 0.56
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 0.56
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 0.56
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.56
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 0.56
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 25 0.56
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.56
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.56
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 24 1.3
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.3
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 2.3
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 3.0
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 5.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 6.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 6.9
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKE 499
+ R++ E L HR VW +Q E +E
Sbjct: 28 RSRTKEERLQHRREVWLIQQERERE 52
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKE 499
+ R++ E L HR VW +Q E +E
Sbjct: 28 RSRTKEERLQHRREVWLIQQERERE 52
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKE 499
+ R++ E L HR VW +Q E +E
Sbjct: 28 RSRTKEERLQHRREVWLIQQERERE 52
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKE 499
+ R++ E L HR VW +Q E +E
Sbjct: 28 RSRTKEERLQHRREVWLIQQERERE 52
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKE 499
+ R++ E L HR VW +Q E +E
Sbjct: 28 RSRTKEERLQHRREVWLIQQERERE 52
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKE 499
+ R++ E L HR VW +Q E +E
Sbjct: 28 RSRTKEERLQHRREVWLIQQERERE 52
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKE 499
+ R++ E L HR VW +Q E +E
Sbjct: 28 RSRTKEERLQHRREVWLIQQERERE 52
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.4 bits (53), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 425 KCRSQHEELSHRDGVWNLQNEVTKE 499
+ R++ E L HR VW +Q E +E
Sbjct: 28 RSRTKEERLQHRREVWLIQQERERE 52
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 221 QKVLAKGCSYALMKHDVNLGRAVFWDIKNRLP 316
Q V+A+ + DV + R + W I +R+P
Sbjct: 352 QAVVARHDEAMIFPADVKINRGLXWIISDRMP 383
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 3 ASEMAGPPQLPNDFLSYQDRQTE 71
A E GPP +P D + +QTE
Sbjct: 328 ARENPGPPGVPGDHGDHAPKQTE 350
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 3 ASEMAGPPQLPNDFLSYQDRQTE 71
A E GPP +P D + +QTE
Sbjct: 328 ARENPGPPGVPGDHGDHAPKQTE 350
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 566 KSLWLPDQRPLPKSSINGILLLLV 637
+S+ + D PL ++++G+L+LLV
Sbjct: 987 ESIMVSDYLPLVAATLSGVLVLLV 1010
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.4 bits (48), Expect = 2.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 562 RQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDL 690
+Q+LMASG T +++ FR A ++L DL
Sbjct: 245 KQVLMASGELELTLRIHRGGGTNTDARHLFRTASSTPEDLQDL 287
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 1 EPVRWLAHHNCLMTSFHTKIVRQ 69
EP+ + H+NCL T+I +Q
Sbjct: 289 EPLTTIQHNNCLTRIPSTRINKQ 311
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 326 TTIQWENSFVSVYSKDNPNLL 388
T QW+NS + +SK NLL
Sbjct: 414 TPFQWDNSINAGFSKIAENLL 434
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 535 IRHQRVSSICCALFG 491
+ HQ + IC ALFG
Sbjct: 94 VPHQFIKRICSALFG 108
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 192 NNENIVGYNNKKCW 233
NN N YNNKK +
Sbjct: 314 NNNNYNNYNNKKLY 327
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 3 ASEMAGPPQLPNDFLSYQDRQT 68
A E GPP +P D + +QT
Sbjct: 267 ARENPGPPGVPGDHGDHAPKQT 288
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,898
Number of Sequences: 438
Number of extensions: 5032
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -